EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000013874 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 21837 bases
Position: chrJH603187.1:12505118-12526954
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000014478	Rif1_N	PF12231.8	5.9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000014538	RIF1-201	6261	-	ENSFALP00000014478	2086 (aa)	-	U3KHH4

Gene Model

Click here to download ENSFALG00000013874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013874's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013874	RIF1	91	64.329	ENSG00000080345	RIF1	80	69.527	Homo_sapiens
ENSFALG00000013874	RIF1	68	50.799	ENSAPOG00000011073	rif1	60	50.665	Acanthochromis_polyacanthus
ENSFALG00000013874	RIF1	91	64.939	ENSAMEG00000008461	RIF1	78	64.329	Ailuropoda_melanoleuca
ENSFALG00000013874	RIF1	74	51.213	ENSAOCG00000017231	rif1	65	47.724	Amphiprion_ocellaris
ENSFALG00000013874	RIF1	76	58.007	ENSAPEG00000013228	rif1	63	58.007	Amphiprion_percula
ENSFALG00000013874	RIF1	66	52.465	ENSATEG00000022887	rif1	62	52.081	Anabas_testudineus
ENSFALG00000013874	RIF1	99	67.132	ENSAPLG00000007092	RIF1	94	67.085	Anas_platyrhynchos
ENSFALG00000013874	RIF1	99	49.528	ENSACAG00000003714	RIF1	70	50.856	Anolis_carolinensis
ENSFALG00000013874	RIF1	90	65.615	ENSANAG00000024840	RIF1	77	65.300	Aotus_nancymaae
ENSFALG00000013874	RIF1	91	53.475	ENSAMXG00000010910	rif1	58	53.290	Astyanax_mexicanus
ENSFALG00000013874	RIF1	89	64.744	ENSBTAG00000021020	RIF1	81	64.103	Bos_taurus
ENSFALG00000013874	RIF1	90	64.742	ENSCJAG00000003138	RIF1	78	64.438	Callithrix_jacchus
ENSFALG00000013874	RIF1	91	63.720	ENSCAFG00000005670	RIF1	75	63.720	Canis_familiaris
ENSFALG00000013874	RIF1	91	64.024	ENSCAFG00020016401	RIF1	79	63.720	Canis_lupus_dingo
ENSFALG00000013874	RIF1	91	62.805	ENSCHIG00000020327	RIF1	78	62.500	Capra_hircus
ENSFALG00000013874	RIF1	91	61.517	ENSTSYG00000008861	RIF1	79	60.955	Carlito_syrichta
ENSFALG00000013874	RIF1	78	59.615	ENSCAPG00000008957	RIF1	88	58.974	Cavia_aperea
ENSFALG00000013874	RIF1	90	65.064	ENSCPOG00000037898	RIF1	78	64.423	Cavia_porcellus
ENSFALG00000013874	RIF1	93	60.490	ENSCCAG00000024760	RIF1	79	59.946	Cebus_capucinus
ENSFALG00000013874	RIF1	90	64.024	ENSCATG00000033353	RIF1	77	63.720	Cercocebus_atys
ENSFALG00000013874	RIF1	94	54.156	ENSCLAG00000001517	RIF1	84	54.156	Chinchilla_lanigera
ENSFALG00000013874	RIF1	89	64.634	ENSCSAG00000016089	RIF1	77	64.024	Chlorocebus_sabaeus
ENSFALG00000013874	RIF1	95	81.481	ENSCHOG00000007187	RIF1	73	81.481	Choloepus_hoffmanni
ENSFALG00000013874	RIF1	92	75.313	ENSCPBG00000025885	RIF1	92	75.313	Chrysemys_picta_bellii
ENSFALG00000013874	RIF1	86	72.072	ENSCANG00000028962	RIF1	77	71.171	Colobus_angolensis_palliatus
ENSFALG00000013874	RIF1	89	62.696	ENSCGRG00001024589	Rif1	76	65.064	Cricetulus_griseus_chok1gshd
ENSFALG00000013874	RIF1	98	51.770	ENSCGRG00000010713	Rif1	77	65.064	Cricetulus_griseus_crigri
ENSFALG00000013874	RIF1	51	51.679	ENSCSEG00000003945	rif1	57	54.264	Cynoglossus_semilaevis
ENSFALG00000013874	RIF1	70	48.444	ENSCVAG00000022479	rif1	64	48.033	Cyprinodon_variegatus
ENSFALG00000013874	RIF1	73	51.084	ENSDARG00000062650	rif1	63	50.464	Danio_rerio
ENSFALG00000013874	RIF1	89	64.984	ENSDNOG00000011194	RIF1	74	64.353	Dasypus_novemcinctus
ENSFALG00000013874	RIF1	69	57.972	ENSETEG00000012421	RIF1	64	58.525	Echinops_telfairi
ENSFALG00000013874	RIF1	95	87.634	ENSEASG00005023434	RIF1	78	87.634	Equus_asinus_asinus
ENSFALG00000013874	RIF1	92	73.156	ENSECAG00000012679	RIF1	77	73.156	Equus_caballus
ENSFALG00000013874	RIF1	66	52.979	ENSELUG00000006826	rif1	50	52.742	Esox_lucius
ENSFALG00000013874	RIF1	89	64.725	ENSFCAG00000029742	RIF1	76	64.401	Felis_catus
ENSFALG00000013874	RIF1	90	65.372	ENSFDAG00000006538	RIF1	77	65.372	Fukomys_damarensis
ENSFALG00000013874	RIF1	64	52.571	ENSFHEG00000013721	rif1	58	51.562	Fundulus_heteroclitus
ENSFALG00000013874	RIF1	56	51.078	ENSGMOG00000003517	rif1	71	50.984	Gadus_morhua
ENSFALG00000013874	RIF1	100	66.512	ENSGALG00000012484	RIF1	99	66.435	Gallus_gallus
ENSFALG00000013874	RIF1	66	55.048	ENSGAFG00000017196	rif1	59	55.154	Gambusia_affinis
ENSFALG00000013874	RIF1	62	57.143	ENSGACG00000008579	rif1	59	54.918	Gasterosteus_aculeatus
ENSFALG00000013874	RIF1	99	67.760	ENSGAGG00000012595	RIF1	87	68.033	Gopherus_agassizii
ENSFALG00000013874	RIF1	80	73.180	ENSGGOG00000040178	RIF1	73	73.180	Gorilla_gorilla
ENSFALG00000013874	RIF1	52	52.931	ENSHBUG00000007125	rif1	59	46.583	Haplochromis_burtoni
ENSFALG00000013874	RIF1	86	60.377	ENSHGLG00100009807	RIF1	77	60.377	Heterocephalus_glaber_male
ENSFALG00000013874	RIF1	65	50.977	ENSHCOG00000015943	rif1	52	50.556	Hippocampus_comes
ENSFALG00000013874	RIF1	91	54.294	ENSIPUG00000021703	rif1	58	53.903	Ictalurus_punctatus
ENSFALG00000013874	RIF1	98	51.566	ENSSTOG00000020712	RIF1	77	63.415	Ictidomys_tridecemlineatus
ENSFALG00000013874	RIF1	91	64.353	ENSJJAG00000023000	Rif1	80	63.722	Jaculus_jaculus
ENSFALG00000013874	RIF1	63	53.889	ENSLBEG00000023196	rif1	60	49.827	Labrus_bergylta
ENSFALG00000013874	RIF1	74	60.922	ENSLACG00000005425	RIF1	84	59.003	Latimeria_chalumnae
ENSFALG00000013874	RIF1	93	57.196	ENSLOCG00000002657	rif1	82	51.198	Lepisosteus_oculatus
ENSFALG00000013874	RIF1	97	52.125	ENSLAFG00000009796	RIF1	78	58.021	Loxodonta_africana
ENSFALG00000013874	RIF1	90	64.634	ENSMFAG00000032233	RIF1	77	64.024	Macaca_fascicularis
ENSFALG00000013874	RIF1	90	64.634	ENSMMUG00000008611	RIF1	77	64.024	Macaca_mulatta
ENSFALG00000013874	RIF1	91	64.634	ENSMNEG00000031616	RIF1	78	64.024	Macaca_nemestrina
ENSFALG00000013874	RIF1	90	64.329	ENSMLEG00000042945	RIF1	77	63.720	Mandrillus_leucophaeus
ENSFALG00000013874	RIF1	60	52.137	ENSMAMG00000001745	rif1	58	50.092	Mastacembelus_armatus
ENSFALG00000013874	RIF1	52	52.936	ENSMZEG00005020920	rif1	51	53.821	Maylandia_zebra
ENSFALG00000013874	RIF1	100	64.595	ENSMGAG00000012732	RIF1	94	64.457	Meleagris_gallopavo
ENSFALG00000013874	RIF1	84	90.164	ENSMAUG00000013158	Rif1	76	90.164	Mesocricetus_auratus
ENSFALG00000013874	RIF1	99	51.436	ENSMICG00000046127	RIF1	79	61.517	Microcebus_murinus
ENSFALG00000013874	RIF1	81	64.375	ENSMOCG00000009381	Rif1	78	64.062	Microtus_ochrogaster
ENSFALG00000013874	RIF1	65	50.568	ENSMMOG00000006519	rif1	57	50.378	Mola_mola
ENSFALG00000013874	RIF1	89	63.609	ENSMODG00000003703	RIF1	79	63.609	Monodelphis_domestica
ENSFALG00000013874	RIF1	70	48.596	ENSMALG00000016759	rif1	67	49.250	Monopterus_albus
ENSFALG00000013874	RIF1	91	61.631	MGP_CAROLIEiJ_G0023555	Rif1	79	61.631	Mus_caroli
ENSFALG00000013874	RIF1	91	62.048	ENSMUSG00000036202	Rif1	78	62.048	Mus_musculus
ENSFALG00000013874	RIF1	90	62.162	MGP_PahariEiJ_G0025006	Rif1	77	62.162	Mus_pahari
ENSFALG00000013874	RIF1	95	62.236	MGP_SPRETEiJ_G0024476	Rif1	79	62.236	Mus_spretus
ENSFALG00000013874	RIF1	91	64.634	ENSMPUG00000000371	RIF1	78	64.024	Mustela_putorius_furo
ENSFALG00000013874	RIF1	89	57.143	ENSMLUG00000003376	RIF1	82	63.110	Myotis_lucifugus
ENSFALG00000013874	RIF1	91	62.275	ENSNGAG00000009268	Rif1	80	62.275	Nannospalax_galili
ENSFALG00000013874	RIF1	69	50.711	ENSNBRG00000014257	rif1	66	49.375	Neolamprologus_brichardi
ENSFALG00000013874	RIF1	91	58.544	ENSNLEG00000010955	RIF1	77	58.544	Nomascus_leucogenys
ENSFALG00000013874	RIF1	93	73.333	ENSMEUG00000007601	-	75	73.333	Notamacropus_eugenii
ENSFALG00000013874	RIF1	91	65.190	ENSODEG00000003950	RIF1	77	65.190	Octodon_degus
ENSFALG00000013874	RIF1	51	53.475	ENSONIG00000013657	rif1	56	48.341	Oreochromis_niloticus
ENSFALG00000013874	RIF1	76	69.760	ENSOANG00000006078	-	67	69.760	Ornithorhynchus_anatinus
ENSFALG00000013874	RIF1	93	55.690	ENSOCUG00000017435	RIF1	77	64.329	Oryctolagus_cuniculus
ENSFALG00000013874	RIF1	50	52.376	ENSOMEG00000021513	rif1	61	51.048	Oryzias_melastigma
ENSFALG00000013874	RIF1	91	64.329	ENSOGAG00000006141	RIF1	78	64.329	Otolemur_garnettii
ENSFALG00000013874	RIF1	91	62.805	ENSOARG00000008930	RIF1	78	62.500	Ovis_aries
ENSFALG00000013874	RIF1	91	63.720	ENSPPAG00000023754	RIF1	78	63.110	Pan_paniscus
ENSFALG00000013874	RIF1	89	64.725	ENSPPRG00000003618	RIF1	76	64.401	Panthera_pardus
ENSFALG00000013874	RIF1	89	64.725	ENSPTIG00000020652	RIF1	76	64.401	Panthera_tigris_altaica
ENSFALG00000013874	RIF1	91	64.024	ENSPTRG00000012534	RIF1	78	63.415	Pan_troglodytes
ENSFALG00000013874	RIF1	90	64.634	ENSPANG00000008525	RIF1	77	64.024	Papio_anubis
ENSFALG00000013874	RIF1	65	47.278	ENSPMGG00000016141	rif1	66	47.143	Periophthalmus_magnuspinnatus
ENSFALG00000013874	RIF1	95	63.284	ENSPEMG00000000446	Rif1	80	63.284	Peromyscus_maniculatus_bairdii
ENSFALG00000013874	RIF1	98	52.761	ENSPCIG00000009185	RIF1	82	60.541	Phascolarctos_cinereus
ENSFALG00000013874	RIF1	67	49.012	ENSPLAG00000017945	rif1	60	48.918	Poecilia_latipinna
ENSFALG00000013874	RIF1	66	55.851	ENSPREG00000018052	rif1	57	53.271	Poecilia_reticulata
ENSFALG00000013874	RIF1	91	64.329	ENSPPYG00000012846	RIF1	78	63.720	Pongo_abelii
ENSFALG00000013874	RIF1	69	67.424	ENSPCAG00000009032	RIF1	58	67.424	Procavia_capensis
ENSFALG00000013874	RIF1	92	62.079	ENSPCOG00000027888	RIF1	79	61.517	Propithecus_coquereli
ENSFALG00000013874	RIF1	83	76.656	ENSPVAG00000014276	RIF1	73	76.656	Pteropus_vampyrus
ENSFALG00000013874	RIF1	68	54.494	ENSPNAG00000016685	rif1	58	54.401	Pygocentrus_nattereri
ENSFALG00000013874	RIF1	91	62.883	ENSRNOG00000054901	Rif1	78	62.883	Rattus_norvegicus
ENSFALG00000013874	RIF1	91	64.939	ENSRBIG00000003704	RIF1	78	64.329	Rhinopithecus_bieti
ENSFALG00000013874	RIF1	91	64.939	ENSRROG00000028206	RIF1	78	64.329	Rhinopithecus_roxellana
ENSFALG00000013874	RIF1	99	49.939	ENSSBOG00000029530	RIF1	82	59.946	Saimiri_boliviensis_boliviensis
ENSFALG00000013874	RIF1	93	58.586	ENSSHAG00000018552	RIF1	84	64.329	Sarcophilus_harrisii
ENSFALG00000013874	RIF1	66	52.876	ENSSMAG00000011704	rif1	59	52.218	Scophthalmus_maximus
ENSFALG00000013874	RIF1	50	54.095	ENSSDUG00000015632	rif1	73	48.889	Seriola_dumerili
ENSFALG00000013874	RIF1	65	54.383	ENSSLDG00000019531	rif1	64	49.030	Seriola_lalandi_dorsalis
ENSFALG00000013874	RIF1	99	55.338	ENSSPUG00000003062	RIF1	94	55.168	Sphenodon_punctatus
ENSFALG00000013874	RIF1	50	64.780	ENSSPAG00000018359	rif1	66	64.780	Stegastes_partitus
ENSFALG00000013874	RIF1	99	64.329	ENSSSCG00000016395	RIF1	78	64.329	Sus_scrofa
ENSFALG00000013874	RIF1	50	51.750	ENSTNIG00000011538	rif1	58	44.813	Tetraodon_nigroviridis
ENSFALG00000013874	RIF1	71	70.732	ENSTBEG00000016082	RIF1	58	70.732	Tupaia_belangeri
ENSFALG00000013874	RIF1	94	57.750	ENSTTRG00000011190	RIF1	81	56.391	Tursiops_truncatus
ENSFALG00000013874	RIF1	87	64.939	ENSUAMG00000026385	RIF1	82	64.329	Ursus_americanus
ENSFALG00000013874	RIF1	91	64.939	ENSUMAG00000000337	RIF1	78	64.329	Ursus_maritimus
ENSFALG00000013874	RIF1	90	65.064	ENSVPAG00000002162	RIF1	69	65.064	Vicugna_pacos
ENSFALG00000013874	RIF1	98	64.024	ENSVVUG00000011293	RIF1	79	63.720	Vulpes_vulpes
ENSFALG00000013874	RIF1	99	60.054	ENSXETG00000004530	rif1	78	59.783	Xenopus_tropicalis