EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000002168 (Gene tree)
Gene ID: 101094080
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 33381 bases
Position: chrF2:46513935-46547315
Accession: 101094080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000002005	POP1	PF06978.11	1.7e-38	1	2
ENSFCAP00000002005	POP1	PF06978.11	1.7e-38	2	2
ENSFCAP00000002005	POPLD	PF08170.12	4.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000002168	POP1-201	5216	XM_004000006	ENSFCAP00000002005	1017 (aa)	XP_004000055	M3VY14

Gene Model

Click here to download ENSFCAG00000002168's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03008	Ribosome biogenesis in eukaryotes	KEGG
fca03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000002168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000002168	POP1	100	84.180	ENSG00000104356	POP1	100	89.617	Homo_sapiens
ENSFCAG00000002168	POP1	100	48.859	ENSAPOG00000008198	pop1	100	48.295	Acanthochromis_polyacanthus
ENSFCAG00000002168	POP1	100	86.022	ENSAMEG00000000556	POP1	100	86.022	Ailuropoda_melanoleuca
ENSFCAG00000002168	POP1	100	47.064	ENSACIG00000004169	POP1	100	46.872	Amphilophus_citrinellus
ENSFCAG00000002168	POP1	100	48.008	ENSAOCG00000010991	pop1	100	48.102	Amphiprion_ocellaris
ENSFCAG00000002168	POP1	91	47.396	ENSAPEG00000007607	pop1	96	47.917	Amphiprion_percula
ENSFCAG00000002168	POP1	100	47.175	ENSATEG00000024814	POP1	100	46.981	Anabas_testudineus
ENSFCAG00000002168	POP1	92	62.739	ENSAPLG00000014418	POP1	99	62.606	Anas_platyrhynchos
ENSFCAG00000002168	POP1	100	56.339	ENSACAG00000016083	POP1	100	56.232	Anolis_carolinensis
ENSFCAG00000002168	POP1	88	87.834	ENSANAG00000026360	POP1	99	87.834	Aotus_nancymaae
ENSFCAG00000002168	POP1	100	47.328	ENSACLG00000010951	pop1	100	47.474	Astatotilapia_calliptera
ENSFCAG00000002168	POP1	100	46.488	ENSAMXG00000014483	POP1	100	46.488	Astyanax_mexicanus
ENSFCAG00000002168	POP1	100	81.514	ENSBTAG00000012596	POP1	100	81.514	Bos_taurus
ENSFCAG00000002168	POP1	100	82.031	ENSCJAG00000015567	POP1	100	82.031	Callithrix_jacchus
ENSFCAG00000002168	POP1	100	86.726	ENSCAFG00000000469	POP1	100	86.726	Canis_familiaris
ENSFCAG00000002168	POP1	100	88.004	ENSCAFG00020026765	POP1	100	88.004	Canis_lupus_dingo
ENSFCAG00000002168	POP1	100	82.318	ENSCHIG00000017066	POP1	100	82.318	Capra_hircus
ENSFCAG00000002168	POP1	100	82.422	ENSTSYG00000003097	POP1	100	82.422	Carlito_syrichta
ENSFCAG00000002168	POP1	100	76.579	ENSCAPG00000007251	POP1	100	76.579	Cavia_aperea
ENSFCAG00000002168	POP1	100	79.297	ENSCPOG00000002901	POP1	100	79.297	Cavia_porcellus
ENSFCAG00000002168	POP1	100	82.227	ENSCCAG00000018939	POP1	94	89.452	Cebus_capucinus
ENSFCAG00000002168	POP1	100	83.496	ENSCATG00000040916	POP1	100	83.496	Cercocebus_atys
ENSFCAG00000002168	POP1	100	80.957	ENSCLAG00000007208	POP1	97	80.957	Chinchilla_lanigera
ENSFCAG00000002168	POP1	90	83.839	ENSCSAG00000012340	POP1	99	83.839	Chlorocebus_sabaeus
ENSFCAG00000002168	POP1	95	79.012	ENSCHOG00000011432	POP1	99	79.012	Choloepus_hoffmanni
ENSFCAG00000002168	POP1	100	65.622	ENSCPBG00000006373	POP1	100	65.332	Chrysemys_picta_bellii
ENSFCAG00000002168	POP1	69	37.743	ENSCING00000008323	-	76	37.743	Ciona_intestinalis
ENSFCAG00000002168	POP1	100	83.594	ENSCANG00000001647	POP1	100	83.594	Colobus_angolensis_palliatus
ENSFCAG00000002168	POP1	100	75.512	ENSCGRG00001017308	Pop1	100	75.512	Cricetulus_griseus_chok1gshd
ENSFCAG00000002168	POP1	100	69.951	ENSCGRG00000010824	Pop1	100	69.951	Cricetulus_griseus_crigri
ENSFCAG00000002168	POP1	100	45.066	ENSCSEG00000008737	POP1	100	45.636	Cynoglossus_semilaevis
ENSFCAG00000002168	POP1	100	47.519	ENSCVAG00000022248	pop1	100	47.328	Cyprinodon_variegatus
ENSFCAG00000002168	POP1	100	78.368	ENSDNOG00000019974	POP1	100	78.368	Dasypus_novemcinctus
ENSFCAG00000002168	POP1	100	70.146	ENSDORG00000015384	Pop1	100	70.634	Dipodomys_ordii
ENSFCAG00000002168	POP1	61	33.697	FBgn0026702	l(1)G0045	70	33.593	Drosophila_melanogaster
ENSFCAG00000002168	POP1	89	69.649	ENSETEG00000007839	POP1	88	69.649	Echinops_telfairi
ENSFCAG00000002168	POP1	100	87.021	ENSEASG00005003189	POP1	98	87.021	Equus_asinus_asinus
ENSFCAG00000002168	POP1	100	86.824	ENSECAG00000024236	POP1	100	86.824	Equus_caballus
ENSFCAG00000002168	POP1	67	83.333	ENSEEUG00000003050	-	70	83.333	Erinaceus_europaeus
ENSFCAG00000002168	POP1	100	46.962	ENSELUG00000003526	pop1	100	47.546	Esox_lucius
ENSFCAG00000002168	POP1	100	60.000	ENSFALG00000005711	POP1	100	60.000	Ficedula_albicollis
ENSFCAG00000002168	POP1	100	79.883	ENSFDAG00000017068	POP1	100	79.883	Fukomys_damarensis
ENSFCAG00000002168	POP1	100	46.405	ENSFHEG00000019518	pop1	100	46.788	Fundulus_heteroclitus
ENSFCAG00000002168	POP1	92	46.488	ENSGMOG00000000659	POP1	97	46.170	Gadus_morhua
ENSFCAG00000002168	POP1	100	47.042	ENSGAFG00000019770	POP1	100	47.076	Gambusia_affinis
ENSFCAG00000002168	POP1	100	46.500	ENSGACG00000003499	pop1	100	46.227	Gasterosteus_aculeatus
ENSFCAG00000002168	POP1	100	64.466	ENSGAGG00000011737	POP1	98	64.175	Gopherus_agassizii
ENSFCAG00000002168	POP1	100	83.984	ENSGGOG00000003176	POP1	100	83.984	Gorilla_gorilla
ENSFCAG00000002168	POP1	100	47.283	ENSHBUG00000021583	pop1	100	47.137	Haplochromis_burtoni
ENSFCAG00000002168	POP1	100	80.176	ENSHGLG00000006029	POP1	100	80.176	Heterocephalus_glaber_female
ENSFCAG00000002168	POP1	100	80.176	ENSHGLG00100016879	POP1	100	80.176	Heterocephalus_glaber_male
ENSFCAG00000002168	POP1	90	49.411	ENSHCOG00000013888	pop1	96	49.303	Hippocampus_comes
ENSFCAG00000002168	POP1	100	45.396	ENSIPUG00000018336	pop1	100	44.528	Ictalurus_punctatus
ENSFCAG00000002168	POP1	100	81.836	ENSSTOG00000011455	POP1	97	81.836	Ictidomys_tridecemlineatus
ENSFCAG00000002168	POP1	100	76.031	ENSJJAG00000013325	Pop1	100	76.031	Jaculus_jaculus
ENSFCAG00000002168	POP1	100	46.494	ENSKMAG00000001346	POP1	100	46.577	Kryptolebias_marmoratus
ENSFCAG00000002168	POP1	89	49.075	ENSLBEG00000024457	POP1	95	48.879	Labrus_bergylta
ENSFCAG00000002168	POP1	93	55.152	ENSLACG00000012498	POP1	99	55.075	Latimeria_chalumnae
ENSFCAG00000002168	POP1	100	51.691	ENSLOCG00000009817	POP1	100	51.684	Lepisosteus_oculatus
ENSFCAG00000002168	POP1	100	82.181	ENSLAFG00000010770	POP1	100	82.181	Loxodonta_africana
ENSFCAG00000002168	POP1	100	83.496	ENSMFAG00000000347	POP1	100	83.496	Macaca_fascicularis
ENSFCAG00000002168	POP1	100	83.398	ENSMNEG00000036870	POP1	100	83.398	Macaca_nemestrina
ENSFCAG00000002168	POP1	100	83.398	ENSMLEG00000034986	POP1	100	83.398	Mandrillus_leucophaeus
ENSFCAG00000002168	POP1	100	47.483	ENSMAMG00000004040	pop1	100	47.805	Mastacembelus_armatus
ENSFCAG00000002168	POP1	100	47.424	ENSMZEG00005025448	pop1	100	47.569	Maylandia_zebra
ENSFCAG00000002168	POP1	100	58.223	ENSMGAG00000012167	POP1	100	58.318	Meleagris_gallopavo
ENSFCAG00000002168	POP1	100	75.707	ENSMAUG00000017537	Pop1	100	75.122	Mesocricetus_auratus
ENSFCAG00000002168	POP1	100	83.301	ENSMICG00000004361	POP1	100	83.691	Microcebus_murinus
ENSFCAG00000002168	POP1	100	74.976	ENSMOCG00000006356	Pop1	100	75.464	Microtus_ochrogaster
ENSFCAG00000002168	POP1	100	43.665	ENSMMOG00000018242	pop1	100	43.665	Mola_mola
ENSFCAG00000002168	POP1	100	68.569	ENSMODG00000006561	POP1	100	67.795	Monodelphis_domestica
ENSFCAG00000002168	POP1	100	47.660	ENSMALG00000012621	POP1	100	48.233	Monopterus_albus
ENSFCAG00000002168	POP1	100	74.437	MGP_CAROLIEiJ_G0019726	Pop1	100	74.437	Mus_caroli
ENSFCAG00000002168	POP1	100	75.391	ENSMUSG00000022325	Pop1	100	75.391	Mus_musculus
ENSFCAG00000002168	POP1	100	75.098	MGP_PahariEiJ_G0019735	Pop1	100	75.098	Mus_pahari
ENSFCAG00000002168	POP1	100	74.707	MGP_SPRETEiJ_G0020622	Pop1	100	74.707	Mus_spretus
ENSFCAG00000002168	POP1	100	87.757	ENSMPUG00000015250	POP1	100	87.757	Mustela_putorius_furo
ENSFCAG00000002168	POP1	100	79.784	ENSMLUG00000010204	POP1	100	79.784	Myotis_lucifugus
ENSFCAG00000002168	POP1	100	79.590	ENSNGAG00000001582	Pop1	100	79.590	Nannospalax_galili
ENSFCAG00000002168	POP1	89	48.272	ENSNBRG00000002356	pop1	94	48.291	Neolamprologus_brichardi
ENSFCAG00000002168	POP1	100	83.301	ENSNLEG00000002541	POP1	100	83.301	Nomascus_leucogenys
ENSFCAG00000002168	POP1	95	60.226	ENSMEUG00000003118	POP1	99	60.226	Notamacropus_eugenii
ENSFCAG00000002168	POP1	100	76.074	ENSOPRG00000007667	POP1	100	75.977	Ochotona_princeps
ENSFCAG00000002168	POP1	100	79.435	ENSODEG00000003984	POP1	100	79.435	Octodon_degus
ENSFCAG00000002168	POP1	100	47.810	ENSONIG00000016445	pop1	100	47.760	Oreochromis_niloticus
ENSFCAG00000002168	POP1	59	70.552	ENSOANG00000001278	-	94	70.552	Ornithorhynchus_anatinus
ENSFCAG00000002168	POP1	100	79.981	ENSOCUG00000017400	POP1	100	79.981	Oryctolagus_cuniculus
ENSFCAG00000002168	POP1	92	48.702	ENSORLG00000002839	pop1	100	46.692	Oryzias_latipes
ENSFCAG00000002168	POP1	90	49.412	ENSORLG00020022450	POP1	96	49.099	Oryzias_latipes_hni
ENSFCAG00000002168	POP1	92	49.110	ENSORLG00015012746	POP1	100	47.150	Oryzias_latipes_hsok
ENSFCAG00000002168	POP1	100	47.225	ENSOMEG00000006915	pop1	99	47.225	Oryzias_melastigma
ENSFCAG00000002168	POP1	100	80.664	ENSOGAG00000001466	POP1	100	80.664	Otolemur_garnettii
ENSFCAG00000002168	POP1	100	84.180	ENSPPAG00000018410	POP1	100	84.180	Pan_paniscus
ENSFCAG00000002168	POP1	100	98.330	ENSPPRG00000005002	POP1	100	98.330	Panthera_pardus
ENSFCAG00000002168	POP1	100	98.527	ENSPTIG00000016527	POP1	100	98.527	Panthera_tigris_altaica
ENSFCAG00000002168	POP1	100	84.180	ENSPTRG00000020458	POP1	100	84.180	Pan_troglodytes
ENSFCAG00000002168	POP1	100	83.301	ENSPANG00000009704	POP1	100	83.301	Papio_anubis
ENSFCAG00000002168	POP1	100	49.228	ENSPKIG00000016325	POP1	100	49.183	Paramormyrops_kingsleyae
ENSFCAG00000002168	POP1	100	63.654	ENSPSIG00000012343	POP1	100	63.460	Pelodiscus_sinensis
ENSFCAG00000002168	POP1	90	49.680	ENSPMGG00000022253	POP1	95	50.213	Periophthalmus_magnuspinnatus
ENSFCAG00000002168	POP1	99	75.240	ENSPEMG00000023633	Pop1	100	75.240	Peromyscus_maniculatus_bairdii
ENSFCAG00000002168	POP1	90	43.849	ENSPMAG00000003209	POP1	100	43.803	Petromyzon_marinus
ENSFCAG00000002168	POP1	100	67.985	ENSPCIG00000012216	POP1	100	67.985	Phascolarctos_cinereus
ENSFCAG00000002168	POP1	100	47.919	ENSPFOG00000012490	POP1	100	47.919	Poecilia_formosa
ENSFCAG00000002168	POP1	100	47.919	ENSPLAG00000004646	POP1	100	47.919	Poecilia_latipinna
ENSFCAG00000002168	POP1	100	48.015	ENSPMEG00000019592	POP1	100	48.015	Poecilia_mexicana
ENSFCAG00000002168	POP1	100	47.665	ENSPREG00000020951	POP1	100	47.665	Poecilia_reticulata
ENSFCAG00000002168	POP1	100	83.984	ENSPPYG00000018777	POP1	100	83.984	Pongo_abelii
ENSFCAG00000002168	POP1	100	76.293	ENSPCAG00000016662	POP1	100	75.512	Procavia_capensis
ENSFCAG00000002168	POP1	100	84.082	ENSPCOG00000019420	POP1	100	84.473	Propithecus_coquereli
ENSFCAG00000002168	POP1	100	84.578	ENSPVAG00000014468	POP1	100	84.578	Pteropus_vampyrus
ENSFCAG00000002168	POP1	89	48.321	ENSPNYG00000004476	pop1	97	47.817	Pundamilia_nyererei
ENSFCAG00000002168	POP1	100	46.118	ENSPNAG00000000265	pop1	100	43.796	Pygocentrus_nattereri
ENSFCAG00000002168	POP1	100	74.927	ENSRNOG00000005243	Pop1	100	74.927	Rattus_norvegicus
ENSFCAG00000002168	POP1	100	83.398	ENSRBIG00000007996	POP1	100	83.398	Rhinopithecus_bieti
ENSFCAG00000002168	POP1	100	83.594	ENSRROG00000012334	POP1	100	83.594	Rhinopithecus_roxellana
ENSFCAG00000002168	POP1	99	83.300	ENSSBOG00000020830	POP1	100	83.300	Saimiri_boliviensis_boliviensis
ENSFCAG00000002168	POP1	100	68.665	ENSSHAG00000000296	POP1	100	68.665	Sarcophilus_harrisii
ENSFCAG00000002168	POP1	100	48.412	ENSSFOG00015007429	pop1	99	48.412	Scleropages_formosus
ENSFCAG00000002168	POP1	86	53.272	ENSSMAG00000010467	POP1	98	48.351	Scophthalmus_maximus
ENSFCAG00000002168	POP1	100	47.388	ENSSDUG00000007817	POP1	100	47.388	Seriola_dumerili
ENSFCAG00000002168	POP1	100	47.398	ENSSLDG00000012565	POP1	100	47.398	Seriola_lalandi_dorsalis
ENSFCAG00000002168	POP1	100	58.869	ENSSPUG00000003550	-	100	58.967	Sphenodon_punctatus
ENSFCAG00000002168	POP1	90	49.623	ENSSPAG00000014955	pop1	94	49.678	Stegastes_partitus
ENSFCAG00000002168	POP1	100	82.498	ENSSSCG00000006078	POP1	100	82.498	Sus_scrofa
ENSFCAG00000002168	POP1	92	55.945	ENSTGUG00000012011	-	100	55.945	Taeniopygia_guttata
ENSFCAG00000002168	POP1	91	47.665	ENSTRUG00000010856	pop1	94	47.609	Takifugu_rubripes
ENSFCAG00000002168	POP1	93	48.457	ENSTNIG00000013297	pop1	99	48.457	Tetraodon_nigroviridis
ENSFCAG00000002168	POP1	95	78.131	ENSTBEG00000014214	POP1	99	78.131	Tupaia_belangeri
ENSFCAG00000002168	POP1	100	81.416	ENSTTRG00000016071	POP1	100	81.416	Tursiops_truncatus
ENSFCAG00000002168	POP1	99	83.101	ENSUAMG00000017309	POP1	100	83.101	Ursus_americanus
ENSFCAG00000002168	POP1	100	85.575	ENSUMAG00000016952	POP1	100	91.903	Ursus_maritimus
ENSFCAG00000002168	POP1	82	87.226	ENSVPAG00000008278	POP1	82	87.226	Vicugna_pacos
ENSFCAG00000002168	POP1	100	88.102	ENSVVUG00000010994	POP1	100	88.102	Vulpes_vulpes
ENSFCAG00000002168	POP1	100	43.118	ENSXCOG00000017043	POP1	100	43.118	Xiphophorus_couchianus
ENSFCAG00000002168	POP1	100	47.236	ENSXMAG00000002472	POP1	100	47.236	Xiphophorus_maculatus