EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000002177 (Gene tree)
Gene ID: 101093539
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 73683 bases
Position: chrC2:12846510-12920192
Accession: 101093539
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000002011	Npa1	PF11707.8	6.5e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000002177	URB1-201	6807	XM_011285748	ENSFCAP00000002011	2268 (aa)	XP_011284050	M3VY15

Gene Model

Click here to download ENSFCAG00000002177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000002177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000002177	URB1	99	82.369	ENSG00000142207	URB1	100	82.050	Homo_sapiens
ENSFCAG00000002177	URB1	99	42.489	ENSAPOG00000020308	urb1	99	42.489	Acanthochromis_polyacanthus
ENSFCAG00000002177	URB1	100	86.211	ENSAMEG00000011998	URB1	99	86.211	Ailuropoda_melanoleuca
ENSFCAG00000002177	URB1	93	45.643	ENSACIG00000003248	urb1	95	45.596	Amphilophus_citrinellus
ENSFCAG00000002177	URB1	99	40.583	ENSAOCG00000010364	urb1	99	40.626	Amphiprion_ocellaris
ENSFCAG00000002177	URB1	99	41.460	ENSAPEG00000010758	urb1	99	52.737	Amphiprion_percula
ENSFCAG00000002177	URB1	98	44.276	ENSATEG00000011790	urb1	96	44.276	Anabas_testudineus
ENSFCAG00000002177	URB1	97	56.072	ENSAPLG00000012791	URB1	100	56.208	Anas_platyrhynchos
ENSFCAG00000002177	URB1	99	52.423	ENSACAG00000002817	URB1	99	52.531	Anolis_carolinensis
ENSFCAG00000002177	URB1	100	81.214	ENSANAG00000024617	URB1	100	81.214	Aotus_nancymaae
ENSFCAG00000002177	URB1	99	44.356	ENSACLG00000024865	urb1	99	44.168	Astatotilapia_calliptera
ENSFCAG00000002177	URB1	99	40.070	ENSAMXG00000012306	urb1	99	39.842	Astyanax_mexicanus
ENSFCAG00000002177	URB1	99	79.684	ENSBTAG00000012412	URB1	99	79.596	Bos_taurus
ENSFCAG00000002177	URB1	100	81.203	ENSCJAG00000009118	URB1	100	81.072	Callithrix_jacchus
ENSFCAG00000002177	URB1	100	86.711	ENSCAFG00000008892	URB1	100	86.573	Canis_familiaris
ENSFCAG00000002177	URB1	100	85.746	ENSCAFG00020025994	-	100	85.727	Canis_lupus_dingo
ENSFCAG00000002177	URB1	100	86.714	ENSCAFG00020025987	-	100	86.696	Canis_lupus_dingo
ENSFCAG00000002177	URB1	99	78.850	ENSCHIG00000015645	URB1	99	78.850	Capra_hircus
ENSFCAG00000002177	URB1	100	80.632	ENSTSYG00000013286	URB1	99	80.713	Carlito_syrichta
ENSFCAG00000002177	URB1	98	75.349	ENSCAPG00000015589	URB1	99	75.304	Cavia_aperea
ENSFCAG00000002177	URB1	99	76.452	ENSCPOG00000006748	URB1	99	76.408	Cavia_porcellus
ENSFCAG00000002177	URB1	100	81.514	ENSCCAG00000021299	URB1	100	81.514	Cebus_capucinus
ENSFCAG00000002177	URB1	100	82.042	ENSCATG00000042630	URB1	100	81.962	Cercocebus_atys
ENSFCAG00000002177	URB1	99	78.458	ENSCLAG00000005262	URB1	99	78.458	Chinchilla_lanigera
ENSFCAG00000002177	URB1	100	79.930	ENSCSAG00000009584	URB1	100	79.851	Chlorocebus_sabaeus
ENSFCAG00000002177	URB1	99	58.700	ENSCPBG00000006454	URB1	99	58.533	Chrysemys_picta_bellii
ENSFCAG00000002177	URB1	100	81.646	ENSCANG00000031088	URB1	100	81.566	Colobus_angolensis_palliatus
ENSFCAG00000002177	URB1	99	74.632	ENSCGRG00001010616	Urb1	99	74.428	Cricetulus_griseus_chok1gshd
ENSFCAG00000002177	URB1	98	74.392	ENSCGRG00000015840	Urb1	99	74.392	Cricetulus_griseus_crigri
ENSFCAG00000002177	URB1	99	42.174	ENSCSEG00000012616	urb1	99	41.924	Cynoglossus_semilaevis
ENSFCAG00000002177	URB1	97	52.487	ENSCVAG00000009076	urb1	99	52.275	Cyprinodon_variegatus
ENSFCAG00000002177	URB1	99	43.841	ENSDARG00000060308	urb1	99	43.725	Danio_rerio
ENSFCAG00000002177	URB1	85	79.969	ENSDNOG00000015586	URB1	99	79.855	Dasypus_novemcinctus
ENSFCAG00000002177	URB1	99	77.846	ENSDORG00000006735	Urb1	99	77.758	Dipodomys_ordii
ENSFCAG00000002177	URB1	92	79.455	ENSETEG00000009080	URB1	92	79.455	Echinops_telfairi
ENSFCAG00000002177	URB1	100	83.399	ENSEASG00005007711	URB1	100	83.260	Equus_asinus_asinus
ENSFCAG00000002177	URB1	99	87.856	ENSECAG00000013206	URB1	100	90.482	Equus_caballus
ENSFCAG00000002177	URB1	58	87.083	ENSEEUG00000003626	-	57	87.083	Erinaceus_europaeus
ENSFCAG00000002177	URB1	99	44.922	ENSELUG00000020516	urb1	98	45.144	Esox_lucius
ENSFCAG00000002177	URB1	98	51.790	ENSFALG00000004636	URB1	99	51.857	Ficedula_albicollis
ENSFCAG00000002177	URB1	100	77.612	ENSFDAG00000007288	URB1	95	77.612	Fukomys_damarensis
ENSFCAG00000002177	URB1	99	41.714	ENSFHEG00000000202	urb1	99	42.470	Fundulus_heteroclitus
ENSFCAG00000002177	URB1	92	47.271	ENSGMOG00000001838	urb1	93	46.919	Gadus_morhua
ENSFCAG00000002177	URB1	99	56.055	ENSGALG00000015887	URB1	99	56.055	Gallus_gallus
ENSFCAG00000002177	URB1	94	52.814	ENSGAFG00000020694	urb1	98	52.489	Gambusia_affinis
ENSFCAG00000002177	URB1	99	44.640	ENSGACG00000011703	urb1	99	44.552	Gasterosteus_aculeatus
ENSFCAG00000002177	URB1	99	58.159	ENSGAGG00000022544	URB1	99	57.984	Gopherus_agassizii
ENSFCAG00000002177	URB1	100	81.998	ENSGGOG00000000285	URB1	100	81.918	Gorilla_gorilla
ENSFCAG00000002177	URB1	99	44.342	ENSHBUG00000001904	urb1	99	44.154	Haplochromis_burtoni
ENSFCAG00000002177	URB1	99	76.465	ENSHGLG00000004907	URB1	99	76.465	Heterocephalus_glaber_female
ENSFCAG00000002177	URB1	99	76.991	ENSHGLG00100010749	URB1	99	76.991	Heterocephalus_glaber_male
ENSFCAG00000002177	URB1	71	46.856	ENSHCOG00000018683	urb1	96	47.568	Hippocampus_comes
ENSFCAG00000002177	URB1	99	40.606	ENSIPUG00000014721	urb1	99	40.617	Ictalurus_punctatus
ENSFCAG00000002177	URB1	100	79.692	ENSSTOG00000004539	URB1	100	79.692	Ictidomys_tridecemlineatus
ENSFCAG00000002177	URB1	99	40.953	ENSKMAG00000006001	urb1	99	47.792	Kryptolebias_marmoratus
ENSFCAG00000002177	URB1	96	41.296	ENSLBEG00000027208	urb1	98	52.039	Labrus_bergylta
ENSFCAG00000002177	URB1	99	47.730	ENSLACG00000017059	URB1	100	47.773	Latimeria_chalumnae
ENSFCAG00000002177	URB1	99	46.181	ENSLOCG00000009190	urb1	99	46.181	Lepisosteus_oculatus
ENSFCAG00000002177	URB1	99	77.734	ENSLAFG00000010407	URB1	99	77.690	Loxodonta_africana
ENSFCAG00000002177	URB1	100	81.910	ENSMFAG00000034391	URB1	97	81.830	Macaca_fascicularis
ENSFCAG00000002177	URB1	100	81.778	ENSMMUG00000010295	URB1	100	81.698	Macaca_mulatta
ENSFCAG00000002177	URB1	100	80.458	ENSMNEG00000032981	URB1	100	80.378	Macaca_nemestrina
ENSFCAG00000002177	URB1	100	82.042	ENSMLEG00000041435	URB1	100	81.962	Mandrillus_leucophaeus
ENSFCAG00000002177	URB1	99	42.632	ENSMAMG00000011238	urb1	99	42.495	Mastacembelus_armatus
ENSFCAG00000002177	URB1	99	39.614	ENSMZEG00005011862	urb1	99	39.470	Maylandia_zebra
ENSFCAG00000002177	URB1	98	56.506	ENSMGAG00000014512	URB1	99	56.417	Meleagris_gallopavo
ENSFCAG00000002177	URB1	94	77.810	ENSMAUG00000010516	Urb1	99	77.810	Mesocricetus_auratus
ENSFCAG00000002177	URB1	99	80.900	ENSMICG00000016424	URB1	99	81.041	Microcebus_murinus
ENSFCAG00000002177	URB1	99	72.575	ENSMOCG00000012613	Urb1	99	72.575	Microtus_ochrogaster
ENSFCAG00000002177	URB1	99	63.756	ENSMODG00000021076	URB1	99	63.624	Monodelphis_domestica
ENSFCAG00000002177	URB1	93	52.542	ENSMALG00000017411	urb1	97	52.542	Monopterus_albus
ENSFCAG00000002177	URB1	99	73.295	MGP_CAROLIEiJ_G0020948	Urb1	99	73.272	Mus_caroli
ENSFCAG00000002177	URB1	99	73.536	ENSMUSG00000039929	Urb1	99	73.536	Mus_musculus
ENSFCAG00000002177	URB1	99	73.448	MGP_PahariEiJ_G0016653	Urb1	99	73.404	Mus_pahari
ENSFCAG00000002177	URB1	99	73.471	MGP_SPRETEiJ_G0021854	Urb1	99	73.404	Mus_spretus
ENSFCAG00000002177	URB1	100	85.249	ENSMPUG00000001123	URB1	100	85.154	Mustela_putorius_furo
ENSFCAG00000002177	URB1	99	73.624	ENSNGAG00000001905	Urb1	99	73.624	Nannospalax_galili
ENSFCAG00000002177	URB1	82	45.110	ENSNBRG00000001049	urb1	99	45.041	Neolamprologus_brichardi
ENSFCAG00000002177	URB1	99	80.336	ENSNLEG00000026872	URB1	100	79.982	Nomascus_leucogenys
ENSFCAG00000002177	URB1	93	65.267	ENSMEUG00000010828	URB1	96	58.718	Notamacropus_eugenii
ENSFCAG00000002177	URB1	99	72.879	ENSOPRG00000013482	URB1	99	72.791	Ochotona_princeps
ENSFCAG00000002177	URB1	100	76.396	ENSODEG00000002587	URB1	99	76.396	Octodon_degus
ENSFCAG00000002177	URB1	99	44.255	ENSONIG00000005599	urb1	99	44.255	Oreochromis_niloticus
ENSFCAG00000002177	URB1	99	78.707	ENSOCUG00000009381	URB1	99	78.619	Oryctolagus_cuniculus
ENSFCAG00000002177	URB1	99	43.644	ENSORLG00000003429	urb1	99	43.644	Oryzias_latipes
ENSFCAG00000002177	URB1	99	43.493	ENSORLG00020013785	urb1	99	43.493	Oryzias_latipes_hni
ENSFCAG00000002177	URB1	99	42.496	ENSORLG00015019421	urb1	99	48.459	Oryzias_latipes_hsok
ENSFCAG00000002177	URB1	76	50.941	ENSOMEG00000002094	urb1	97	50.941	Oryzias_melastigma
ENSFCAG00000002177	URB1	99	80.583	ENSOGAG00000017140	URB1	99	80.494	Otolemur_garnettii
ENSFCAG00000002177	URB1	97	79.694	ENSOARG00000013679	URB1	99	79.524	Ovis_aries
ENSFCAG00000002177	URB1	100	82.394	ENSPPAG00000003423	URB1	100	82.314	Pan_paniscus
ENSFCAG00000002177	URB1	100	97.532	ENSPPRG00000023131	URB1	100	97.532	Panthera_pardus
ENSFCAG00000002177	URB1	92	93.929	ENSPTIG00000016125	URB1	98	93.929	Panthera_tigris_altaica
ENSFCAG00000002177	URB1	100	82.262	ENSPTRG00000013852	URB1	100	82.182	Pan_troglodytes
ENSFCAG00000002177	URB1	100	82.086	ENSPANG00000021964	URB1	100	82.006	Papio_anubis
ENSFCAG00000002177	URB1	99	46.324	ENSPKIG00000003683	urb1	98	46.150	Paramormyrops_kingsleyae
ENSFCAG00000002177	URB1	99	74.009	ENSPEMG00000021205	Urb1	99	74.041	Peromyscus_maniculatus_bairdii
ENSFCAG00000002177	URB1	80	33.788	ENSPMAG00000009733	URB1	99	34.040	Petromyzon_marinus
ENSFCAG00000002177	URB1	99	63.433	ENSPCIG00000016350	URB1	99	63.821	Phascolarctos_cinereus
ENSFCAG00000002177	URB1	96	42.475	ENSPLAG00000004371	urb1	99	42.430	Poecilia_latipinna
ENSFCAG00000002177	URB1	99	43.078	ENSPMEG00000006634	urb1	99	43.078	Poecilia_mexicana
ENSFCAG00000002177	URB1	99	43.159	ENSPREG00000013453	urb1	99	43.159	Poecilia_reticulata
ENSFCAG00000002177	URB1	99	82.015	ENSPPYG00000011359	URB1	100	81.742	Pongo_abelii
ENSFCAG00000002177	URB1	99	67.432	ENSPCAG00000007430	URB1	99	67.344	Procavia_capensis
ENSFCAG00000002177	URB1	100	81.770	ENSPCOG00000022695	URB1	100	81.866	Propithecus_coquereli
ENSFCAG00000002177	URB1	100	81.110	ENSPVAG00000000889	URB1	100	81.057	Pteropus_vampyrus
ENSFCAG00000002177	URB1	99	43.059	ENSPNYG00000010589	urb1	99	42.838	Pundamilia_nyererei
ENSFCAG00000002177	URB1	99	40.971	ENSPNAG00000019324	urb1	99	40.822	Pygocentrus_nattereri
ENSFCAG00000002177	URB1	99	73.239	ENSRNOG00000002080	Urb1	99	73.371	Rattus_norvegicus
ENSFCAG00000002177	URB1	100	80.942	ENSRBIG00000033122	URB1	100	80.862	Rhinopithecus_bieti
ENSFCAG00000002177	URB1	100	80.942	ENSRROG00000040237	URB1	100	80.862	Rhinopithecus_roxellana
ENSFCAG00000002177	URB1	100	81.091	ENSSBOG00000027672	URB1	100	81.135	Saimiri_boliviensis_boliviensis
ENSFCAG00000002177	URB1	99	63.377	ENSSHAG00000005140	URB1	100	63.246	Sarcophilus_harrisii
ENSFCAG00000002177	URB1	93	46.335	ENSSFOG00015000339	urb1	99	46.378	Scleropages_formosus
ENSFCAG00000002177	URB1	99	44.079	ENSSMAG00000003782	urb1	99	44.211	Scophthalmus_maximus
ENSFCAG00000002177	URB1	99	44.605	ENSSDUG00000012313	urb1	99	44.692	Seriola_dumerili
ENSFCAG00000002177	URB1	99	44.561	ENSSLDG00000023179	urb1	99	44.561	Seriola_lalandi_dorsalis
ENSFCAG00000002177	URB1	99	54.889	ENSSPUG00000012447	URB1	99	55.135	Sphenodon_punctatus
ENSFCAG00000002177	URB1	99	43.404	ENSSPAG00000006325	urb1	99	43.448	Stegastes_partitus
ENSFCAG00000002177	URB1	100	80.686	ENSSSCG00000032024	URB1	100	80.422	Sus_scrofa
ENSFCAG00000002177	URB1	73	57.656	ENSTGUG00000013442	URB1	100	57.570	Taeniopygia_guttata
ENSFCAG00000002177	URB1	99	43.170	ENSTRUG00000009372	urb1	99	42.857	Takifugu_rubripes
ENSFCAG00000002177	URB1	99	42.147	ENSTNIG00000016277	urb1	99	42.096	Tetraodon_nigroviridis
ENSFCAG00000002177	URB1	81	84.928	ENSTBEG00000010044	URB1	81	84.928	Tupaia_belangeri
ENSFCAG00000002177	URB1	91	82.094	ENSTTRG00000007712	URB1	92	82.094	Tursiops_truncatus
ENSFCAG00000002177	URB1	100	86.432	ENSUAMG00000012231	URB1	99	86.432	Ursus_americanus
ENSFCAG00000002177	URB1	95	86.188	ENSUMAG00000017419	URB1	98	87.375	Ursus_maritimus
ENSFCAG00000002177	URB1	68	90.476	ENSVPAG00000001164	URB1	68	90.476	Vicugna_pacos
ENSFCAG00000002177	URB1	100	86.394	ENSVVUG00000000551	URB1	100	86.350	Vulpes_vulpes
ENSFCAG00000002177	URB1	99	49.546	ENSXETG00000009895	urb1	99	49.589	Xenopus_tropicalis
ENSFCAG00000002177	URB1	99	40.670	ENSXCOG00000005500	urb1	99	40.670	Xiphophorus_couchianus
ENSFCAG00000002177	URB1	99	41.015	ENSXMAG00000007253	urb1	99	41.015	Xiphophorus_maculatus