EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000013731 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 55982 bases
Position: chrJH603187.1:7452026-7508007
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000014329	R3H	PF01424.22	8.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000014388	R3HDM1-201	8472	-	ENSFALP00000014329	1166 (aa)	-	U3KH25

Gene Model

Click here to download ENSFALG00000013731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000013731	R3HDM1	64	52.799	ENSFALG00000010928	ARPP21	92	54.239
ENSFALG00000013731	R3HDM1	71	62.678	ENSFALG00000000255	R3HDM2	82	56.790

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013731	R3HDM1	93	67.056	ENSG00000048991	R3HDM1	99	79.798	Homo_sapiens
ENSFALG00000013731	R3HDM1	90	46.410	ENSAPOG00000020850	r3hdm1	81	51.774	Acanthochromis_polyacanthus
ENSFALG00000013731	R3HDM1	72	72.875	ENSAMEG00000014886	R3HDM1	75	72.526	Ailuropoda_melanoleuca
ENSFALG00000013731	R3HDM1	90	45.694	ENSAOCG00000005192	r3hdm1	84	50.831	Amphiprion_ocellaris
ENSFALG00000013731	R3HDM1	90	43.471	ENSAPEG00000016108	r3hdm1	83	48.013	Amphiprion_percula
ENSFALG00000013731	R3HDM1	90	42.770	ENSATEG00000000232	r3hdm1	83	47.299	Anabas_testudineus
ENSFALG00000013731	R3HDM1	95	79.118	ENSAPLG00000015231	R3HDM1	74	84.123	Anas_platyrhynchos
ENSFALG00000013731	R3HDM1	93	74.887	ENSACAG00000001676	R3HDM1	75	79.859	Anolis_carolinensis
ENSFALG00000013731	R3HDM1	72	73.140	ENSANAG00000035334	R3HDM1	76	73.256	Aotus_nancymaae
ENSFALG00000013731	R3HDM1	82	44.163	ENSACLG00000027282	r3hdm1	78	49.312	Astatotilapia_calliptera
ENSFALG00000013731	R3HDM1	61	37.838	ENSAMXG00000020587	arpp21	84	57.724	Astyanax_mexicanus
ENSFALG00000013731	R3HDM1	86	61.860	ENSAMXG00000003536	r3hdm1	75	56.106	Astyanax_mexicanus
ENSFALG00000013731	R3HDM1	86	70.983	ENSAMXG00000012861	R3HDM1	76	65.046	Astyanax_mexicanus
ENSFALG00000013731	R3HDM1	93	69.910	ENSBTAG00000013302	R3HDM1	91	67.027	Bos_taurus
ENSFALG00000013731	R3HDM1	93	61.484	ENSCJAG00000011718	R3HDM1	75	73.193	Callithrix_jacchus
ENSFALG00000013731	R3HDM1	72	73.225	ENSCAFG00000005075	R3HDM1	75	72.875	Canis_familiaris
ENSFALG00000013731	R3HDM1	72	75.902	ENSCAFG00020016119	R3HDM1	99	79.412	Canis_lupus_dingo
ENSFALG00000013731	R3HDM1	93	70.487	ENSCHIG00000020851	R3HDM1	74	73.388	Capra_hircus
ENSFALG00000013731	R3HDM1	93	68.817	ENSCPOG00000012784	R3HDM1	95	80.795	Cavia_porcellus
ENSFALG00000013731	R3HDM1	72	72.177	ENSCCAG00000027199	R3HDM1	56	74.384	Cebus_capucinus
ENSFALG00000013731	R3HDM1	93	69.210	ENSCATG00000023642	R3HDM1	75	75.669	Cercocebus_atys
ENSFALG00000013731	R3HDM1	93	68.190	ENSCLAG00000007962	R3HDM1	100	77.409	Chinchilla_lanigera
ENSFALG00000013731	R3HDM1	93	69.031	ENSCSAG00000016356	R3HDM1	75	75.669	Chlorocebus_sabaeus
ENSFALG00000013731	R3HDM1	76	63.243	ENSCHOG00000013638	R3HDM1	81	63.243	Choloepus_hoffmanni
ENSFALG00000013731	R3HDM1	75	92.647	ENSCPBG00000009645	R3HDM1	72	82.700	Chrysemys_picta_bellii
ENSFALG00000013731	R3HDM1	86	75.430	ENSCANG00000034748	R3HDM1	56	75.369	Colobus_angolensis_palliatus
ENSFALG00000013731	R3HDM1	93	69.507	ENSCGRG00001012357	R3hdm1	90	69.058	Cricetulus_griseus_chok1gshd
ENSFALG00000013731	R3HDM1	93	69.507	ENSCGRG00000012080	R3hdm1	100	79.070	Cricetulus_griseus_crigri
ENSFALG00000013731	R3HDM1	71	44.627	ENSCSEG00000008944	r3hdm1	84	45.690	Cynoglossus_semilaevis
ENSFALG00000013731	R3HDM1	71	49.109	ENSCVAG00000007582	r3hdm1	84	49.556	Cyprinodon_variegatus
ENSFALG00000013731	R3HDM1	62	36.376	ENSDARG00000061081	arpp21	95	36.842	Danio_rerio
ENSFALG00000013731	R3HDM1	71	69.267	ENSDNOG00000000771	R3HDM1	75	68.837	Dasypus_novemcinctus
ENSFALG00000013731	R3HDM1	79	79.108	ENSETEG00000013606	R3HDM1	91	63.784	Echinops_telfairi
ENSFALG00000013731	R3HDM1	93	70.811	ENSEASG00005007392	R3HDM1	75	76.023	Equus_asinus_asinus
ENSFALG00000013731	R3HDM1	93	70.773	ENSECAG00000019114	R3HDM1	75	75.963	Equus_caballus
ENSFALG00000013731	R3HDM1	71	73.025	ENSEEUG00000012589	R3HDM1	78	72.059	Erinaceus_europaeus
ENSFALG00000013731	R3HDM1	70	59.817	ENSELUG00000004909	R3HDM1	76	60.205	Esox_lucius
ENSFALG00000013731	R3HDM1	87	46.654	ENSELUG00000014413	r3hdm1	91	47.882	Esox_lucius
ENSFALG00000013731	R3HDM1	93	61.470	ENSFCAG00000027113	R3HDM1	75	75.556	Felis_catus
ENSFALG00000013731	R3HDM1	93	67.832	ENSFDAG00000016478	R3HDM1	99	79.596	Fukomys_damarensis
ENSFALG00000013731	R3HDM1	90	44.287	ENSFHEG00000018713	r3hdm1	89	48.613	Fundulus_heteroclitus
ENSFALG00000013731	R3HDM1	53	67.100	ENSGMOG00000006042	-	74	69.444	Gadus_morhua
ENSFALG00000013731	R3HDM1	79	88.889	ENSGALG00000012246	R3HDM1	93	83.251	Gallus_gallus
ENSFALG00000013731	R3HDM1	75	48.912	ENSGAFG00000006203	r3hdm1	77	49.298	Gambusia_affinis
ENSFALG00000013731	R3HDM1	88	45.578	ENSGACG00000014925	r3hdm1	79	52.317	Gasterosteus_aculeatus
ENSFALG00000013731	R3HDM1	85	87.750	ENSGAGG00000007840	R3HDM1	75	81.604	Gopherus_agassizii
ENSFALG00000013731	R3HDM1	93	67.235	ENSGGOG00000008156	R3HDM1	86	71.744	Gorilla_gorilla
ENSFALG00000013731	R3HDM1	93	67.896	ENSHGLG00000015718	R3HDM1	99	79.228	Heterocephalus_glaber_female
ENSFALG00000013731	R3HDM1	93	67.716	ENSHGLG00100003184	-	100	77.741	Heterocephalus_glaber_male
ENSFALG00000013731	R3HDM1	57	61.290	ENSHGLG00100015374	-	90	60.544	Heterocephalus_glaber_male
ENSFALG00000013731	R3HDM1	63	45.660	ENSHCOG00000013366	r3hdm1	88	59.750	Hippocampus_comes
ENSFALG00000013731	R3HDM1	83	66.746	ENSIPUG00000001676	R3HDM1	99	58.728	Ictalurus_punctatus
ENSFALG00000013731	R3HDM1	81	65.278	ENSIPUG00000013629	r3hdm1	65	70.476	Ictalurus_punctatus
ENSFALG00000013731	R3HDM1	72	75.204	ENSSTOG00000007572	R3HDM1	99	81.250	Ictidomys_tridecemlineatus
ENSFALG00000013731	R3HDM1	89	70.189	ENSLACG00000005334	R3HDM1	73	75.597	Latimeria_chalumnae
ENSFALG00000013731	R3HDM1	72	75.991	ENSLAFG00000009065	R3HDM1	75	75.874	Loxodonta_africana
ENSFALG00000013731	R3HDM1	93	66.158	ENSMFAG00000030331	R3HDM1	75	73.108	Macaca_fascicularis
ENSFALG00000013731	R3HDM1	93	43.136	ENSMMUG00000009844	R3HDM1	75	72.875	Macaca_mulatta
ENSFALG00000013731	R3HDM1	93	66.068	ENSMNEG00000027793	R3HDM1	75	73.108	Macaca_nemestrina
ENSFALG00000013731	R3HDM1	93	66.158	ENSMLEG00000043189	R3HDM1	75	73.108	Mandrillus_leucophaeus
ENSFALG00000013731	R3HDM1	90	45.079	ENSMAMG00000004532	r3hdm1	84	49.503	Mastacembelus_armatus
ENSFALG00000013731	R3HDM1	90	44.806	ENSMZEG00005003157	r3hdm1	84	49.669	Maylandia_zebra
ENSFALG00000013731	R3HDM1	95	79.208	ENSMGAG00000012461	R3HDM1	74	84.242	Meleagris_gallopavo
ENSFALG00000013731	R3HDM1	93	69.231	ENSMAUG00000010315	R3hdm1	100	79.070	Mesocricetus_auratus
ENSFALG00000013731	R3HDM1	93	45.275	ENSMICG00000042655	-	59	73.892	Microcebus_murinus
ENSFALG00000013731	R3HDM1	86	74.201	ENSMICG00000005900	-	74	71.944	Microcebus_murinus
ENSFALG00000013731	R3HDM1	91	70.690	ENSMODG00000000923	R3HDM1	81	75.487	Monodelphis_domestica
ENSFALG00000013731	R3HDM1	94	43.919	ENSMALG00000009000	r3hdm1	76	48.673	Monopterus_albus
ENSFALG00000013731	R3HDM1	93	69.093	MGP_CAROLIEiJ_G0014543	R3hdm1	99	79.963	Mus_caroli
ENSFALG00000013731	R3HDM1	93	68.733	ENSMUSG00000056211	R3hdm1	99	79.963	Mus_musculus
ENSFALG00000013731	R3HDM1	93	69.003	MGP_PahariEiJ_G0027779	R3hdm1	99	79.779	Mus_pahari
ENSFALG00000013731	R3HDM1	93	68.823	MGP_SPRETEiJ_G0015350	R3hdm1	99	79.963	Mus_spretus
ENSFALG00000013731	R3HDM1	72	72.929	ENSMPUG00000002412	R3HDM1	75	72.579	Mustela_putorius_furo
ENSFALG00000013731	R3HDM1	93	67.413	ENSMLUG00000013824	R3HDM1	75	72.158	Myotis_lucifugus
ENSFALG00000013731	R3HDM1	93	66.068	ENSNLEG00000008622	R3HDM1	75	73.077	Nomascus_leucogenys
ENSFALG00000013731	R3HDM1	90	59.082	ENSMEUG00000011784	R3HDM1	99	73.510	Notamacropus_eugenii
ENSFALG00000013731	R3HDM1	93	67.594	ENSODEG00000008607	R3HDM1	100	78.405	Octodon_degus
ENSFALG00000013731	R3HDM1	89	44.812	ENSONIG00000012017	r3hdm1	74	49.882	Oreochromis_niloticus
ENSFALG00000013731	R3HDM1	93	70.860	ENSOANG00000007987	R3HDM1	75	74.883	Ornithorhynchus_anatinus
ENSFALG00000013731	R3HDM1	72	72.494	ENSOCUG00000017366	R3HDM1	82	72.378	Oryctolagus_cuniculus
ENSFALG00000013731	R3HDM1	90	44.464	ENSORLG00000004297	r3hdm1	84	49.162	Oryzias_latipes
ENSFALG00000013731	R3HDM1	90	44.732	ENSORLG00015017355	r3hdm1	84	49.327	Oryzias_latipes_hsok
ENSFALG00000013731	R3HDM1	72	73.014	ENSOGAG00000003136	R3HDM1	74	72.780	Otolemur_garnettii
ENSFALG00000013731	R3HDM1	93	68.112	ENSOARG00000010788	R3HDM1	74	73.474	Ovis_aries
ENSFALG00000013731	R3HDM1	93	66.935	ENSPPAG00000027858	R3HDM1	75	72.822	Pan_paniscus
ENSFALG00000013731	R3HDM1	93	60.407	ENSPPRG00000002626	R3HDM1	74	72.632	Panthera_pardus
ENSFALG00000013731	R3HDM1	93	61.470	ENSPTIG00000016581	R3HDM1	74	72.749	Panthera_tigris_altaica
ENSFALG00000013731	R3HDM1	93	66.846	ENSPTRG00000012494	R3HDM1	75	72.706	Pan_troglodytes
ENSFALG00000013731	R3HDM1	93	66.158	ENSPANG00000026448	R3HDM1	75	73.108	Papio_anubis
ENSFALG00000013731	R3HDM1	85	66.501	ENSPKIG00000004328	r3hdm1	87	59.574	Paramormyrops_kingsleyae
ENSFALG00000013731	R3HDM1	93	69.691	ENSPSIG00000012915	R3HDM1	74	79.502	Pelodiscus_sinensis
ENSFALG00000013731	R3HDM1	93	69.093	ENSPEMG00000015187	R3hdm1	100	78.738	Peromyscus_maniculatus_bairdii
ENSFALG00000013731	R3HDM1	93	72.809	ENSPCIG00000002491	R3HDM1	75	78.286	Phascolarctos_cinereus
ENSFALG00000013731	R3HDM1	90	44.602	ENSPFOG00000015036	r3hdm1	84	49.109	Poecilia_formosa
ENSFALG00000013731	R3HDM1	81	44.083	ENSPLAG00000018042	r3hdm1	76	49.233	Poecilia_latipinna
ENSFALG00000013731	R3HDM1	81	44.028	ENSPMEG00000023947	r3hdm1	76	48.912	Poecilia_mexicana
ENSFALG00000013731	R3HDM1	90	44.484	ENSPREG00000007902	r3hdm1	92	61.086	Poecilia_reticulata
ENSFALG00000013731	R3HDM1	93	58.730	ENSPPYG00000012815	R3HDM1	75	71.860	Pongo_abelii
ENSFALG00000013731	R3HDM1	82	80.000	ENSPCAG00000006208	R3HDM1	85	80.000	Procavia_capensis
ENSFALG00000013731	R3HDM1	72	69.106	ENSPCOG00000012698	R3HDM1	74	68.873	Propithecus_coquereli
ENSFALG00000013731	R3HDM1	84	68.852	ENSPVAG00000006098	R3HDM1	88	69.189	Pteropus_vampyrus
ENSFALG00000013731	R3HDM1	61	38.688	ENSPNAG00000004162	arpp21	91	36.118	Pygocentrus_nattereri
ENSFALG00000013731	R3HDM1	88	57.454	ENSPNAG00000013952	r3hdm1	92	64.085	Pygocentrus_nattereri
ENSFALG00000013731	R3HDM1	86	75.676	ENSRROG00000034534	R3HDM1	75	73.023	Rhinopithecus_roxellana
ENSFALG00000013731	R3HDM1	72	72.410	ENSSBOG00000020389	R3HDM1	75	72.759	Saimiri_boliviensis_boliviensis
ENSFALG00000013731	R3HDM1	93	70.833	ENSSHAG00000016999	R3HDM1	91	76.757	Sarcophilus_harrisii
ENSFALG00000013731	R3HDM1	93	55.585	ENSSFOG00015019851	-	97	60.343	Scleropages_formosus
ENSFALG00000013731	R3HDM1	87	69.186	ENSSFOG00015014134	r3hdm1	93	59.766	Scleropages_formosus
ENSFALG00000013731	R3HDM1	90	42.450	ENSSDUG00000010749	r3hdm1	84	47.149	Seriola_dumerili
ENSFALG00000013731	R3HDM1	93	43.243	ENSSLDG00000004499	r3hdm1	75	48.230	Seriola_lalandi_dorsalis
ENSFALG00000013731	R3HDM1	90	44.259	ENSSPAG00000004648	r3hdm1	85	48.953	Stegastes_partitus
ENSFALG00000013731	R3HDM1	93	70.773	ENSSSCG00000015692	R3HDM1	91	74.446	Sus_scrofa
ENSFALG00000013731	R3HDM1	88	91.404	ENSTGUG00000011750	R3HDM1	93	91.268	Taeniopygia_guttata
ENSFALG00000013731	R3HDM1	81	42.512	ENSTRUG00000011654	r3hdm1	77	47.342	Takifugu_rubripes
ENSFALG00000013731	R3HDM1	88	42.272	ENSTNIG00000010362	r3hdm1	81	47.456	Tetraodon_nigroviridis
ENSFALG00000013731	R3HDM1	93	58.670	ENSTTRG00000003935	R3HDM1	91	69.871	Tursiops_truncatus
ENSFALG00000013731	R3HDM1	68	72.660	ENSUAMG00000024806	R3HDM1	99	78.860	Ursus_americanus
ENSFALG00000013731	R3HDM1	93	68.224	ENSUMAG00000005552	R3HDM1	92	67.874	Ursus_maritimus
ENSFALG00000013731	R3HDM1	87	56.609	ENSVPAG00000007333	R3HDM1	84	70.432	Vicugna_pacos
ENSFALG00000013731	R3HDM1	93	57.774	ENSVVUG00000006457	R3HDM1	75	75.641	Vulpes_vulpes
ENSFALG00000013731	R3HDM1	91	60.817	ENSXETG00000019330	r3hdm1	99	64.982	Xenopus_tropicalis
ENSFALG00000013731	R3HDM1	62	47.436	ENSXCOG00000017448	r3hdm1	91	48.465	Xiphophorus_couchianus
ENSFALG00000013731	R3HDM1	90	44.198	ENSXMAG00000007885	r3hdm1	84	49.833	Xiphophorus_maculatus