EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000000083 (Gene tree)
Gene ID: 101097799
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 9696 bases
Position: chrA2:53865081-53874776
Accession: 101097799
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000000077	MBD	PF01429.19	2.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000000084	MBD4-202	1716	XM_023250043	ENSFCAP00000000077	571 (aa)	XP_023105811	M3VU26
ENSFCAT00000052399	MBD4-201	1341	XM_019825112	ENSFCAP00000047005	262 (aa)	XP_019680671	UPI000DE7E866

Gene Model

Click here to download ENSFCAG00000000083's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000000083's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000000083	MBD4	99	79.275	ENSG00000129071	MBD4	99	79.565	Homo_sapiens
ENSFCAG00000000083	MBD4	100	85.464	ENSAMEG00000004562	MBD4	100	85.464	Ailuropoda_melanoleuca
ENSFCAG00000000083	MBD4	54	60.643	ENSAOCG00000001157	mbd4	62	60.643	Amphiprion_ocellaris
ENSFCAG00000000083	MBD4	85	42.116	ENSAPEG00000016131	mbd4	95	42.515	Amphiprion_percula
ENSFCAG00000000083	MBD4	86	43.281	ENSATEG00000014594	MBD4	87	43.281	Anabas_testudineus
ENSFCAG00000000083	MBD4	99	73.498	ENSBTAG00000021645	MBD4	100	73.498	Bos_taurus
ENSFCAG00000000083	MBD4	99	76.801	ENSCJAG00000017293	MBD4	99	76.801	Callithrix_jacchus
ENSFCAG00000000083	MBD4	99	84.183	ENSCAFG00000004867	MBD4	99	84.183	Canis_familiaris
ENSFCAG00000000083	MBD4	99	84.183	ENSCAFG00020007082	MBD4	99	84.183	Canis_lupus_dingo
ENSFCAG00000000083	MBD4	99	72.438	ENSCHIG00000009760	MBD4	100	72.438	Capra_hircus
ENSFCAG00000000083	MBD4	99	76.817	ENSCCAG00000029796	MBD4	99	76.817	Cebus_capucinus
ENSFCAG00000000083	MBD4	99	77.682	ENSCATG00000035211	MBD4	99	77.682	Cercocebus_atys
ENSFCAG00000000083	MBD4	94	71.795	ENSCLAG00000008974	MBD4	96	71.795	Chinchilla_lanigera
ENSFCAG00000000083	MBD4	99	76.817	ENSCSAG00000009037	MBD4	99	76.817	Chlorocebus_sabaeus
ENSFCAG00000000083	MBD4	86	51.657	ENSCPBG00000014704	MBD4	89	51.657	Chrysemys_picta_bellii
ENSFCAG00000000083	MBD4	99	77.163	ENSCANG00000007120	MBD4	99	77.163	Colobus_angolensis_palliatus
ENSFCAG00000000083	MBD4	99	65.905	ENSCGRG00001003507	Mbd4	100	66.257	Cricetulus_griseus_chok1gshd
ENSFCAG00000000083	MBD4	99	65.905	ENSCGRG00000010974	Mbd4	100	66.257	Cricetulus_griseus_crigri
ENSFCAG00000000083	MBD4	99	75.916	ENSDNOG00000049619	MBD4	100	75.916	Dasypus_novemcinctus
ENSFCAG00000000083	MBD4	80	64.026	ENSDORG00000000902	-	95	64.026	Dipodomys_ordii
ENSFCAG00000000083	MBD4	99	80.977	ENSEASG00005014800	MBD4	100	80.977	Equus_asinus_asinus
ENSFCAG00000000083	MBD4	99	80.628	ENSECAG00000022106	MBD4	100	80.628	Equus_caballus
ENSFCAG00000000083	MBD4	95	64.855	ENSEEUG00000011459	MBD4	99	64.855	Erinaceus_europaeus
ENSFCAG00000000083	MBD4	81	44.915	ENSFALG00000013663	MBD4	99	45.082	Ficedula_albicollis
ENSFCAG00000000083	MBD4	87	51.456	ENSGAGG00000018644	MBD4	89	51.456	Gopherus_agassizii
ENSFCAG00000000083	MBD4	99	78.238	ENSGGOG00000010698	MBD4	99	78.238	Gorilla_gorilla
ENSFCAG00000000083	MBD4	99	71.379	ENSHGLG00000009034	MBD4	100	71.379	Heterocephalus_glaber_female
ENSFCAG00000000083	MBD4	99	71.553	ENSHGLG00100000135	MBD4	100	71.553	Heterocephalus_glaber_male
ENSFCAG00000000083	MBD4	99	71.728	ENSSTOG00000020663	MBD4	100	71.728	Ictidomys_tridecemlineatus
ENSFCAG00000000083	MBD4	99	74.479	ENSLAFG00000010609	MBD4	99	74.479	Loxodonta_africana
ENSFCAG00000000083	MBD4	99	76.990	ENSMFAG00000002266	MBD4	99	76.990	Macaca_fascicularis
ENSFCAG00000000083	MBD4	99	76.552	ENSMMUG00000012723	MBD4	99	76.552	Macaca_mulatta
ENSFCAG00000000083	MBD4	96	75.632	ENSMNEG00000029752	MBD4	99	75.632	Macaca_nemestrina
ENSFCAG00000000083	MBD4	99	77.163	ENSMLEG00000024859	MBD4	99	77.163	Mandrillus_leucophaeus
ENSFCAG00000000083	MBD4	99	78.856	ENSMICG00000008022	MBD4	99	78.856	Microcebus_murinus
ENSFCAG00000000083	MBD4	66	50.000	ENSMOCG00000002466	-	95	50.000	Microtus_ochrogaster
ENSFCAG00000000083	MBD4	86	60.922	ENSMODG00000006399	-	99	60.922	Monodelphis_domestica
ENSFCAG00000000083	MBD4	99	65.913	MGP_CAROLIEiJ_G0028760	Mbd4	100	65.913	Mus_caroli
ENSFCAG00000000083	MBD4	99	66.435	ENSMUSG00000030322	Mbd4	100	66.435	Mus_musculus
ENSFCAG00000000083	MBD4	99	66.609	MGP_PahariEiJ_G0022511	-	100	66.609	Mus_pahari
ENSFCAG00000000083	MBD4	99	65.913	MGP_SPRETEiJ_G0029788	Mbd4	100	65.913	Mus_spretus
ENSFCAG00000000083	MBD4	99	83.627	ENSMPUG00000017195	MBD4	99	83.627	Mustela_putorius_furo
ENSFCAG00000000083	MBD4	94	83.026	ENSMLUG00000014766	MBD4	99	83.026	Myotis_lucifugus
ENSFCAG00000000083	MBD4	99	79.549	ENSNLEG00000005337	MBD4	99	79.549	Nomascus_leucogenys
ENSFCAG00000000083	MBD4	51	100.000	ENSMEUG00000015599	-	77	100.000	Notamacropus_eugenii
ENSFCAG00000000083	MBD4	100	63.903	ENSOPRG00000000473	MBD4	100	63.903	Ochotona_princeps
ENSFCAG00000000083	MBD4	72	44.444	ENSOANG00000004589	-	97	44.393	Ornithorhynchus_anatinus
ENSFCAG00000000083	MBD4	99	66.609	ENSOCUG00000013006	MBD4	100	66.609	Oryctolagus_cuniculus
ENSFCAG00000000083	MBD4	99	72.997	ENSOGAG00000010236	MBD4	100	72.997	Otolemur_garnettii
ENSFCAG00000000083	MBD4	99	72.968	ENSOARG00000014699	MBD4	100	72.968	Ovis_aries
ENSFCAG00000000083	MBD4	99	78.411	ENSPPAG00000036528	MBD4	99	78.411	Pan_paniscus
ENSFCAG00000000083	MBD4	100	96.673	ENSPPRG00000016480	MBD4	100	96.673	Panthera_pardus
ENSFCAG00000000083	MBD4	99	78.756	ENSPTRG00000015377	MBD4	99	78.756	Pan_troglodytes
ENSFCAG00000000083	MBD4	99	77.682	ENSPANG00000015047	MBD4	99	77.682	Papio_anubis
ENSFCAG00000000083	MBD4	87	50.857	ENSPSIG00000007892	MBD4	89	50.857	Pelodiscus_sinensis
ENSFCAG00000000083	MBD4	90	59.579	ENSPEMG00000006226	Mbd4	97	59.579	Peromyscus_maniculatus_bairdii
ENSFCAG00000000083	MBD4	89	58.527	ENSPCIG00000002276	-	98	58.527	Phascolarctos_cinereus
ENSFCAG00000000083	MBD4	99	78.374	ENSPPYG00000013417	MBD4	99	78.374	Pongo_abelii
ENSFCAG00000000083	MBD4	95	70.856	ENSPCAG00000012915	MBD4	99	70.856	Procavia_capensis
ENSFCAG00000000083	MBD4	100	80.796	ENSPVAG00000005238	MBD4	100	80.796	Pteropus_vampyrus
ENSFCAG00000000083	MBD4	99	65.799	ENSRNOG00000010919	Mbd4	100	65.799	Rattus_norvegicus
ENSFCAG00000000083	MBD4	99	77.855	ENSRBIG00000027722	MBD4	99	77.855	Rhinopithecus_bieti
ENSFCAG00000000083	MBD4	99	77.682	ENSRROG00000029136	MBD4	99	77.682	Rhinopithecus_roxellana
ENSFCAG00000000083	MBD4	99	75.868	ENSSBOG00000016810	MBD4	100	75.868	Saimiri_boliviensis_boliviensis
ENSFCAG00000000083	MBD4	93	57.542	ENSSHAG00000012953	MBD4	94	57.542	Sarcophilus_harrisii
ENSFCAG00000000083	MBD4	80	61.803	ENSSARG00000004496	-	80	61.803	Sorex_araneus
ENSFCAG00000000083	MBD4	86	51.473	ENSSPUG00000017344	MBD4	91	51.473	Sphenodon_punctatus
ENSFCAG00000000083	MBD4	99	76.655	ENSSSCG00000033303	MBD4	100	76.655	Sus_scrofa
ENSFCAG00000000083	MBD4	87	62.385	ENSTBEG00000003041	-	87	62.385	Tupaia_belangeri
ENSFCAG00000000083	MBD4	94	79.707	ENSTTRG00000011265	MBD4	98	79.707	Tursiops_truncatus
ENSFCAG00000000083	MBD4	86	88.235	ENSUAMG00000000814	MBD4	100	88.235	Ursus_americanus
ENSFCAG00000000083	MBD4	99	85.512	ENSUMAG00000017542	MBD4	100	85.512	Ursus_maritimus
ENSFCAG00000000083	MBD4	64	68.037	ENSVPAG00000004040	-	68	68.037	Vicugna_pacos
ENSFCAG00000000083	MBD4	99	83.831	ENSVVUG00000014222	MBD4	99	83.831	Vulpes_vulpes