EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000002156 (Gene tree)
Gene ID: 101091585
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 26661 bases
Position: chrF1:7135621-7162281
Accession: 101091585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000051380	SAP	PF02037.27	3.1e-10	1	1
ENSFCAP00000001993	SAP	PF02037.27	3.5e-10	1	1
ENSFCAP00000043080	SAP	PF02037.27	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000065005	HNRNPU-204	1638	-	ENSFCAP00000050605	545 (aa)	-	UPI000DE7E4D9
ENSFCAT00000063428	HNRNPU-201	7407	XM_023247628	ENSFCAP00000043080	814 (aa)	XP_023103396	UPI000DE7EC50
ENSFCAT00000002156	HNRNPU-202	2442	-	ENSFCAP00000001993	813 (aa)	-	M3VY03
ENSFCAT00000055795	HNRNPU-203	2232	-	ENSFCAP00000051380	743 (aa)	-	UPI000DE7E457

Gene Model

Click here to download ENSFCAG00000002156's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000002156's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000002156	HNRNPU	71	59.075	ENSFCAG00000005433	HNRNPUL1	59	67.347
ENSFCAG00000002156	HNRNPU	74	44.783	ENSFCAG00000014766	-	67	50.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000002156	HNRNPU	100	98.387	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSFCAG00000002156	HNRNPU	74	57.121	ENSAPOG00000017400	hnrnpub	81	59.133	Acanthochromis_polyacanthus
ENSFCAG00000002156	HNRNPU	99	99.250	ENSAMEG00000009145	HNRNPU	100	96.468	Ailuropoda_melanoleuca
ENSFCAG00000002156	HNRNPU	99	51.995	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSFCAG00000002156	HNRNPU	99	49.691	ENSAOCG00000015843	hnrnpub	81	59.288	Amphiprion_ocellaris
ENSFCAG00000002156	HNRNPU	99	49.691	ENSAPEG00000014679	hnrnpub	81	59.288	Amphiprion_percula
ENSFCAG00000002156	HNRNPU	68	61.307	ENSATEG00000016178	hnrnpub	78	57.903	Anabas_testudineus
ENSFCAG00000002156	HNRNPU	80	88.889	ENSACAG00000004511	HNRNPU	72	89.369	Anolis_carolinensis
ENSFCAG00000002156	HNRNPU	100	98.522	ENSANAG00000033895	-	100	98.635	Aotus_nancymaae
ENSFCAG00000002156	HNRNPU	77	83.333	ENSACLG00000008165	hnrnpub	74	83.333	Astatotilapia_calliptera
ENSFCAG00000002156	HNRNPU	99	99.248	ENSBTAG00000007606	HNRNPU	99	98.879	Bos_taurus
ENSFCAG00000002156	HNRNPU	100	98.253	ENSCJAG00000016914	HNRNPU	100	98.253	Callithrix_jacchus
ENSFCAG00000002156	HNRNPU	99	99.380	ENSCAFG00020000918	HNRNPU	100	99.380	Canis_lupus_dingo
ENSFCAG00000002156	HNRNPU	99	98.883	ENSCHIG00000004900	HNRNPU	100	98.883	Capra_hircus
ENSFCAG00000002156	HNRNPU	99	95.874	ENSCPOG00000011887	HNRNPU	100	95.874	Cavia_porcellus
ENSFCAG00000002156	HNRNPU	100	98.253	ENSCCAG00000037859	-	100	98.253	Cebus_capucinus
ENSFCAG00000002156	HNRNPU	100	98.253	ENSCATG00000035273	HNRNPU	100	98.253	Cercocebus_atys
ENSFCAG00000002156	HNRNPU	99	96.117	ENSCLAG00000007100	HNRNPU	100	96.117	Chinchilla_lanigera
ENSFCAG00000002156	HNRNPU	99	98.387	ENSCSAG00000009219	HNRNPU	100	98.387	Chlorocebus_sabaeus
ENSFCAG00000002156	HNRNPU	80	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSFCAG00000002156	HNRNPU	97	87.523	ENSCPBG00000009415	HNRNPU	88	91.129	Chrysemys_picta_bellii
ENSFCAG00000002156	HNRNPU	98	98.684	ENSCANG00000022780	HNRNPU	100	95.343	Colobus_angolensis_palliatus
ENSFCAG00000002156	HNRNPU	99	98.496	ENSCGRG00001020525	Hnrnpu	100	96.025	Cricetulus_griseus_chok1gshd
ENSFCAG00000002156	HNRNPU	69	64.062	ENSCSEG00000010804	hnrnpub	89	62.615	Cynoglossus_semilaevis
ENSFCAG00000002156	HNRNPU	80	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSFCAG00000002156	HNRNPU	79	85.714	ENSDARG00000004735	hnrnpub	90	59.459	Danio_rerio
ENSFCAG00000002156	HNRNPU	79	62.319	ENSDARG00000015206	hnrnpua	89	62.319	Danio_rerio
ENSFCAG00000002156	HNRNPU	79	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSFCAG00000002156	HNRNPU	99	92.050	ENSDORG00000015491	Hnrnpu	100	91.925	Dipodomys_ordii
ENSFCAG00000002156	HNRNPU	96	98.684	ENSETEG00000014565	HNRNPU	100	93.300	Echinops_telfairi
ENSFCAG00000002156	HNRNPU	99	99.436	ENSEASG00005003017	HNRNPU	100	98.511	Equus_asinus_asinus
ENSFCAG00000002156	HNRNPU	99	99.248	ENSECAG00000007955	HNRNPU	100	98.263	Equus_caballus
ENSFCAG00000002156	HNRNPU	69	62.609	ENSELUG00000010733	hnrnpub	68	61.937	Esox_lucius
ENSFCAG00000002156	HNRNPU	99	50.491	ENSELUG00000011966	hnrnpua	58	72.727	Esox_lucius
ENSFCAG00000002156	HNRNPU	90	98.872	ENSFDAG00000006026	HNRNPU	100	98.990	Fukomys_damarensis
ENSFCAG00000002156	HNRNPU	74	53.566	ENSFHEG00000022639	hnrnpub	62	59.779	Fundulus_heteroclitus
ENSFCAG00000002156	HNRNPU	73	58.466	ENSGMOG00000001755	hnrnpub	77	59.314	Gadus_morhua
ENSFCAG00000002156	HNRNPU	97	87.175	ENSGALG00000010671	HNRNPU	99	78.125	Gallus_gallus
ENSFCAG00000002156	HNRNPU	74	54.038	ENSGAFG00000009369	hnrnpub	79	55.708	Gambusia_affinis
ENSFCAG00000002156	HNRNPU	78	74.000	ENSGACG00000004679	hnrnpub	72	77.083	Gasterosteus_aculeatus
ENSFCAG00000002156	HNRNPU	100	97.849	ENSGGOG00000004061	HNRNPU	100	97.849	Gorilla_gorilla
ENSFCAG00000002156	HNRNPU	74	57.380	ENSHBUG00000012290	hnrnpub	80	57.680	Haplochromis_burtoni
ENSFCAG00000002156	HNRNPU	99	98.261	ENSHGLG00000010594	-	100	98.261	Heterocephalus_glaber_female
ENSFCAG00000002156	HNRNPU	81	99.328	ENSHGLG00100015093	HNRNPU	100	99.328	Heterocephalus_glaber_male
ENSFCAG00000002156	HNRNPU	74	52.863	ENSHCOG00000020091	hnrnpub	76	54.631	Hippocampus_comes
ENSFCAG00000002156	HNRNPU	72	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSFCAG00000002156	HNRNPU	99	98.308	ENSJJAG00000011371	Hnrnpu	100	94.189	Jaculus_jaculus
ENSFCAG00000002156	HNRNPU	74	55.147	ENSKMAG00000004532	hnrnpub	80	55.105	Kryptolebias_marmoratus
ENSFCAG00000002156	HNRNPU	74	56.018	ENSLBEG00000022520	hnrnpub	80	57.470	Labrus_bergylta
ENSFCAG00000002156	HNRNPU	99	62.639	ENSLACG00000017463	HNRNPU	99	62.531	Latimeria_chalumnae
ENSFCAG00000002156	HNRNPU	78	80.435	ENSLOCG00000016652	hnrnpua	76	67.341	Lepisosteus_oculatus
ENSFCAG00000002156	HNRNPU	99	96.894	ENSLAFG00000021377	HNRNPU	100	96.894	Loxodonta_africana
ENSFCAG00000002156	HNRNPU	100	98.253	ENSMFAG00000037308	HNRNPU	100	98.253	Macaca_fascicularis
ENSFCAG00000002156	HNRNPU	99	98.387	ENSMMUG00000021098	HNRNPU	100	98.387	Macaca_mulatta
ENSFCAG00000002156	HNRNPU	100	98.253	ENSMNEG00000043645	HNRNPU	100	98.253	Macaca_nemestrina
ENSFCAG00000002156	HNRNPU	74	57.612	ENSMAMG00000007196	hnrnpub	80	58.050	Mastacembelus_armatus
ENSFCAG00000002156	HNRNPU	77	83.333	ENSMZEG00005003185	hnrnpub	74	83.333	Maylandia_zebra
ENSFCAG00000002156	HNRNPU	99	98.496	ENSMAUG00000008842	Hnrnpu	100	96.025	Mesocricetus_auratus
ENSFCAG00000002156	HNRNPU	100	98.387	ENSMICG00000004616	HNRNPU	100	98.387	Microcebus_murinus
ENSFCAG00000002156	HNRNPU	99	98.308	ENSMOCG00000015623	Hnrnpu	100	95.901	Microtus_ochrogaster
ENSFCAG00000002156	HNRNPU	99	94.495	ENSMODG00000006515	HNRNPU	100	89.647	Monodelphis_domestica
ENSFCAG00000002156	HNRNPU	78	70.588	ENSMALG00000018243	hnrnpub	70	62.787	Monopterus_albus
ENSFCAG00000002156	HNRNPU	99	96.278	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.278	Mus_caroli
ENSFCAG00000002156	HNRNPU	99	96.402	ENSMUSG00000039630	Hnrnpu	100	96.402	Mus_musculus
ENSFCAG00000002156	HNRNPU	99	94.548	MGP_PahariEiJ_G0028193	Hnrnpu	100	94.672	Mus_pahari
ENSFCAG00000002156	HNRNPU	99	96.402	MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.402	Mus_spretus
ENSFCAG00000002156	HNRNPU	99	90.706	ENSMLUG00000000475	HNRNPU	100	89.851	Myotis_lucifugus
ENSFCAG00000002156	HNRNPU	99	98.684	ENSNGAG00000019075	Hnrnpu	100	96.894	Nannospalax_galili
ENSFCAG00000002156	HNRNPU	74	57.035	ENSNBRG00000017855	hnrnpub	80	55.623	Neolamprologus_brichardi
ENSFCAG00000002156	HNRNPU	97	90.421	ENSMEUG00000000541	HNRNPU	100	87.198	Notamacropus_eugenii
ENSFCAG00000002156	HNRNPU	69	97.436	ENSODEG00000014458	-	100	97.436	Octodon_degus
ENSFCAG00000002156	HNRNPU	79	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSFCAG00000002156	HNRNPU	97	98.835	ENSOCUG00000014469	HNRNPU	94	95.711	Oryctolagus_cuniculus
ENSFCAG00000002156	HNRNPU	74	57.612	ENSORLG00000016114	hnrnpub	80	54.723	Oryzias_latipes
ENSFCAG00000002156	HNRNPU	74	57.463	ENSORLG00020005363	hnrnpub	80	54.655	Oryzias_latipes_hni
ENSFCAG00000002156	HNRNPU	74	57.313	ENSORLG00015001190	hnrnpub	80	54.505	Oryzias_latipes_hsok
ENSFCAG00000002156	HNRNPU	74	55.036	ENSOMEG00000014951	hnrnpub	81	54.737	Oryzias_melastigma
ENSFCAG00000002156	HNRNPU	99	98.387	ENSOGAG00000014024	HNRNPU	100	98.387	Otolemur_garnettii
ENSFCAG00000002156	HNRNPU	81	100.000	ENSOARG00000004985	HNRNPU	91	98.993	Ovis_aries
ENSFCAG00000002156	HNRNPU	100	98.387	ENSPPAG00000038652	HNRNPU	100	98.387	Pan_paniscus
ENSFCAG00000002156	HNRNPU	100	99.866	ENSPPRG00000002662	HNRNPU	100	99.866	Panthera_pardus
ENSFCAG00000002156	HNRNPU	100	98.387	ENSPTRG00000002182	HNRNPU	100	98.387	Pan_troglodytes
ENSFCAG00000002156	HNRNPU	100	98.253	ENSPANG00000011643	HNRNPU	100	98.387	Papio_anubis
ENSFCAG00000002156	HNRNPU	74	66.193	ENSPKIG00000022332	hnrnpub	78	66.879	Paramormyrops_kingsleyae
ENSFCAG00000002156	HNRNPU	74	65.403	ENSPKIG00000006885	hnrnpua	78	66.560	Paramormyrops_kingsleyae
ENSFCAG00000002156	HNRNPU	100	93.659	ENSPCIG00000008657	HNRNPU	100	93.395	Phascolarctos_cinereus
ENSFCAG00000002156	HNRNPU	74	54.038	ENSPFOG00000002908	hnrnpub	80	55.708	Poecilia_formosa
ENSFCAG00000002156	HNRNPU	74	54.692	ENSPLAG00000004160	hnrnpub	80	55.878	Poecilia_latipinna
ENSFCAG00000002156	HNRNPU	99	94.169	ENSPCOG00000003883	-	100	94.169	Propithecus_coquereli
ENSFCAG00000002156	HNRNPU	100	98.522	ENSPCOG00000018655	-	100	98.522	Propithecus_coquereli
ENSFCAG00000002156	HNRNPU	99	99.060	ENSPVAG00000002581	HNRNPU	100	96.606	Pteropus_vampyrus
ENSFCAG00000002156	HNRNPU	74	57.640	ENSPNYG00000021642	hnrnpub	80	56.079	Pundamilia_nyererei
ENSFCAG00000002156	HNRNPU	99	56.140	ENSPNAG00000001055	hnrnpub	79	64.038	Pygocentrus_nattereri
ENSFCAG00000002156	HNRNPU	99	96.025	ENSRNOG00000033790	Hnrnpu	100	96.025	Rattus_norvegicus
ENSFCAG00000002156	HNRNPU	99	97.019	ENSRBIG00000031519	HNRNPU	100	97.019	Rhinopithecus_bieti
ENSFCAG00000002156	HNRNPU	99	98.511	ENSRROG00000041642	HNRNPU	100	98.511	Rhinopithecus_roxellana
ENSFCAG00000002156	HNRNPU	93	59.690	ENSSFOG00015019004	hnrnpu	72	80.851	Scleropages_formosus
ENSFCAG00000002156	HNRNPU	99	55.730	ENSSFOG00015001124	hnrnpub	78	65.635	Scleropages_formosus
ENSFCAG00000002156	HNRNPU	68	61.484	ENSSMAG00000003607	hnrnpub	77	58.129	Scophthalmus_maximus
ENSFCAG00000002156	HNRNPU	74	56.951	ENSSDUG00000005912	hnrnpub	77	58.517	Seriola_dumerili
ENSFCAG00000002156	HNRNPU	74	56.801	ENSSLDG00000004899	hnrnpub	77	58.360	Seriola_lalandi_dorsalis
ENSFCAG00000002156	HNRNPU	97	90.807	ENSSPUG00000011393	HNRNPU	90	90.432	Sphenodon_punctatus
ENSFCAG00000002156	HNRNPU	68	60.993	ENSSPAG00000011853	hnrnpub	78	58.730	Stegastes_partitus
ENSFCAG00000002156	HNRNPU	99	98.759	ENSSSCG00000010877	HNRNPU	100	98.759	Sus_scrofa
ENSFCAG00000002156	HNRNPU	70	61.140	ENSTRUG00000007759	hnrnpub	77	58.439	Takifugu_rubripes
ENSFCAG00000002156	HNRNPU	99	47.239	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSFCAG00000002156	HNRNPU	69	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSFCAG00000002156	HNRNPU	100	99.462	ENSUAMG00000021120	HNRNPU	100	99.462	Ursus_americanus
ENSFCAG00000002156	HNRNPU	99	86.104	ENSUMAG00000012322	HNRNPU	98	94.849	Ursus_maritimus
ENSFCAG00000002156	HNRNPU	86	96.396	ENSVPAG00000010520	HNRNPU	91	98.198	Vicugna_pacos
ENSFCAG00000002156	HNRNPU	99	99.380	ENSVVUG00000026524	HNRNPU	100	99.380	Vulpes_vulpes
ENSFCAG00000002156	HNRNPU	99	75.588	ENSXETG00000011386	hnrnpu	99	68.116	Xenopus_tropicalis
ENSFCAG00000002156	HNRNPU	74	54.332	ENSXMAG00000010356	hnrnpub	80	56.012	Xiphophorus_maculatus