EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000000946 (Gene tree)
Gene ID: 101100630
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 29800 bases
Position: chrA2:146620446-146650245
Accession: 101100630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000000880	RRM_1	PF00076.22	5.5e-57	1	3
ENSFCAP00000000880	RRM_1	PF00076.22	5.5e-57	2	3
ENSFCAP00000000880	RRM_1	PF00076.22	5.5e-57	3	3
ENSFCAP00000048070	RRM_1	PF00076.22	4.6e-29	1	2
ENSFCAP00000048070	RRM_1	PF00076.22	4.6e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000051994	RBM28-202	1818	-	ENSFCAP00000048070	605 (aa)	-	UPI000DE7C164
ENSFCAT00000000946	RBM28-201	2794	XM_011280536	ENSFCAP00000000880	746 (aa)	XP_011278838	M3VVP8

Gene Model

Click here to download ENSFCAG00000000946's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000000946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000000946	RBM28	100	100.000	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSFCAG00000000946	RBM28	78	61.538	ENSAPOG00000015512	rbm28	100	50.253	Acanthochromis_polyacanthus
ENSFCAG00000000946	RBM28	100	97.500	ENSAMEG00000004776	RBM28	92	94.565	Ailuropoda_melanoleuca
ENSFCAG00000000946	RBM28	69	56.190	ENSACIG00000023153	rbm28	100	52.301	Amphilophus_citrinellus
ENSFCAG00000000946	RBM28	78	62.500	ENSAOCG00000000462	rbm28	100	51.558	Amphiprion_ocellaris
ENSFCAG00000000946	RBM28	78	62.500	ENSAPEG00000012996	rbm28	100	51.562	Amphiprion_percula
ENSFCAG00000000946	RBM28	80	65.000	ENSATEG00000001672	rbm28	100	50.193	Anabas_testudineus
ENSFCAG00000000946	RBM28	100	100.000	ENSANAG00000033922	RBM28	100	84.768	Aotus_nancymaae
ENSFCAG00000000946	RBM28	100	52.632	ENSACLG00000025024	rbm28	100	50.765	Astatotilapia_calliptera
ENSFCAG00000000946	RBM28	72	58.182	ENSAMXG00000000763	rbm28	99	60.091	Astyanax_mexicanus
ENSFCAG00000000946	RBM28	100	100.000	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSFCAG00000000946	RBM28	100	100.000	ENSCJAG00000017731	RBM28	100	82.546	Callithrix_jacchus
ENSFCAG00000000946	RBM28	100	95.000	ENSCAFG00000001667	RBM28	100	90.945	Canis_familiaris
ENSFCAG00000000946	RBM28	100	95.000	ENSCAFG00020021648	RBM28	100	90.945	Canis_lupus_dingo
ENSFCAG00000000946	RBM28	100	100.000	ENSCHIG00000014146	RBM28	100	84.462	Capra_hircus
ENSFCAG00000000946	RBM28	100	95.000	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSFCAG00000000946	RBM28	83	60.645	ENSCAPG00000013218	RBM28	98	60.328	Cavia_aperea
ENSFCAG00000000946	RBM28	100	95.000	ENSCPOG00000006253	RBM28	100	81.794	Cavia_porcellus
ENSFCAG00000000946	RBM28	100	100.000	ENSCCAG00000035105	RBM28	100	83.794	Cebus_capucinus
ENSFCAG00000000946	RBM28	100	97.500	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSFCAG00000000946	RBM28	100	95.000	ENSCLAG00000003707	RBM28	90	95.000	Chinchilla_lanigera
ENSFCAG00000000946	RBM28	100	100.000	ENSCSAG00000010161	RBM28	100	83.926	Chlorocebus_sabaeus
ENSFCAG00000000946	RBM28	66	81.908	ENSCHOG00000001994	-	63	90.323	Choloepus_hoffmanni
ENSFCAG00000000946	RBM28	66	60.000	ENSCPBG00000018088	RBM28	86	58.747	Chrysemys_picta_bellii
ENSFCAG00000000946	RBM28	95	40.267	ENSCING00000009238	-	84	41.018	Ciona_intestinalis
ENSFCAG00000000946	RBM28	55	43.195	ENSCSAVG00000007149	-	95	43.323	Ciona_savignyi
ENSFCAG00000000946	RBM28	88	100.000	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSFCAG00000000946	RBM28	89	100.000	ENSCGRG00001021278	Rbm28	69	100.000	Cricetulus_griseus_chok1gshd
ENSFCAG00000000946	RBM28	100	100.000	ENSCGRG00000005098	Rbm28	82	100.000	Cricetulus_griseus_crigri
ENSFCAG00000000946	RBM28	100	54.545	ENSCSEG00000004212	rbm28	100	50.392	Cynoglossus_semilaevis
ENSFCAG00000000946	RBM28	79	65.000	ENSCVAG00000010493	rbm28	99	50.514	Cyprinodon_variegatus
ENSFCAG00000000946	RBM28	88	55.556	ENSDARG00000025332	rbm28	100	50.472	Danio_rerio
ENSFCAG00000000946	RBM28	100	100.000	ENSDNOG00000001124	RBM28	100	84.697	Dasypus_novemcinctus
ENSFCAG00000000946	RBM28	82	80.361	ENSDORG00000004184	Rbm28	98	80.561	Dipodomys_ordii
ENSFCAG00000000946	RBM28	69	40.000	FBgn0260456	CG4806	93	35.513	Drosophila_melanogaster
ENSFCAG00000000946	RBM28	100	90.909	ENSETEG00000007130	RBM28	82	90.909	Echinops_telfairi
ENSFCAG00000000946	RBM28	99	40.805	ENSEBUG00000004419	rbm28	98	41.223	Eptatretus_burgeri
ENSFCAG00000000946	RBM28	100	97.500	ENSEASG00005008528	RBM28	100	86.441	Equus_asinus_asinus
ENSFCAG00000000946	RBM28	100	97.500	ENSECAG00000007745	RBM28	100	85.938	Equus_caballus
ENSFCAG00000000946	RBM28	100	95.000	ENSEEUG00000002389	RBM28	82	95.000	Erinaceus_europaeus
ENSFCAG00000000946	RBM28	100	62.500	ENSELUG00000020602	rbm28	100	52.704	Esox_lucius
ENSFCAG00000000946	RBM28	100	92.500	ENSFDAG00000010169	RBM28	100	83.512	Fukomys_damarensis
ENSFCAG00000000946	RBM28	83	52.392	ENSGMOG00000007091	rbm28	99	48.991	Gadus_morhua
ENSFCAG00000000946	RBM28	72	55.257	ENSGAFG00000004802	rbm28	97	55.088	Gambusia_affinis
ENSFCAG00000000946	RBM28	77	65.714	ENSGACG00000012612	rbm28	100	50.198	Gasterosteus_aculeatus
ENSFCAG00000000946	RBM28	77	79.121	ENSGAGG00000008873	RBM28	93	79.121	Gopherus_agassizii
ENSFCAG00000000946	RBM28	95	82.386	ENSGGOG00000004644	RBM28	97	82.802	Gorilla_gorilla
ENSFCAG00000000946	RBM28	90	52.068	ENSHBUG00000009611	rbm28	94	51.485	Haplochromis_burtoni
ENSFCAG00000000946	RBM28	100	95.000	ENSHGLG00000005409	RBM28	100	82.976	Heterocephalus_glaber_female
ENSFCAG00000000946	RBM28	100	95.000	ENSHGLG00100016458	RBM28	100	82.976	Heterocephalus_glaber_male
ENSFCAG00000000946	RBM28	79	67.500	ENSHCOG00000010597	rbm28	99	41.858	Hippocampus_comes
ENSFCAG00000000946	RBM28	70	50.000	ENSIPUG00000007103	rbm28	91	47.182	Ictalurus_punctatus
ENSFCAG00000000946	RBM28	100	93.182	ENSSTOG00000002169	RBM28	100	82.507	Ictidomys_tridecemlineatus
ENSFCAG00000000946	RBM28	96	97.500	ENSJJAG00000022400	Rbm28	100	74.704	Jaculus_jaculus
ENSFCAG00000000946	RBM28	80	65.000	ENSLBEG00000012998	rbm28	100	50.702	Labrus_bergylta
ENSFCAG00000000946	RBM28	67	76.667	ENSLACG00000010485	-	100	59.431	Latimeria_chalumnae
ENSFCAG00000000946	RBM28	89	70.000	ENSLOCG00000015541	rbm28	84	61.856	Lepisosteus_oculatus
ENSFCAG00000000946	RBM28	100	100.000	ENSLAFG00000010717	RBM28	100	83.069	Loxodonta_africana
ENSFCAG00000000946	RBM28	100	97.500	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSFCAG00000000946	RBM28	100	97.500	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSFCAG00000000946	RBM28	100	97.500	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSFCAG00000000946	RBM28	80	97.500	ENSMLEG00000037717	RBM28	100	82.340	Mandrillus_leucophaeus
ENSFCAG00000000946	RBM28	100	62.500	ENSMAMG00000008525	rbm28	100	52.375	Mastacembelus_armatus
ENSFCAG00000000946	RBM28	93	50.069	ENSMZEG00005019625	rbm28	100	49.932	Maylandia_zebra
ENSFCAG00000000946	RBM28	100	100.000	ENSMAUG00000002263	Rbm28	82	100.000	Mesocricetus_auratus
ENSFCAG00000000946	RBM28	93	79.501	ENSMICG00000000107	RBM28	100	79.778	Microcebus_murinus
ENSFCAG00000000946	RBM28	100	100.000	ENSMOCG00000014615	Rbm28	81	100.000	Microtus_ochrogaster
ENSFCAG00000000946	RBM28	72	54.253	ENSMMOG00000008600	rbm28	100	50.920	Mola_mola
ENSFCAG00000000946	RBM28	100	87.500	ENSMODG00000015151	RBM28	100	73.072	Monodelphis_domestica
ENSFCAG00000000946	RBM28	79	65.000	ENSMALG00000006419	rbm28	100	50.000	Monopterus_albus
ENSFCAG00000000946	RBM28	100	97.500	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.239	Mus_caroli
ENSFCAG00000000946	RBM28	100	97.500	ENSMUSG00000029701	Rbm28	100	80.718	Mus_musculus
ENSFCAG00000000946	RBM28	100	97.500	MGP_PahariEiJ_G0021920	Rbm28	100	80.397	Mus_pahari
ENSFCAG00000000946	RBM28	100	97.500	MGP_SPRETEiJ_G0029162	Rbm28	100	81.117	Mus_spretus
ENSFCAG00000000946	RBM28	100	100.000	ENSMPUG00000006511	RBM28	100	89.710	Mustela_putorius_furo
ENSFCAG00000000946	RBM28	100	100.000	ENSMLUG00000002186	RBM28	100	85.564	Myotis_lucifugus
ENSFCAG00000000946	RBM28	100	100.000	ENSNGAG00000006480	-	81	100.000	Nannospalax_galili
ENSFCAG00000000946	RBM28	100	92.500	ENSNGAG00000017946	-	100	78.313	Nannospalax_galili
ENSFCAG00000000946	RBM28	100	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSFCAG00000000946	RBM28	82	82.716	ENSMEUG00000009611	RBM28	89	82.716	Notamacropus_eugenii
ENSFCAG00000000946	RBM28	77	95.000	ENSOPRG00000015140	RBM28	90	73.410	Ochotona_princeps
ENSFCAG00000000946	RBM28	100	77.926	ENSODEG00000003213	-	100	78.191	Octodon_degus
ENSFCAG00000000946	RBM28	94	69.714	ENSODEG00000013217	-	99	68.857	Octodon_degus
ENSFCAG00000000946	RBM28	81	53.863	ENSONIG00000014924	rbm28	100	50.585	Oreochromis_niloticus
ENSFCAG00000000946	RBM28	100	85.000	ENSOANG00000000815	-	82	85.000	Ornithorhynchus_anatinus
ENSFCAG00000000946	RBM28	100	100.000	ENSOCUG00000003009	RBM28	82	100.000	Oryctolagus_cuniculus
ENSFCAG00000000946	RBM28	99	67.500	ENSORLG00000009636	rbm28	70	67.500	Oryzias_latipes
ENSFCAG00000000946	RBM28	80	67.500	ENSORLG00020002123	rbm28	99	51.031	Oryzias_latipes_hni
ENSFCAG00000000946	RBM28	78	72.222	ENSORLG00015015030	rbm28	98	59.709	Oryzias_latipes_hsok
ENSFCAG00000000946	RBM28	79	67.500	ENSOMEG00000007801	rbm28	100	52.296	Oryzias_melastigma
ENSFCAG00000000946	RBM28	94	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSFCAG00000000946	RBM28	100	100.000	ENSOARG00000002547	RBM28	100	84.441	Ovis_aries
ENSFCAG00000000946	RBM28	100	100.000	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSFCAG00000000946	RBM28	100	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSFCAG00000000946	RBM28	100	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSFCAG00000000946	RBM28	100	100.000	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSFCAG00000000946	RBM28	100	97.500	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSFCAG00000000946	RBM28	99	57.500	ENSPKIG00000023453	rbm28	99	50.558	Paramormyrops_kingsleyae
ENSFCAG00000000946	RBM28	100	55.000	ENSPMGG00000012840	rbm28	100	49.866	Periophthalmus_magnuspinnatus
ENSFCAG00000000946	RBM28	95	100.000	ENSPEMG00000020673	Rbm28	100	78.667	Peromyscus_maniculatus_bairdii
ENSFCAG00000000946	RBM28	59	45.383	ENSPMAG00000002948	-	99	46.505	Petromyzon_marinus
ENSFCAG00000000946	RBM28	100	87.500	ENSPCIG00000012810	RBM28	100	72.053	Phascolarctos_cinereus
ENSFCAG00000000946	RBM28	82	65.000	ENSPFOG00000018209	rbm28	100	49.936	Poecilia_formosa
ENSFCAG00000000946	RBM28	81	65.000	ENSPLAG00000016078	rbm28	96	49.805	Poecilia_latipinna
ENSFCAG00000000946	RBM28	82	65.000	ENSPMEG00000004292	rbm28	100	49.872	Poecilia_mexicana
ENSFCAG00000000946	RBM28	80	65.000	ENSPREG00000014287	rbm28	98	49.802	Poecilia_reticulata
ENSFCAG00000000946	RBM28	100	100.000	ENSPPYG00000017975	RBM28	100	84.190	Pongo_abelii
ENSFCAG00000000946	RBM28	65	97.500	ENSPCAG00000008223	RBM28	83	76.454	Procavia_capensis
ENSFCAG00000000946	RBM28	100	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSFCAG00000000946	RBM28	73	100.000	ENSPVAG00000005443	RBM28	77	92.157	Pteropus_vampyrus
ENSFCAG00000000946	RBM28	100	52.632	ENSPNYG00000014003	rbm28	100	50.512	Pundamilia_nyererei
ENSFCAG00000000946	RBM28	100	97.500	ENSRNOG00000005468	Rbm28	82	97.500	Rattus_norvegicus
ENSFCAG00000000946	RBM28	100	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSFCAG00000000946	RBM28	100	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSFCAG00000000946	RBM28	82	100.000	ENSSBOG00000012308	RBM28	100	78.796	Saimiri_boliviensis_boliviensis
ENSFCAG00000000946	RBM28	96	69.421	ENSSHAG00000017017	RBM28	99	69.337	Sarcophilus_harrisii
ENSFCAG00000000946	RBM28	79	62.500	ENSSFOG00015001231	rbm28	100	54.271	Scleropages_formosus
ENSFCAG00000000946	RBM28	72	53.968	ENSSMAG00000003885	rbm28	99	51.639	Scophthalmus_maximus
ENSFCAG00000000946	RBM28	79	57.500	ENSSLDG00000020099	rbm28	100	49.874	Seriola_lalandi_dorsalis
ENSFCAG00000000946	RBM28	73	97.500	ENSSARG00000008303	RBM28	81	87.218	Sorex_araneus
ENSFCAG00000000946	RBM28	67	73.529	ENSSPUG00000000838	RBM28	79	73.529	Sphenodon_punctatus
ENSFCAG00000000946	RBM28	72	52.993	ENSSPAG00000023305	rbm28	100	49.589	Stegastes_partitus
ENSFCAG00000000946	RBM28	100	100.000	ENSSSCG00000031847	RBM28	100	85.847	Sus_scrofa
ENSFCAG00000000946	RBM28	80	65.000	ENSTRUG00000013311	rbm28	99	48.604	Takifugu_rubripes
ENSFCAG00000000946	RBM28	99	65.000	ENSTNIG00000017962	rbm28	99	50.518	Tetraodon_nigroviridis
ENSFCAG00000000946	RBM28	86	86.686	ENSTBEG00000012749	RBM28	86	86.686	Tupaia_belangeri
ENSFCAG00000000946	RBM28	100	100.000	ENSTTRG00000013647	RBM28	100	83.289	Tursiops_truncatus
ENSFCAG00000000946	RBM28	100	100.000	ENSUAMG00000006949	RBM28	85	100.000	Ursus_americanus
ENSFCAG00000000946	RBM28	100	100.000	ENSUMAG00000005997	RBM28	100	90.608	Ursus_maritimus
ENSFCAG00000000946	RBM28	94	76.399	ENSVPAG00000008304	RBM28	87	79.300	Vicugna_pacos
ENSFCAG00000000946	RBM28	100	95.000	ENSVVUG00000007270	RBM28	100	90.679	Vulpes_vulpes
ENSFCAG00000000946	RBM28	99	67.500	ENSXETG00000009271	rbm28	99	56.066	Xenopus_tropicalis
ENSFCAG00000000946	RBM28	72	54.214	ENSXCOG00000020357	rbm28	99	53.125	Xiphophorus_couchianus
ENSFCAG00000000946	RBM28	81	67.500	ENSXMAG00000004415	rbm28	100	50.859	Xiphophorus_maculatus