EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000013881 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B1-like
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 14424 bases
Position: chrJH603288.1:1584602-1599025
Accession: 101814060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000014484	RRM_5	PF13893.6	6.2e-08	1	1
ENSFALP00000014484	RRM_1	PF00076.22	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000014545	-	3355	-	ENSFALP00000014484	872 (aa)	XP_016160001	U3KHI0

Gene Model

Click here to download ENSFALG00000013881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000013881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000013881	-	99	74.205	ENSFALG00000013882	-	83	73.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000013881	-	99	60.722	ENSG00000160633	SAFB	91	59.842	Homo_sapiens
ENSFALG00000013881	-	68	59.160	ENSAMEG00000012254	SAFB	58	59.750	Ailuropoda_melanoleuca
ENSFALG00000013881	-	98	43.454	ENSATEG00000004998	safb	56	40.747	Anabas_testudineus
ENSFALG00000013881	-	99	70.762	ENSAPLG00000005780	-	97	70.648	Anas_platyrhynchos
ENSFALG00000013881	-	96	82.938	ENSAPLG00000006355	-	96	83.353	Anas_platyrhynchos
ENSFALG00000013881	-	84	57.647	ENSACAG00000016893	-	71	55.497	Anolis_carolinensis
ENSFALG00000013881	-	99	61.218	ENSANAG00000028821	SAFB	90	62.500	Aotus_nancymaae
ENSFALG00000013881	-	92	49.204	ENSAMXG00000018154	safb	55	44.964	Astyanax_mexicanus
ENSFALG00000013881	-	99	61.155	ENSBTAG00000007875	SAFB	58	59.358	Bos_taurus
ENSFALG00000013881	-	83	63.230	ENSCJAG00000017081	SAFB	99	62.657	Callithrix_jacchus
ENSFALG00000013881	-	99	60.879	ENSCAFG00000018803	SAFB	50	60.536	Canis_familiaris
ENSFALG00000013881	-	99	60.879	ENSCAFG00020018943	SAFB	91	60.476	Canis_lupus_dingo
ENSFALG00000013881	-	99	60.815	ENSCHIG00000007262	SAFB	58	58.824	Capra_hircus
ENSFALG00000013881	-	99	57.921	ENSCAPG00000012121	SAFB	94	55.825	Cavia_aperea
ENSFALG00000013881	-	63	55.382	ENSCPOG00000026322	SAFB	91	56.575	Cavia_porcellus
ENSFALG00000013881	-	99	62.007	ENSCCAG00000020193	SAFB	90	62.500	Cebus_capucinus
ENSFALG00000013881	-	99	61.894	ENSCATG00000029994	SAFB	90	60.714	Cercocebus_atys
ENSFALG00000013881	-	99	60.576	ENSCLAG00000007734	SAFB	91	59.000	Chinchilla_lanigera
ENSFALG00000013881	-	99	61.781	ENSCSAG00000009949	SAFB	91	59.683	Chlorocebus_sabaeus
ENSFALG00000013881	-	83	56.676	ENSCHOG00000003208	SAFB	81	55.571	Choloepus_hoffmanni
ENSFALG00000013881	-	99	69.056	ENSCPBG00000010928	-	99	68.907	Chrysemys_picta_bellii
ENSFALG00000013881	-	100	81.818	ENSCPBG00000010936	-	99	81.932	Chrysemys_picta_bellii
ENSFALG00000013881	-	95	63.462	ENSCANG00000004774	-	89	63.235	Colobus_angolensis_palliatus
ENSFALG00000013881	-	99	57.770	ENSCANG00000019754	-	57	55.714	Colobus_angolensis_palliatus
ENSFALG00000013881	-	64	54.530	ENSCGRG00001002254	Safb	93	53.645	Cricetulus_griseus_chok1gshd
ENSFALG00000013881	-	63	51.913	ENSCGRG00000011529	Safb	96	53.043	Cricetulus_griseus_crigri
ENSFALG00000013881	-	99	61.695	ENSDNOG00000015746	SAFB	92	59.618	Dasypus_novemcinctus
ENSFALG00000013881	-	64	57.785	ENSDORG00000016200	Safb	59	57.391	Dipodomys_ordii
ENSFALG00000013881	-	71	70.046	ENSETEG00000018679	SAFB	71	64.126	Echinops_telfairi
ENSFALG00000013881	-	99	58.923	ENSEASG00005023019	SAFB	91	58.512	Equus_asinus_asinus
ENSFALG00000013881	-	64	58.792	ENSECAG00000018659	SAFB	81	59.230	Equus_caballus
ENSFALG00000013881	-	96	46.936	ENSELUG00000022327	safb	64	52.752	Esox_lucius
ENSFALG00000013881	-	99	60.609	ENSFCAG00000011835	SAFB	91	60.204	Felis_catus
ENSFALG00000013881	-	99	57.143	ENSFDAG00000020306	SAFB	88	56.846	Fukomys_damarensis
ENSFALG00000013881	-	98	41.190	ENSGMOG00000014280	safb	56	38.609	Gadus_morhua
ENSFALG00000013881	-	100	84.773	ENSGALG00000001948	-	91	85.341	Gallus_gallus
ENSFALG00000013881	-	99	71.477	ENSGALG00000013365	-	91	70.762	Gallus_gallus
ENSFALG00000013881	-	97	45.341	ENSGACG00000011385	safb	57	39.964	Gasterosteus_aculeatus
ENSFALG00000013881	-	78	66.521	ENSGAGG00000017702	-	98	64.243	Gopherus_agassizii
ENSFALG00000013881	-	95	83.194	ENSGAGG00000008424	-	90	83.413	Gopherus_agassizii
ENSFALG00000013881	-	99	60.452	ENSGGOG00000015109	SAFB	91	59.842	Gorilla_gorilla
ENSFALG00000013881	-	64	57.886	ENSHGLG00000015883	SAFB	91	57.350	Heterocephalus_glaber_female
ENSFALG00000013881	-	64	57.886	ENSHGLG00100004228	SAFB	64	57.913	Heterocephalus_glaber_male
ENSFALG00000013881	-	92	42.579	ENSHCOG00000001705	safb	61	37.919	Hippocampus_comes
ENSFALG00000013881	-	64	59.445	ENSSTOG00000002783	SAFB	98	57.842	Ictidomys_tridecemlineatus
ENSFALG00000013881	-	64	56.048	ENSJJAG00000009021	Safb	92	55.568	Jaculus_jaculus
ENSFALG00000013881	-	92	45.985	ENSKMAG00000022308	safb	56	39.858	Kryptolebias_marmoratus
ENSFALG00000013881	-	97	45.679	ENSLBEG00000006015	safb	56	41.667	Labrus_bergylta
ENSFALG00000013881	-	99	56.326	ENSLACG00000018090	SAFB	94	51.819	Latimeria_chalumnae
ENSFALG00000013881	-	99	51.951	ENSLOCG00000003613	safb	66	46.967	Lepisosteus_oculatus
ENSFALG00000013881	-	97	61.066	ENSLAFG00000003840	SAFB	87	60.048	Loxodonta_africana
ENSFALG00000013881	-	99	61.894	ENSMFAG00000003885	SAFB	90	60.714	Macaca_fascicularis
ENSFALG00000013881	-	99	61.894	ENSMMUG00000017970	SAFB	90	60.714	Macaca_mulatta
ENSFALG00000013881	-	99	59.188	ENSMNEG00000035637	SAFB	90	61.538	Macaca_nemestrina
ENSFALG00000013881	-	99	58.352	ENSMLEG00000038637	SAFB	54	57.009	Mandrillus_leucophaeus
ENSFALG00000013881	-	96	44.213	ENSMAMG00000003357	safb	52	40.422	Mastacembelus_armatus
ENSFALG00000013881	-	92	47.579	ENSMZEG00005009120	safb	57	41.416	Maylandia_zebra
ENSFALG00000013881	-	88	76.056	ENSMGAG00000001051	-	90	74.522	Meleagris_gallopavo
ENSFALG00000013881	-	99	71.136	ENSMGAG00000001101	-	94	70.648	Meleagris_gallopavo
ENSFALG00000013881	-	83	54.694	ENSMICG00000046795	-	67	53.888	Microcebus_murinus
ENSFALG00000013881	-	99	61.061	ENSMICG00000008739	-	91	59.524	Microcebus_murinus
ENSFALG00000013881	-	64	54.017	ENSMOCG00000014040	Safb	91	54.264	Microtus_ochrogaster
ENSFALG00000013881	-	99	61.305	ENSMODG00000001236	SAFB	91	60.674	Monodelphis_domestica
ENSFALG00000013881	-	64	53.925	MGP_CAROLIEiJ_G0021780	Safb	91	54.696	Mus_caroli
ENSFALG00000013881	-	64	53.925	ENSMUSG00000071054	Safb	91	54.696	Mus_musculus
ENSFALG00000013881	-	63	53.688	MGP_PahariEiJ_G0020769	Safb	91	54.746	Mus_pahari
ENSFALG00000013881	-	99	60.992	ENSMPUG00000006123	SAFB	86	60.815	Mustela_putorius_furo
ENSFALG00000013881	-	99	62.120	ENSMLUG00000001081	SAFB	91	61.042	Myotis_lucifugus
ENSFALG00000013881	-	64	52.389	ENSNGAG00000019882	Safb	91	52.044	Nannospalax_galili
ENSFALG00000013881	-	96	61.803	ENSNLEG00000013551	SAFB	90	60.958	Nomascus_leucogenys
ENSFALG00000013881	-	64	55.615	ENSOPRG00000011561	-	97	57.263	Ochotona_princeps
ENSFALG00000013881	-	64	58.204	ENSODEG00000014838	SAFB	91	57.508	Octodon_degus
ENSFALG00000013881	-	99	55.278	ENSOCUG00000014628	SAFB	63	57.895	Oryctolagus_cuniculus
ENSFALG00000013881	-	92	44.920	ENSORLG00000016989	safb	56	40.787	Oryzias_latipes
ENSFALG00000013881	-	92	44.059	ENSORLG00020000404	safb	55	41.075	Oryzias_latipes_hni
ENSFALG00000013881	-	96	44.131	ENSORLG00015010733	safb	56	40.787	Oryzias_latipes_hsok
ENSFALG00000013881	-	92	44.322	ENSOMEG00000009066	safb	57	39.785	Oryzias_melastigma
ENSFALG00000013881	-	64	59.858	ENSOGAG00000027769	SAFB	91	56.689	Otolemur_garnettii
ENSFALG00000013881	-	99	58.437	ENSOARG00000007662	-	59	59.893	Ovis_aries
ENSFALG00000013881	-	84	57.959	ENSOARG00000007856	-	76	59.464	Ovis_aries
ENSFALG00000013881	-	99	61.894	ENSPPAG00000035129	SAFB	90	60.714	Pan_paniscus
ENSFALG00000013881	-	99	60.609	ENSPPRG00000017197	SAFB	91	60.204	Panthera_pardus
ENSFALG00000013881	-	99	61.894	ENSPTRG00000010335	SAFB	90	60.714	Pan_troglodytes
ENSFALG00000013881	-	99	61.105	ENSPANG00000007770	SAFB	91	59.343	Papio_anubis
ENSFALG00000013881	-	94	49.590	ENSPKIG00000009902	safb	59	46.010	Paramormyrops_kingsleyae
ENSFALG00000013881	-	100	79.886	ENSPSIG00000011679	-	97	79.886	Pelodiscus_sinensis
ENSFALG00000013881	-	99	68.468	ENSPSIG00000009367	-	91	67.077	Pelodiscus_sinensis
ENSFALG00000013881	-	64	54.717	ENSPEMG00000020428	Safb	91	54.967	Peromyscus_maniculatus_bairdii
ENSFALG00000013881	-	63	63.225	ENSPCIG00000009504	-	97	63.690	Phascolarctos_cinereus
ENSFALG00000013881	-	68	48.475	ENSPFOG00000007745	safb	64	40.035	Poecilia_formosa
ENSFALG00000013881	-	99	60.158	ENSPPYG00000009428	SAFB	91	59.729	Pongo_abelii
ENSFALG00000013881	-	99	57.030	ENSPCAG00000006475	SAFB	91	55.982	Procavia_capensis
ENSFALG00000013881	-	99	58.126	ENSPCOG00000014090	SAFB	58	58.244	Propithecus_coquereli
ENSFALG00000013881	-	99	56.674	ENSPVAG00000004913	SAFB	91	54.205	Pteropus_vampyrus
ENSFALG00000013881	-	65	58.131	ENSPNAG00000021838	safb	57	45.567	Pygocentrus_nattereri
ENSFALG00000013881	-	64	54.344	ENSRNOG00000050543	Safb	95	55.660	Rattus_norvegicus
ENSFALG00000013881	-	99	54.082	ENSRBIG00000042509	SAFB	89	57.895	Rhinopithecus_bieti
ENSFALG00000013881	-	99	61.781	ENSRROG00000029278	SAFB	90	60.714	Rhinopithecus_roxellana
ENSFALG00000013881	-	99	62.007	ENSSBOG00000026291	SAFB	90	62.500	Saimiri_boliviensis_boliviensis
ENSFALG00000013881	-	99	50.055	ENSSFOG00015008156	safb	58	45.502	Scleropages_formosus
ENSFALG00000013881	-	96	43.142	ENSSDUG00000009652	safb	59	40.429	Seriola_dumerili
ENSFALG00000013881	-	98	43.792	ENSSLDG00000001670	safb	56	40.497	Seriola_lalandi_dorsalis
ENSFALG00000013881	-	63	58.111	ENSSARG00000010475	SAFB	98	54.926	Sorex_araneus
ENSFALG00000013881	-	63	63.899	ENSSPUG00000009747	-	67	60.823	Sphenodon_punctatus
ENSFALG00000013881	-	90	77.904	ENSSPUG00000009820	-	97	78.827	Sphenodon_punctatus
ENSFALG00000013881	-	99	60.690	ENSSSCG00000013522	SAFB	89	60.729	Sus_scrofa
ENSFALG00000013881	-	96	73.790	ENSTGUG00000000502	-	90	73.109	Taeniopygia_guttata
ENSFALG00000013881	-	93	94.561	ENSTGUG00000000489	-	90	94.561	Taeniopygia_guttata
ENSFALG00000013881	-	92	44.551	ENSTRUG00000003567	safb	57	38.169	Takifugu_rubripes
ENSFALG00000013881	-	94	60.770	ENSTTRG00000013588	SAFB	52	59.252	Tursiops_truncatus
ENSFALG00000013881	-	84	60.904	ENSUAMG00000024543	SAFB	90	61.103	Ursus_americanus
ENSFALG00000013881	-	86	59.358	ENSUMAG00000009734	SAFB	80	58.497	Ursus_maritimus
ENSFALG00000013881	-	78	65.714	ENSVPAG00000012043	SAFB	57	73.043	Vicugna_pacos
ENSFALG00000013881	-	99	60.879	ENSVVUG00000013720	SAFB	50	60.714	Vulpes_vulpes
ENSFALG00000013881	-	64	48.654	ENSXETG00000008755	safb	90	53.524	Xenopus_tropicalis
ENSFALG00000013881	-	69	50.558	ENSXMAG00000003458	safb	50	53.481	Xiphophorus_maculatus