EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000001619 (Gene tree)
Gene ID: 101094066
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 11091 bases
Position: chrE2:23028735-23039825
Accession: 101094066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000001502	UPF0086	PF01868.16	4.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000001619	POP4-201	2904	XM_003997960	ENSFCAP00000001502	220 (aa)	XP_003998009	M3VWZ3

Gene Model

Click here to download ENSFCAG00000001619's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03008	Ribosome biogenesis in eukaryotes	KEGG
fca03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000001619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000001619	POP4	100	89.091	ENSG00000105171	POP4	100	93.750	Homo_sapiens
ENSFCAG00000001619	POP4	99	92.661	ENSAMEG00000018329	-	99	92.661	Ailuropoda_melanoleuca
ENSFCAG00000001619	POP4	97	80.465	ENSAMEG00000003172	-	97	80.465	Ailuropoda_melanoleuca
ENSFCAG00000001619	POP4	89	62.564	ENSACIG00000008358	pop4	93	62.564	Amphilophus_citrinellus
ENSFCAG00000001619	POP4	91	62.745	ENSAOCG00000010116	pop4	99	62.255	Amphiprion_ocellaris
ENSFCAG00000001619	POP4	90	62.376	ENSAPEG00000002829	pop4	85	61.881	Amphiprion_percula
ENSFCAG00000001619	POP4	94	60.849	ENSATEG00000013028	pop4	94	60.664	Anabas_testudineus
ENSFCAG00000001619	POP4	90	73.604	ENSAPLG00000014051	POP4	95	73.604	Anas_platyrhynchos
ENSFCAG00000001619	POP4	100	86.818	ENSANAG00000020295	POP4	100	86.818	Aotus_nancymaae
ENSFCAG00000001619	POP4	89	62.051	ENSACLG00000000526	pop4	88	62.051	Astatotilapia_calliptera
ENSFCAG00000001619	POP4	100	59.545	ENSAMXG00000002899	pop4	100	59.545	Astyanax_mexicanus
ENSFCAG00000001619	POP4	100	90.909	ENSBTAG00000002223	POP4	100	90.909	Bos_taurus
ENSFCAG00000001619	POP4	100	86.878	ENSCJAG00000046750	POP4	100	86.667	Callithrix_jacchus
ENSFCAG00000001619	POP4	83	92.308	ENSCAFG00000007630	POP4	100	92.308	Canis_familiaris
ENSFCAG00000001619	POP4	100	91.818	ENSCHIG00000016743	POP4	100	91.818	Capra_hircus
ENSFCAG00000001619	POP4	100	90.000	ENSTSYG00000003488	POP4	100	90.000	Carlito_syrichta
ENSFCAG00000001619	POP4	99	66.820	ENSCAPG00000011105	POP4	100	66.820	Cavia_aperea
ENSFCAG00000001619	POP4	100	86.364	ENSCPOG00000002992	POP4	100	86.364	Cavia_porcellus
ENSFCAG00000001619	POP4	100	74.091	ENSCCAG00000034244	-	100	74.091	Cebus_capucinus
ENSFCAG00000001619	POP4	100	88.182	ENSCCAG00000020285	-	100	88.182	Cebus_capucinus
ENSFCAG00000001619	POP4	100	90.455	ENSCATG00000036022	POP4	100	95.833	Cercocebus_atys
ENSFCAG00000001619	POP4	100	86.818	ENSCLAG00000013162	POP4	100	86.818	Chinchilla_lanigera
ENSFCAG00000001619	POP4	99	89.450	ENSCSAG00000004868	POP4	100	89.450	Chlorocebus_sabaeus
ENSFCAG00000001619	POP4	98	69.444	ENSCHOG00000002071	POP4	100	69.124	Choloepus_hoffmanni
ENSFCAG00000001619	POP4	100	72.727	ENSCPBG00000016132	POP4	100	72.727	Chrysemys_picta_bellii
ENSFCAG00000001619	POP4	84	33.508	ENSCING00000023871	-	94	33.508	Ciona_intestinalis
ENSFCAG00000001619	POP4	90	90.955	ENSCANG00000005924	POP4	99	90.955	Colobus_angolensis_palliatus
ENSFCAG00000001619	POP4	100	84.091	ENSCGRG00001017185	Pop4	100	83.636	Cricetulus_griseus_chok1gshd
ENSFCAG00000001619	POP4	100	84.091	ENSCGRG00000008155	Pop4	100	83.636	Cricetulus_griseus_crigri
ENSFCAG00000001619	POP4	94	54.327	ENSCSEG00000002946	pop4	94	54.327	Cynoglossus_semilaevis
ENSFCAG00000001619	POP4	93	42.718	ENSCVAG00000018602	POP4	85	42.347	Cyprinodon_variegatus
ENSFCAG00000001619	POP4	100	61.818	ENSDARG00000101472	pop4	100	61.818	Danio_rerio
ENSFCAG00000001619	POP4	100	87.727	ENSDNOG00000047663	POP4	88	87.727	Dasypus_novemcinctus
ENSFCAG00000001619	POP4	78	83.721	ENSDORG00000008577	Pop4	100	83.721	Dipodomys_ordii
ENSFCAG00000001619	POP4	67	38.710	FBgn0035831	CG8038	70	38.621	Drosophila_melanogaster
ENSFCAG00000001619	POP4	99	73.272	ENSETEG00000003607	POP4	100	73.272	Echinops_telfairi
ENSFCAG00000001619	POP4	91	46.262	ENSEBUG00000010447	pop4	83	45.794	Eptatretus_burgeri
ENSFCAG00000001619	POP4	100	42.081	ENSEBUG00000008575	pop4	100	42.081	Eptatretus_burgeri
ENSFCAG00000001619	POP4	100	39.485	ENSEBUG00000004305	pop4	100	39.056	Eptatretus_burgeri
ENSFCAG00000001619	POP4	100	90.385	ENSECAG00000020206	POP4	82	90.385	Equus_caballus
ENSFCAG00000001619	POP4	90	69.036	ENSEEUG00000013109	POP4	99	69.036	Erinaceus_europaeus
ENSFCAG00000001619	POP4	89	65.306	ENSELUG00000019812	pop4	89	63.776	Esox_lucius
ENSFCAG00000001619	POP4	98	68.519	ENSFALG00000000206	POP4	96	68.519	Ficedula_albicollis
ENSFCAG00000001619	POP4	100	88.636	ENSFDAG00000017859	POP4	100	88.636	Fukomys_damarensis
ENSFCAG00000001619	POP4	90	58.000	ENSFHEG00000012745	pop4	90	57.500	Fundulus_heteroclitus
ENSFCAG00000001619	POP4	90	60.500	ENSGMOG00000000335	pop4	99	60.000	Gadus_morhua
ENSFCAG00000001619	POP4	100	68.182	ENSGALG00000041972	POP4	92	68.182	Gallus_gallus
ENSFCAG00000001619	POP4	78	50.575	ENSGAFG00000003571	pop4	96	50.575	Gambusia_affinis
ENSFCAG00000001619	POP4	99	57.848	ENSGACG00000014510	pop4	100	63.043	Gasterosteus_aculeatus
ENSFCAG00000001619	POP4	100	73.636	ENSGAGG00000024544	POP4	79	73.636	Gopherus_agassizii
ENSFCAG00000001619	POP4	99	88.532	ENSGGOG00000038346	POP4	99	88.940	Gorilla_gorilla
ENSFCAG00000001619	POP4	89	62.051	ENSHBUG00000021821	pop4	88	62.051	Haplochromis_burtoni
ENSFCAG00000001619	POP4	99	88.073	ENSHGLG00000015798	POP4	99	88.073	Heterocephalus_glaber_female
ENSFCAG00000001619	POP4	100	87.727	ENSHGLG00100009737	POP4	100	87.727	Heterocephalus_glaber_male
ENSFCAG00000001619	POP4	89	62.564	ENSHCOG00000020937	pop4	88	62.564	Hippocampus_comes
ENSFCAG00000001619	POP4	100	59.545	ENSIPUG00000013652	pop4	100	59.545	Ictalurus_punctatus
ENSFCAG00000001619	POP4	100	90.000	ENSSTOG00000011016	POP4	100	90.000	Ictidomys_tridecemlineatus
ENSFCAG00000001619	POP4	100	88.636	ENSJJAG00000013376	Pop4	100	88.636	Jaculus_jaculus
ENSFCAG00000001619	POP4	98	60.092	ENSKMAG00000012250	pop4	98	59.633	Kryptolebias_marmoratus
ENSFCAG00000001619	POP4	99	55.856	ENSLBEG00000018846	-	99	55.455	Labrus_bergylta
ENSFCAG00000001619	POP4	99	55.856	ENSLBEG00000014139	pop4	99	55.455	Labrus_bergylta
ENSFCAG00000001619	POP4	100	63.636	ENSLACG00000008581	POP4	98	64.516	Latimeria_chalumnae
ENSFCAG00000001619	POP4	100	68.182	ENSLOCG00000005597	pop4	100	68.182	Lepisosteus_oculatus
ENSFCAG00000001619	POP4	100	88.182	ENSLAFG00000000084	POP4	100	88.182	Loxodonta_africana
ENSFCAG00000001619	POP4	100	90.000	ENSMFAG00000029606	POP4	100	90.000	Macaca_fascicularis
ENSFCAG00000001619	POP4	100	88.688	ENSMMUG00000017424	POP4	100	86.878	Macaca_mulatta
ENSFCAG00000001619	POP4	100	88.688	ENSMNEG00000031374	POP4	100	86.878	Macaca_nemestrina
ENSFCAG00000001619	POP4	100	90.000	ENSMLEG00000043454	POP4	100	90.000	Mandrillus_leucophaeus
ENSFCAG00000001619	POP4	85	64.362	ENSMAMG00000011716	pop4	92	59.722	Mastacembelus_armatus
ENSFCAG00000001619	POP4	89	62.051	ENSMZEG00005002360	pop4	88	62.051	Maylandia_zebra
ENSFCAG00000001619	POP4	99	68.807	ENSMGAG00000005337	POP4	97	68.807	Meleagris_gallopavo
ENSFCAG00000001619	POP4	100	85.455	ENSMAUG00000020110	Pop4	100	85.455	Mesocricetus_auratus
ENSFCAG00000001619	POP4	99	85.321	ENSMICG00000035730	POP4	98	85.321	Microcebus_murinus
ENSFCAG00000001619	POP4	94	61.353	ENSMMOG00000015321	pop4	93	61.650	Mola_mola
ENSFCAG00000001619	POP4	98	80.093	ENSMODG00000029406	POP4	94	80.093	Monodelphis_domestica
ENSFCAG00000001619	POP4	95	62.857	ENSMALG00000012571	pop4	95	62.857	Monopterus_albus
ENSFCAG00000001619	POP4	100	82.353	MGP_CAROLIEiJ_G0029600	Pop4	100	81.900	Mus_caroli
ENSFCAG00000001619	POP4	100	82.805	ENSMUSG00000030423	Pop4	100	81.900	Mus_musculus
ENSFCAG00000001619	POP4	100	82.727	MGP_SPRETEiJ_G0030699	Pop4	100	81.818	Mus_spretus
ENSFCAG00000001619	POP4	100	79.186	ENSMPUG00000008063	-	100	79.186	Mustela_putorius_furo
ENSFCAG00000001619	POP4	100	93.182	ENSMPUG00000008041	-	100	93.182	Mustela_putorius_furo
ENSFCAG00000001619	POP4	99	69.406	ENSMLUG00000010774	POP4	99	69.406	Myotis_lucifugus
ENSFCAG00000001619	POP4	57	80.800	ENSMEUG00000003636	-	100	80.800	Notamacropus_eugenii
ENSFCAG00000001619	POP4	90	89.899	ENSOPRG00000004736	POP4	99	89.899	Ochotona_princeps
ENSFCAG00000001619	POP4	99	87.097	ENSODEG00000013025	POP4	100	87.264	Octodon_degus
ENSFCAG00000001619	POP4	89	61.538	ENSONIG00000003458	pop4	87	61.538	Oreochromis_niloticus
ENSFCAG00000001619	POP4	100	88.636	ENSOCUG00000015974	POP4	100	88.636	Oryctolagus_cuniculus
ENSFCAG00000001619	POP4	90	58.794	ENSORLG00000020317	pop4	90	58.291	Oryzias_latipes
ENSFCAG00000001619	POP4	94	57.212	ENSORLG00015011624	pop4	93	56.731	Oryzias_latipes_hsok
ENSFCAG00000001619	POP4	90	60.804	ENSOMEG00000002538	pop4	89	60.302	Oryzias_melastigma
ENSFCAG00000001619	POP4	99	87.156	ENSOGAG00000011168	POP4	99	87.156	Otolemur_garnettii
ENSFCAG00000001619	POP4	100	91.403	ENSOARG00000004041	POP4	100	91.403	Ovis_aries
ENSFCAG00000001619	POP4	100	89.091	ENSPPAG00000040372	POP4	100	89.091	Pan_paniscus
ENSFCAG00000001619	POP4	100	100.000	ENSPPRG00000010502	POP4	100	100.000	Panthera_pardus
ENSFCAG00000001619	POP4	100	99.545	ENSPTIG00000016598	POP4	100	99.545	Panthera_tigris_altaica
ENSFCAG00000001619	POP4	100	89.091	ENSPTRG00000010779	POP4	100	89.091	Pan_troglodytes
ENSFCAG00000001619	POP4	100	90.000	ENSPANG00000008546	POP4	100	90.000	Papio_anubis
ENSFCAG00000001619	POP4	89	69.697	ENSPKIG00000004468	pop4	87	69.192	Paramormyrops_kingsleyae
ENSFCAG00000001619	POP4	100	73.182	ENSPSIG00000015690	POP4	98	77.778	Pelodiscus_sinensis
ENSFCAG00000001619	POP4	90	58.621	ENSPMGG00000008608	pop4	97	58.128	Periophthalmus_magnuspinnatus
ENSFCAG00000001619	POP4	99	69.725	ENSPEMG00000019982	-	100	69.725	Peromyscus_maniculatus_bairdii
ENSFCAG00000001619	POP4	100	83.182	ENSPEMG00000014034	-	96	83.182	Peromyscus_maniculatus_bairdii
ENSFCAG00000001619	POP4	66	67.586	ENSPMAG00000006265	pop4	94	56.452	Petromyzon_marinus
ENSFCAG00000001619	POP4	100	79.091	ENSPCIG00000024738	POP4	95	79.091	Phascolarctos_cinereus
ENSFCAG00000001619	POP4	98	55.300	ENSPFOG00000000925	pop4	98	55.300	Poecilia_formosa
ENSFCAG00000001619	POP4	98	55.300	ENSPLAG00000003161	pop4	88	60.204	Poecilia_latipinna
ENSFCAG00000001619	POP4	98	55.300	ENSPMEG00000002475	pop4	98	55.300	Poecilia_mexicana
ENSFCAG00000001619	POP4	90	58.794	ENSPREG00000022403	pop4	86	58.794	Poecilia_reticulata
ENSFCAG00000001619	POP4	100	89.545	ENSPPYG00000009805	POP4	100	89.545	Pongo_abelii
ENSFCAG00000001619	POP4	99	78.995	ENSPCAG00000007737	POP4	99	78.995	Procavia_capensis
ENSFCAG00000001619	POP4	100	89.545	ENSPCOG00000018055	POP4	100	89.545	Propithecus_coquereli
ENSFCAG00000001619	POP4	100	87.727	ENSPVAG00000006069	POP4	100	87.727	Pteropus_vampyrus
ENSFCAG00000001619	POP4	89	62.564	ENSPNYG00000020038	pop4	88	62.564	Pundamilia_nyererei
ENSFCAG00000001619	POP4	100	61.364	ENSPNAG00000005591	pop4	100	61.364	Pygocentrus_nattereri
ENSFCAG00000001619	POP4	100	84.163	ENSRNOG00000027646	Pop4	100	83.710	Rattus_norvegicus
ENSFCAG00000001619	POP4	80	85.143	ENSRBIG00000044769	POP4	89	87.681	Rhinopithecus_bieti
ENSFCAG00000001619	POP4	100	89.545	ENSRROG00000028903	POP4	100	89.545	Rhinopithecus_roxellana
ENSFCAG00000001619	POP4	100	87.727	ENSSBOG00000032445	POP4	100	87.727	Saimiri_boliviensis_boliviensis
ENSFCAG00000001619	POP4	99	77.982	ENSSHAG00000016888	POP4	99	77.982	Sarcophilus_harrisii
ENSFCAG00000001619	POP4	89	68.367	ENSSFOG00015014556	pop4	87	67.857	Scleropages_formosus
ENSFCAG00000001619	POP4	93	62.559	ENSSMAG00000016611	pop4	99	62.085	Scophthalmus_maximus
ENSFCAG00000001619	POP4	94	61.244	ENSSDUG00000019865	pop4	84	60.766	Seriola_dumerili
ENSFCAG00000001619	POP4	94	60.766	ENSSLDG00000001763	pop4	93	60.577	Seriola_lalandi_dorsalis
ENSFCAG00000001619	POP4	99	87.097	ENSSARG00000004748	POP4	100	87.097	Sorex_araneus
ENSFCAG00000001619	POP4	94	62.019	ENSSPAG00000014364	pop4	93	61.538	Stegastes_partitus
ENSFCAG00000001619	POP4	100	91.818	ENSSSCG00000002854	POP4	100	91.818	Sus_scrofa
ENSFCAG00000001619	POP4	90	73.232	ENSTGUG00000008953	POP4	99	73.232	Taeniopygia_guttata
ENSFCAG00000001619	POP4	89	63.776	ENSTNIG00000006401	pop4	97	63.776	Tetraodon_nigroviridis
ENSFCAG00000001619	POP4	100	89.140	ENSTBEG00000002194	POP4	100	89.140	Tupaia_belangeri
ENSFCAG00000001619	POP4	100	88.636	ENSTTRG00000005882	POP4	100	88.636	Tursiops_truncatus
ENSFCAG00000001619	POP4	100	93.636	ENSUAMG00000003049	-	100	93.636	Ursus_americanus
ENSFCAG00000001619	POP4	100	93.636	ENSUMAG00000007522	-	100	93.636	Ursus_maritimus
ENSFCAG00000001619	POP4	92	91.089	ENSVVUG00000016876	-	71	91.089	Vulpes_vulpes
ENSFCAG00000001619	POP4	98	65.741	ENSXETG00000017598	pop4	98	65.741	Xenopus_tropicalis
ENSFCAG00000001619	POP4	90	58.706	ENSXCOG00000017695	pop4	86	58.209	Xiphophorus_couchianus
ENSFCAG00000001619	POP4	90	58.706	ENSXMAG00000013862	pop4	86	58.209	Xiphophorus_maculatus