EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000002693 (Gene tree)
Gene ID: 101087629
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 10547 bases
Position: chrE2:37012089-37022635
Accession: 101087629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000002479	HVSL	PF09749.9	3.4e-62	1	1
ENSFCAP00000050230	HVSL	PF09749.9	1.7e-50	1	2
ENSFCAP00000050230	HVSL	PF09749.9	1.7e-50	2	2
ENSFCAP00000040954	HVSL	PF09749.9	1.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000002693	USB1-201	1876	XM_003998082	ENSFCAP00000002479	267 (aa)	XP_003998131	M3VYZ4
ENSFCAT00000052239	USB1-202	750	-	ENSFCAP00000050230	249 (aa)	-	UPI0002990BD0
ENSFCAT00000053594	USB1-203	483	-	ENSFCAP00000040954	160 (aa)	-	UPI000DE7C0CC

Gene Model

Click here to download ENSFCAG00000002693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000002693's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000002693	USB1	100	84.644	ENSG00000103005	USB1	100	88.785	Homo_sapiens
ENSFCAG00000002693	USB1	98	46.595	ENSAPOG00000011942	usb1	83	50.215	Acanthochromis_polyacanthus
ENSFCAG00000002693	USB1	100	89.963	ENSAMEG00000017205	USB1	100	89.591	Ailuropoda_melanoleuca
ENSFCAG00000002693	USB1	85	53.982	ENSACIG00000012234	usb1	83	53.982	Amphilophus_citrinellus
ENSFCAG00000002693	USB1	87	51.502	ENSAOCG00000014831	usb1	82	51.502	Amphiprion_ocellaris
ENSFCAG00000002693	USB1	87	51.931	ENSAPEG00000000296	usb1	82	51.931	Amphiprion_percula
ENSFCAG00000002693	USB1	95	50.198	ENSATEG00000009348	usb1	83	52.137	Anabas_testudineus
ENSFCAG00000002693	USB1	84	70.485	ENSAPLG00000002756	USB1	100	70.354	Anas_platyrhynchos
ENSFCAG00000002693	USB1	85	62.445	ENSACAG00000015481	USB1	100	62.445	Anolis_carolinensis
ENSFCAG00000002693	USB1	100	83.895	ENSANAG00000035640	USB1	100	83.895	Aotus_nancymaae
ENSFCAG00000002693	USB1	88	51.282	ENSACLG00000020586	usb1	83	51.282	Astatotilapia_calliptera
ENSFCAG00000002693	USB1	84	50.667	ENSAMXG00000040146	usb1	75	50.667	Astyanax_mexicanus
ENSFCAG00000002693	USB1	100	85.019	ENSBTAG00000015758	USB1	100	85.019	Bos_taurus
ENSFCAG00000002693	USB1	100	86.142	ENSCJAG00000011733	USB1	100	86.142	Callithrix_jacchus
ENSFCAG00000002693	USB1	99	86.029	ENSCAFG00000008556	USB1	73	86.397	Canis_familiaris
ENSFCAG00000002693	USB1	99	86.090	ENSCAFG00020009263	USB1	99	81.159	Canis_lupus_dingo
ENSFCAG00000002693	USB1	100	84.270	ENSCHIG00000024290	USB1	100	84.270	Capra_hircus
ENSFCAG00000002693	USB1	100	88.015	ENSTSYG00000006997	USB1	100	88.015	Carlito_syrichta
ENSFCAG00000002693	USB1	86	72.897	ENSCAPG00000009057	USB1	100	72.897	Cavia_aperea
ENSFCAG00000002693	USB1	100	82.463	ENSCPOG00000014325	USB1	100	81.716	Cavia_porcellus
ENSFCAG00000002693	USB1	100	84.644	ENSCCAG00000022132	USB1	100	84.644	Cebus_capucinus
ENSFCAG00000002693	USB1	100	86.142	ENSCATG00000032174	USB1	100	86.142	Cercocebus_atys
ENSFCAG00000002693	USB1	66	89.205	ENSCLAG00000007363	USB1	100	89.205	Chinchilla_lanigera
ENSFCAG00000002693	USB1	100	86.891	ENSCSAG00000004783	USB1	100	86.891	Chlorocebus_sabaeus
ENSFCAG00000002693	USB1	100	60.498	ENSCPBG00000026943	USB1	100	61.511	Chrysemys_picta_bellii
ENSFCAG00000002693	USB1	84	30.932	ENSCING00000011490	-	86	30.932	Ciona_intestinalis
ENSFCAG00000002693	USB1	82	31.278	ENSCSAVG00000000894	-	81	31.278	Ciona_savignyi
ENSFCAG00000002693	USB1	100	85.393	ENSCANG00000037135	USB1	100	85.393	Colobus_angolensis_palliatus
ENSFCAG00000002693	USB1	100	83.209	ENSCGRG00001011243	USB1	100	83.209	Cricetulus_griseus_chok1gshd
ENSFCAG00000002693	USB1	100	83.209	ENSCGRG00000013252	USB1	100	83.209	Cricetulus_griseus_crigri
ENSFCAG00000002693	USB1	98	47.080	ENSCSEG00000013881	usb1	84	50.000	Cynoglossus_semilaevis
ENSFCAG00000002693	USB1	84	48.684	ENSCVAG00000009252	usb1	97	49.123	Cyprinodon_variegatus
ENSFCAG00000002693	USB1	84	50.893	ENSDARG00000003841	usb1	81	50.893	Danio_rerio
ENSFCAG00000002693	USB1	100	80.150	ENSDORG00000001888	Usb1	100	80.150	Dipodomys_ordii
ENSFCAG00000002693	USB1	76	38.350	FBgn0037713	CG16790	78	38.350	Drosophila_melanogaster
ENSFCAG00000002693	USB1	100	71.536	ENSETEG00000019682	USB1	100	71.536	Echinops_telfairi
ENSFCAG00000002693	USB1	83	50.000	ENSEBUG00000005889	usb1	78	50.000	Eptatretus_burgeri
ENSFCAG00000002693	USB1	100	88.390	ENSEASG00005005484	USB1	100	88.390	Equus_asinus_asinus
ENSFCAG00000002693	USB1	100	88.015	ENSECAG00000019493	USB1	91	88.015	Equus_caballus
ENSFCAG00000002693	USB1	66	80.682	ENSEEUG00000000154	USB1	66	80.682	Erinaceus_europaeus
ENSFCAG00000002693	USB1	88	47.234	ENSELUG00000010974	usb1	86	47.234	Esox_lucius
ENSFCAG00000002693	USB1	100	59.854	ENSFALG00000006876	USB1	99	62.825	Ficedula_albicollis
ENSFCAG00000002693	USB1	100	85.393	ENSFDAG00000010052	USB1	100	85.393	Fukomys_damarensis
ENSFCAG00000002693	USB1	87	48.366	ENSFHEG00000012334	usb1	80	50.495	Fundulus_heteroclitus
ENSFCAG00000002693	USB1	84	49.776	ENSGMOG00000004228	usb1	99	49.776	Gadus_morhua
ENSFCAG00000002693	USB1	84	68.304	ENSGALG00000035604	USB1	100	63.806	Gallus_gallus
ENSFCAG00000002693	USB1	98	46.931	ENSGAFG00000021890	usb1	84	50.000	Gambusia_affinis
ENSFCAG00000002693	USB1	93	47.791	ENSGACG00000003257	usb1	84	49.145	Gasterosteus_aculeatus
ENSFCAG00000002693	USB1	100	61.538	ENSGAGG00000022572	USB1	100	61.538	Gopherus_agassizii
ENSFCAG00000002693	USB1	100	85.393	ENSGGOG00000017147	USB1	100	85.393	Gorilla_gorilla
ENSFCAG00000002693	USB1	88	52.137	ENSHBUG00000009823	usb1	83	52.137	Haplochromis_burtoni
ENSFCAG00000002693	USB1	100	85.393	ENSHGLG00000016078	USB1	98	85.393	Heterocephalus_glaber_female
ENSFCAG00000002693	USB1	100	85.393	ENSHGLG00100005562	USB1	98	85.393	Heterocephalus_glaber_male
ENSFCAG00000002693	USB1	81	52.995	ENSHCOG00000015633	usb1	86	53.363	Hippocampus_comes
ENSFCAG00000002693	USB1	98	46.875	ENSIPUG00000008601	usb1	78	54.018	Ictalurus_punctatus
ENSFCAG00000002693	USB1	100	84.249	ENSSTOG00000007548	USB1	100	84.982	Ictidomys_tridecemlineatus
ENSFCAG00000002693	USB1	100	86.142	ENSJJAG00000021859	Usb1	100	86.142	Jaculus_jaculus
ENSFCAG00000002693	USB1	85	51.101	ENSKMAG00000007200	usb1	80	51.101	Kryptolebias_marmoratus
ENSFCAG00000002693	USB1	74	52.020	ENSLBEG00000008452	usb1	64	52.632	Labrus_bergylta
ENSFCAG00000002693	USB1	77	59.809	ENSLACG00000000105	USB1	72	60.287	Latimeria_chalumnae
ENSFCAG00000002693	USB1	94	53.200	ENSLOCG00000000465	usb1	88	53.846	Lepisosteus_oculatus
ENSFCAG00000002693	USB1	100	65.185	ENSLAFG00000002267	USB1	100	65.556	Loxodonta_africana
ENSFCAG00000002693	USB1	100	86.517	ENSMFAG00000003926	USB1	100	86.517	Macaca_fascicularis
ENSFCAG00000002693	USB1	100	86.517	ENSMMUG00000022669	USB1	100	86.517	Macaca_mulatta
ENSFCAG00000002693	USB1	100	86.142	ENSMNEG00000042487	USB1	100	86.142	Macaca_nemestrina
ENSFCAG00000002693	USB1	100	86.517	ENSMLEG00000028756	USB1	100	86.517	Mandrillus_leucophaeus
ENSFCAG00000002693	USB1	98	48.014	ENSMAMG00000015092	usb1	87	50.000	Mastacembelus_armatus
ENSFCAG00000002693	USB1	88	51.282	ENSMZEG00005010008	usb1	83	51.282	Maylandia_zebra
ENSFCAG00000002693	USB1	100	82.772	ENSMAUG00000007832	Usb1	100	82.772	Mesocricetus_auratus
ENSFCAG00000002693	USB1	100	86.142	ENSMICG00000004900	USB1	100	86.142	Microcebus_murinus
ENSFCAG00000002693	USB1	100	83.146	ENSMOCG00000022647	Usb1	100	83.146	Microtus_ochrogaster
ENSFCAG00000002693	USB1	85	51.754	ENSMMOG00000000490	usb1	88	51.754	Mola_mola
ENSFCAG00000002693	USB1	100	66.296	ENSMODG00000014067	USB1	100	65.672	Monodelphis_domestica
ENSFCAG00000002693	USB1	96	48.627	ENSMALG00000005930	usb1	86	50.410	Monopterus_albus
ENSFCAG00000002693	USB1	100	80.899	MGP_CAROLIEiJ_G0031421	Usb1	100	83.186	Mus_caroli
ENSFCAG00000002693	USB1	100	81.648	ENSMUSG00000031792	Usb1	100	84.956	Mus_musculus
ENSFCAG00000002693	USB1	100	82.397	MGP_PahariEiJ_G0023019	Usb1	100	86.325	Mus_pahari
ENSFCAG00000002693	USB1	100	80.899	MGP_SPRETEiJ_G0032540	Usb1	100	80.899	Mus_spretus
ENSFCAG00000002693	USB1	100	87.732	ENSMPUG00000004684	USB1	96	87.732	Mustela_putorius_furo
ENSFCAG00000002693	USB1	87	92.208	ENSMLUG00000007400	USB1	100	92.208	Myotis_lucifugus
ENSFCAG00000002693	USB1	100	85.130	ENSNGAG00000009703	Usb1	100	85.502	Nannospalax_galili
ENSFCAG00000002693	USB1	86	51.628	ENSNBRG00000008747	usb1	99	52.475	Neolamprologus_brichardi
ENSFCAG00000002693	USB1	100	83.125	ENSNLEG00000003340	USB1	100	85.317	Nomascus_leucogenys
ENSFCAG00000002693	USB1	94	59.477	ENSMEUG00000003328	-	100	59.477	Notamacropus_eugenii
ENSFCAG00000002693	USB1	63	87.879	ENSOPRG00000011803	USB1	72	87.879	Ochotona_princeps
ENSFCAG00000002693	USB1	100	80.150	ENSODEG00000016214	USB1	100	80.150	Octodon_degus
ENSFCAG00000002693	USB1	98	48.043	ENSONIG00000011063	usb1	84	51.709	Oreochromis_niloticus
ENSFCAG00000002693	USB1	87	72.650	ENSOANG00000012118	USB1	97	72.650	Ornithorhynchus_anatinus
ENSFCAG00000002693	USB1	89	47.521	ENSORLG00000012479	usb1	89	47.521	Oryzias_latipes
ENSFCAG00000002693	USB1	89	47.521	ENSORLG00020018671	usb1	89	47.521	Oryzias_latipes_hni
ENSFCAG00000002693	USB1	84	49.554	ENSORLG00015009679	usb1	99	46.097	Oryzias_latipes_hsok
ENSFCAG00000002693	USB1	84	50.446	ENSOMEG00000012930	usb1	99	46.909	Oryzias_melastigma
ENSFCAG00000002693	USB1	100	85.542	ENSOGAG00000003273	USB1	100	85.542	Otolemur_garnettii
ENSFCAG00000002693	USB1	93	85.425	ENSOARG00000001107	USB1	95	85.425	Ovis_aries
ENSFCAG00000002693	USB1	100	85.019	ENSPPAG00000042137	USB1	100	85.019	Pan_paniscus
ENSFCAG00000002693	USB1	100	98.502	ENSPPRG00000024797	USB1	100	98.502	Panthera_pardus
ENSFCAG00000002693	USB1	100	98.502	ENSPTIG00000007506	USB1	100	98.502	Panthera_tigris_altaica
ENSFCAG00000002693	USB1	100	84.337	ENSPTRG00000008172	USB1	100	89.720	Pan_troglodytes
ENSFCAG00000002693	USB1	100	86.517	ENSPANG00000025138	USB1	100	86.517	Papio_anubis
ENSFCAG00000002693	USB1	91	52.459	ENSPKIG00000015109	usb1	82	52.459	Paramormyrops_kingsleyae
ENSFCAG00000002693	USB1	84	51.515	ENSPSIG00000004305	USB1	100	52.018	Pelodiscus_sinensis
ENSFCAG00000002693	USB1	84	50.667	ENSPMGG00000017725	usb1	86	50.667	Periophthalmus_magnuspinnatus
ENSFCAG00000002693	USB1	100	82.721	ENSPEMG00000016183	Usb1	100	83.883	Peromyscus_maniculatus_bairdii
ENSFCAG00000002693	USB1	84	52.212	ENSPMAG00000000462	usb1	95	52.212	Petromyzon_marinus
ENSFCAG00000002693	USB1	98	47.500	ENSPFOG00000011130	usb1	84	50.427	Poecilia_formosa
ENSFCAG00000002693	USB1	98	46.786	ENSPLAG00000009820	usb1	84	49.573	Poecilia_latipinna
ENSFCAG00000002693	USB1	98	47.101	ENSPMEG00000006402	usb1	84	50.427	Poecilia_mexicana
ENSFCAG00000002693	USB1	86	47.984	ENSPREG00000001047	usb1	81	51.485	Poecilia_reticulata
ENSFCAG00000002693	USB1	95	81.890	ENSPPYG00000007401	USB1	100	81.890	Pongo_abelii
ENSFCAG00000002693	USB1	100	87.640	ENSPCOG00000022612	USB1	100	87.640	Propithecus_coquereli
ENSFCAG00000002693	USB1	100	83.146	ENSPVAG00000004613	USB1	100	83.146	Pteropus_vampyrus
ENSFCAG00000002693	USB1	88	52.137	ENSPNYG00000022262	usb1	83	52.137	Pundamilia_nyererei
ENSFCAG00000002693	USB1	84	51.339	ENSPNAG00000011736	usb1	76	51.339	Pygocentrus_nattereri
ENSFCAG00000002693	USB1	100	82.397	ENSRNOG00000013216	Usb1	100	82.397	Rattus_norvegicus
ENSFCAG00000002693	USB1	100	86.345	ENSRBIG00000044466	USB1	100	91.121	Rhinopithecus_bieti
ENSFCAG00000002693	USB1	100	86.517	ENSRROG00000029211	USB1	100	86.517	Rhinopithecus_roxellana
ENSFCAG00000002693	USB1	100	84.644	ENSSBOG00000029362	USB1	100	84.644	Saimiri_boliviensis_boliviensis
ENSFCAG00000002693	USB1	82	72.146	ENSSHAG00000006993	USB1	99	67.600	Sarcophilus_harrisii
ENSFCAG00000002693	USB1	85	56.828	ENSSFOG00015023663	usb1	71	56.828	Scleropages_formosus
ENSFCAG00000002693	USB1	91	47.909	ENSSMAG00000015834	usb1	89	47.909	Scophthalmus_maximus
ENSFCAG00000002693	USB1	85	53.982	ENSSDUG00000002949	usb1	99	49.635	Seriola_dumerili
ENSFCAG00000002693	USB1	98	48.679	ENSSLDG00000014174	usb1	83	52.137	Seriola_lalandi_dorsalis
ENSFCAG00000002693	USB1	80	66.355	ENSSPUG00000006741	USB1	100	66.355	Sphenodon_punctatus
ENSFCAG00000002693	USB1	98	46.479	ENSSPAG00000007484	usb1	82	50.644	Stegastes_partitus
ENSFCAG00000002693	USB1	100	85.874	ENSSSCG00000002807	USB1	100	85.874	Sus_scrofa
ENSFCAG00000002693	USB1	78	68.900	ENSTGUG00000004792	USB1	90	61.789	Taeniopygia_guttata
ENSFCAG00000002693	USB1	98	47.761	ENSTRUG00000021069	usb1	87	48.718	Takifugu_rubripes
ENSFCAG00000002693	USB1	98	46.388	ENSTNIG00000000626	usb1	98	46.008	Tetraodon_nigroviridis
ENSFCAG00000002693	USB1	87	59.914	ENSTBEG00000001507	USB1	100	59.914	Tupaia_belangeri
ENSFCAG00000002693	USB1	100	88.848	ENSUAMG00000016823	USB1	100	89.219	Ursus_americanus
ENSFCAG00000002693	USB1	80	90.187	ENSUMAG00000021369	USB1	100	90.187	Ursus_maritimus
ENSFCAG00000002693	USB1	94	51.656	ENSVPAG00000009834	-	59	90.000	Vicugna_pacos
ENSFCAG00000002693	USB1	99	87.687	ENSVVUG00000023700	USB1	95	87.755	Vulpes_vulpes
ENSFCAG00000002693	USB1	81	55.963	ENSXETG00000013795	usb1	89	56.054	Xenopus_tropicalis
ENSFCAG00000002693	USB1	97	47.490	ENSXMAG00000024687	usb1	67	50.877	Xiphophorus_maculatus