EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000002536 (Gene tree)
Gene ID: 101087312
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 30803 bases
Position: chrA3:85132264-85163066
Accession: 101087312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000040934	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000002536	RAB1A-202	522	-	ENSFCAP00000002335	173 (aa)	-	M3VYP9
ENSFCAT00000057517	RAB1A-203	426	-	ENSFCAP00000048053	141 (aa)	-	UPI000002B216
ENSFCAT00000060735	RAB1A-201	2453	XM_003984057	ENSFCAP00000040934	205 (aa)	XP_003984106	UPI0000001259
ENSFCAT00000050152	RAB1A-204	390	-	ENSFCAP00000043177	129 (aa)	-	UPI000002B217

Gene Model

Click here to download ENSFCAG00000002536's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000002536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000002536	RAB1A	77	39.752	ENSFCAG00000003937	RAB34	62	39.752
ENSFCAG00000002536	RAB1A	85	52.299	ENSFCAG00000030174	RAB11A	81	52.299
ENSFCAG00000002536	RAB1A	57	32.203	ENSFCAG00000000736	ARL8B	61	32.203
ENSFCAG00000002536	RAB1A	84	32.948	ENSFCAG00000044358	RAB23	73	32.948
ENSFCAG00000002536	RAB1A	80	47.619	ENSFCAG00000032091	RAB33A	71	47.619
ENSFCAG00000002536	RAB1A	90	48.108	ENSFCAG00000024352	RAB2A	99	45.238
ENSFCAG00000002536	RAB1A	88	46.703	ENSFCAG00000027161	RAB18	93	45.361
ENSFCAG00000002536	RAB1A	100	45.581	ENSFCAG00000015216	RAB11B	99	45.581
ENSFCAG00000002536	RAB1A	99	53.960	ENSFCAG00000032566	RAB35	100	53.960
ENSFCAG00000002536	RAB1A	84	35.028	ENSFCAG00000002990	HRAS	93	35.028
ENSFCAG00000002536	RAB1A	85	41.530	ENSFCAG00000037124	-	83	42.391
ENSFCAG00000002536	RAB1A	99	93.069	ENSFCAG00000036658	RAB1B	100	93.069
ENSFCAG00000002536	RAB1A	80	50.909	ENSFCAG00000045693	RAB15	78	50.909
ENSFCAG00000002536	RAB1A	99	44.554	ENSFCAG00000026542	RAB14	93	44.554
ENSFCAG00000002536	RAB1A	81	50.602	ENSFCAG00000014416	RAB30	82	50.602
ENSFCAG00000002536	RAB1A	94	38.384	ENSFCAG00000023834	RAB6A	94	38.384
ENSFCAG00000002536	RAB1A	57	31.092	ENSFCAG00000033226	ARL4C	58	31.092
ENSFCAG00000002536	RAB1A	75	30.380	ENSFCAG00000038919	DNAJC27	89	30.380
ENSFCAG00000002536	RAB1A	80	37.805	ENSFCAG00000026808	KRAS	95	35.912
ENSFCAG00000002536	RAB1A	69	32.215	ENSFCAG00000009907	-	73	32.215
ENSFCAG00000002536	RAB1A	86	43.820	ENSFCAG00000038920	RAB39B	84	43.820
ENSFCAG00000002536	RAB1A	82	32.544	ENSFCAG00000012862	RHEB	91	32.544
ENSFCAG00000002536	RAB1A	98	38.308	ENSFCAG00000012724	RAB17	93	38.308
ENSFCAG00000002536	RAB1A	87	32.973	ENSFCAG00000029875	RERG	90	32.973
ENSFCAG00000002536	RAB1A	94	36.410	ENSFCAG00000040897	RAB6B	94	36.410
ENSFCAG00000002536	RAB1A	75	35.948	ENSFCAG00000033642	-	67	35.948
ENSFCAG00000002536	RAB1A	95	42.564	ENSFCAG00000002148	RAB5C	89	42.564
ENSFCAG00000002536	RAB1A	57	34.746	ENSFCAG00000018232	ARL8A	63	35.052
ENSFCAG00000002536	RAB1A	95	43.814	ENSFCAG00000039795	-	90	43.814
ENSFCAG00000002536	RAB1A	81	46.988	ENSFCAG00000011775	RAB25	78	46.988
ENSFCAG00000002536	RAB1A	78	39.264	ENSFCAG00000022971	-	79	39.264
ENSFCAG00000002536	RAB1A	76	39.623	ENSFCAG00000023992	RAB9A	79	39.623
ENSFCAG00000002536	RAB1A	61	34.109	ENSFCAG00000045027	-	63	34.109
ENSFCAG00000002536	RAB1A	78	38.650	ENSFCAG00000002048	RAB36	50	38.650
ENSFCAG00000002536	RAB1A	89	33.673	ENSFCAG00000026623	MRAS	80	35.928
ENSFCAG00000002536	RAB1A	57	31.933	ENSFCAG00000035870	ARL4A	59	31.933
ENSFCAG00000002536	RAB1A	62	36.641	ENSFCAG00000004686	ARL14	65	36.641
ENSFCAG00000002536	RAB1A	80	38.415	ENSFCAG00000037994	NRAS	86	38.415
ENSFCAG00000002536	RAB1A	95	37.629	ENSFCAG00000046416	RAB22A	97	37.629
ENSFCAG00000002536	RAB1A	90	55.435	ENSFCAG00000045269	-	90	55.435
ENSFCAG00000002536	RAB1A	57	33.058	ENSFCAG00000038054	-	61	33.058
ENSFCAG00000002536	RAB1A	90	48.649	ENSFCAG00000007745	RAB2B	86	48.649
ENSFCAG00000002536	RAB1A	82	50.296	ENSFCAG00000027710	RAB12	50	50.296
ENSFCAG00000002536	RAB1A	76	39.623	ENSFCAG00000000424	RAB9B	79	39.623
ENSFCAG00000002536	RAB1A	95	38.144	ENSFCAG00000044912	RAB31	97	38.144

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000002536	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSFCAG00000002536	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSFCAG00000002536	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSFCAG00000002536	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSFCAG00000002536	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSFCAG00000002536	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSFCAG00000002536	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSFCAG00000002536	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSFCAG00000002536	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSFCAG00000002536	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSFCAG00000002536	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSFCAG00000002536	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSFCAG00000002536	RAB1A	96	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSFCAG00000002536	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSFCAG00000002536	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSFCAG00000002536	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSFCAG00000002536	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSFCAG00000002536	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSFCAG00000002536	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSFCAG00000002536	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSFCAG00000002536	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSFCAG00000002536	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSFCAG00000002536	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSFCAG00000002536	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSFCAG00000002536	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSFCAG00000002536	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSFCAG00000002536	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSFCAG00000002536	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSFCAG00000002536	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSFCAG00000002536	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSFCAG00000002536	RAB1A	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSFCAG00000002536	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSFCAG00000002536	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSFCAG00000002536	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSFCAG00000002536	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSFCAG00000002536	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSFCAG00000002536	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSFCAG00000002536	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSFCAG00000002536	RAB1A	99	97.549	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSFCAG00000002536	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSFCAG00000002536	RAB1A	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSFCAG00000002536	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSFCAG00000002536	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSFCAG00000002536	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSFCAG00000002536	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSFCAG00000002536	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSFCAG00000002536	RAB1A	96	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSFCAG00000002536	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSFCAG00000002536	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSFCAG00000002536	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSFCAG00000002536	RAB1A	96	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSFCAG00000002536	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSFCAG00000002536	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSFCAG00000002536	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSFCAG00000002536	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSFCAG00000002536	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSFCAG00000002536	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSFCAG00000002536	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSFCAG00000002536	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSFCAG00000002536	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSFCAG00000002536	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSFCAG00000002536	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSFCAG00000002536	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSFCAG00000002536	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSFCAG00000002536	RAB1A	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSFCAG00000002536	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSFCAG00000002536	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSFCAG00000002536	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSFCAG00000002536	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSFCAG00000002536	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSFCAG00000002536	RAB1A	96	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSFCAG00000002536	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSFCAG00000002536	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSFCAG00000002536	RAB1A	96	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSFCAG00000002536	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSFCAG00000002536	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSFCAG00000002536	RAB1A	99	96.552	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSFCAG00000002536	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSFCAG00000002536	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSFCAG00000002536	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSFCAG00000002536	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSFCAG00000002536	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSFCAG00000002536	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSFCAG00000002536	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSFCAG00000002536	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSFCAG00000002536	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSFCAG00000002536	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSFCAG00000002536	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSFCAG00000002536	RAB1A	98	98.010	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSFCAG00000002536	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSFCAG00000002536	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSFCAG00000002536	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSFCAG00000002536	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSFCAG00000002536	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSFCAG00000002536	RAB1A	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSFCAG00000002536	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSFCAG00000002536	RAB1A	96	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSFCAG00000002536	RAB1A	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSFCAG00000002536	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSFCAG00000002536	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus