EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000002848 (Gene tree)
Gene ID: 101097241
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 18345 bases
Position: chrB2:146804762-146823106
Accession: 101097241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000002621	CAF1	PF04857.20	2.1e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000002848	PNLDC1-201	1977	XM_011282552	ENSFCAP00000002621	531 (aa)	XP_011280854	M3VZ91

Gene Model

Click here to download ENSFCAG00000002848's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000002848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000002848	PNLDC1	99	88.068	ENSG00000146453	PNLDC1	99	88.068	Homo_sapiens
ENSFCAG00000002848	PNLDC1	99	93.208	ENSAMEG00000015371	PNLDC1	99	93.208	Ailuropoda_melanoleuca
ENSFCAG00000002848	PNLDC1	95	60.429	ENSAPLG00000007014	PNLDC1	98	60.429	Anas_platyrhynchos
ENSFCAG00000002848	PNLDC1	99	59.659	ENSACAG00000013667	PNLDC1	99	59.659	Anolis_carolinensis
ENSFCAG00000002848	PNLDC1	100	86.817	ENSANAG00000034713	PNLDC1	100	87.867	Aotus_nancymaae
ENSFCAG00000002848	PNLDC1	95	92.445	ENSBTAG00000015166	PNLDC1	95	92.445	Bos_taurus
ENSFCAG00000002848	PNLDC1	100	86.441	ENSCJAG00000011865	PNLDC1	100	86.441	Callithrix_jacchus
ENSFCAG00000002848	PNLDC1	100	95.669	ENSCAFG00000000740	PNLDC1	100	95.669	Canis_familiaris
ENSFCAG00000002848	PNLDC1	100	93.032	ENSCAFG00020017742	PNLDC1	100	93.032	Canis_lupus_dingo
ENSFCAG00000002848	PNLDC1	100	89.306	ENSCHIG00000003141	PNLDC1	100	89.306	Capra_hircus
ENSFCAG00000002848	PNLDC1	100	85.687	ENSTSYG00000005606	PNLDC1	100	85.687	Carlito_syrichta
ENSFCAG00000002848	PNLDC1	100	63.089	ENSCAPG00000011893	PNLDC1	100	63.089	Cavia_aperea
ENSFCAG00000002848	PNLDC1	100	79.887	ENSCPOG00000019565	PNLDC1	100	79.887	Cavia_porcellus
ENSFCAG00000002848	PNLDC1	100	86.817	ENSCCAG00000026232	PNLDC1	100	86.817	Cebus_capucinus
ENSFCAG00000002848	PNLDC1	100	87.194	ENSCATG00000033196	PNLDC1	100	87.194	Cercocebus_atys
ENSFCAG00000002848	PNLDC1	99	85.985	ENSCLAG00000003228	PNLDC1	99	85.985	Chinchilla_lanigera
ENSFCAG00000002848	PNLDC1	97	86.628	ENSCSAG00000012478	PNLDC1	99	86.628	Chlorocebus_sabaeus
ENSFCAG00000002848	PNLDC1	96	67.188	ENSCPBG00000004050	PNLDC1	100	67.188	Chrysemys_picta_bellii
ENSFCAG00000002848	PNLDC1	95	87.352	ENSCANG00000043076	PNLDC1	97	87.352	Colobus_angolensis_palliatus
ENSFCAG00000002848	PNLDC1	100	82.486	ENSCGRG00001007470	-	99	82.486	Cricetulus_griseus_chok1gshd
ENSFCAG00000002848	PNLDC1	100	65.537	ENSCGRG00001011981	-	99	65.537	Cricetulus_griseus_chok1gshd
ENSFCAG00000002848	PNLDC1	100	82.486	ENSCGRG00000010221	-	99	82.486	Cricetulus_griseus_crigri
ENSFCAG00000002848	PNLDC1	100	68.173	ENSCGRG00000003103	-	99	68.173	Cricetulus_griseus_crigri
ENSFCAG00000002848	PNLDC1	100	88.158	ENSDNOG00000013709	PNLDC1	100	88.158	Dasypus_novemcinctus
ENSFCAG00000002848	PNLDC1	100	80.337	ENSDORG00000011517	Pnldc1	99	87.540	Dipodomys_ordii
ENSFCAG00000002848	PNLDC1	93	76.721	ENSETEG00000007587	PNLDC1	99	76.721	Echinops_telfairi
ENSFCAG00000002848	PNLDC1	100	84.486	ENSEASG00005019029	PNLDC1	100	84.486	Equus_asinus_asinus
ENSFCAG00000002848	PNLDC1	100	93.974	ENSECAG00000012898	PNLDC1	100	93.974	Equus_caballus
ENSFCAG00000002848	PNLDC1	67	81.250	ENSEEUG00000005717	-	86	81.250	Erinaceus_europaeus
ENSFCAG00000002848	PNLDC1	94	58.648	ENSFALG00000012081	PNLDC1	99	58.648	Ficedula_albicollis
ENSFCAG00000002848	PNLDC1	100	84.746	ENSFDAG00000021334	PNLDC1	100	84.746	Fukomys_damarensis
ENSFCAG00000002848	PNLDC1	79	60.095	ENSGALG00000011624	PNLDC1	82	60.095	Gallus_gallus
ENSFCAG00000002848	PNLDC1	99	67.992	ENSGAGG00000015276	PNLDC1	100	68.802	Gopherus_agassizii
ENSFCAG00000002848	PNLDC1	100	87.571	ENSGGOG00000014077	PNLDC1	100	87.571	Gorilla_gorilla
ENSFCAG00000002848	PNLDC1	100	86.252	ENSHGLG00000006889	PNLDC1	100	86.252	Heterocephalus_glaber_female
ENSFCAG00000002848	PNLDC1	100	86.252	ENSHGLG00100018275	PNLDC1	100	86.252	Heterocephalus_glaber_male
ENSFCAG00000002848	PNLDC1	99	89.773	ENSSTOG00000005595	PNLDC1	99	89.773	Ictidomys_tridecemlineatus
ENSFCAG00000002848	PNLDC1	99	79.962	ENSJJAG00000009937	Pnldc1	99	79.962	Jaculus_jaculus
ENSFCAG00000002848	PNLDC1	59	88.254	ENSLAFG00000030189	PNLDC1	92	88.254	Loxodonta_africana
ENSFCAG00000002848	PNLDC1	100	87.947	ENSMFAG00000041296	PNLDC1	100	87.947	Macaca_fascicularis
ENSFCAG00000002848	PNLDC1	100	87.947	ENSMMUG00000004181	PNLDC1	100	87.947	Macaca_mulatta
ENSFCAG00000002848	PNLDC1	100	87.759	ENSMNEG00000034271	PNLDC1	100	87.759	Macaca_nemestrina
ENSFCAG00000002848	PNLDC1	100	84.369	ENSMLEG00000044059	PNLDC1	100	84.369	Mandrillus_leucophaeus
ENSFCAG00000002848	PNLDC1	95	60.079	ENSMGAG00000012470	PNLDC1	97	60.079	Meleagris_gallopavo
ENSFCAG00000002848	PNLDC1	99	66.478	ENSMAUG00000012298	Pnldc1	100	66.478	Mesocricetus_auratus
ENSFCAG00000002848	PNLDC1	100	88.701	ENSMICG00000008021	PNLDC1	100	88.701	Microcebus_murinus
ENSFCAG00000002848	PNLDC1	100	87.430	ENSMOCG00000014287	Pnldc1	100	87.430	Microtus_ochrogaster
ENSFCAG00000002848	PNLDC1	99	76.850	ENSMODG00000007420	PNLDC1	99	76.850	Monodelphis_domestica
ENSFCAG00000002848	PNLDC1	100	87.194	MGP_CAROLIEiJ_G0021045	Pnldc1	100	87.194	Mus_caroli
ENSFCAG00000002848	PNLDC1	100	87.759	ENSMUSG00000073460	Pnldc1	100	90.805	Mus_musculus
ENSFCAG00000002848	PNLDC1	100	87.571	MGP_PahariEiJ_G0023361	Pnldc1	100	87.571	Mus_pahari
ENSFCAG00000002848	PNLDC1	100	87.382	MGP_SPRETEiJ_G0021975	Pnldc1	100	87.382	Mus_spretus
ENSFCAG00000002848	PNLDC1	99	94.329	ENSMPUG00000004920	PNLDC1	99	94.329	Mustela_putorius_furo
ENSFCAG00000002848	PNLDC1	100	89.642	ENSMLUG00000000747	PNLDC1	100	89.642	Myotis_lucifugus
ENSFCAG00000002848	PNLDC1	100	87.947	ENSNGAG00000017714	Pnldc1	99	87.947	Nannospalax_galili
ENSFCAG00000002848	PNLDC1	97	86.047	ENSNLEG00000011282	PNLDC1	99	86.047	Nomascus_leucogenys
ENSFCAG00000002848	PNLDC1	60	64.062	ENSMEUG00000011926	-	64	64.062	Notamacropus_eugenii
ENSFCAG00000002848	PNLDC1	54	68.056	ENSMEUG00000014042	-	100	68.056	Notamacropus_eugenii
ENSFCAG00000002848	PNLDC1	79	86.364	ENSOPRG00000003813	PNLDC1	79	86.364	Ochotona_princeps
ENSFCAG00000002848	PNLDC1	100	85.122	ENSODEG00000008047	PNLDC1	100	85.122	Octodon_degus
ENSFCAG00000002848	PNLDC1	99	58.223	ENSOANG00000012199	PNLDC1	99	60.302	Ornithorhynchus_anatinus
ENSFCAG00000002848	PNLDC1	100	87.571	ENSOCUG00000013867	PNLDC1	100	87.571	Oryctolagus_cuniculus
ENSFCAG00000002848	PNLDC1	99	89.015	ENSOGAG00000007331	PNLDC1	99	89.015	Otolemur_garnettii
ENSFCAG00000002848	PNLDC1	100	89.454	ENSOARG00000004585	PNLDC1	100	89.454	Ovis_aries
ENSFCAG00000002848	PNLDC1	100	87.194	ENSPPAG00000026651	PNLDC1	100	87.194	Pan_paniscus
ENSFCAG00000002848	PNLDC1	100	99.623	ENSPPRG00000012854	PNLDC1	100	99.623	Panthera_pardus
ENSFCAG00000002848	PNLDC1	99	93.939	ENSPTIG00000011501	PNLDC1	99	93.939	Panthera_tigris_altaica
ENSFCAG00000002848	PNLDC1	100	87.194	ENSPTRG00000018762	PNLDC1	100	87.194	Pan_troglodytes
ENSFCAG00000002848	PNLDC1	100	88.136	ENSPANG00000022009	PNLDC1	100	88.136	Papio_anubis
ENSFCAG00000002848	PNLDC1	100	88.136	ENSPEMG00000016301	Pnldc1	99	88.136	Peromyscus_maniculatus_bairdii
ENSFCAG00000002848	PNLDC1	83	78.815	ENSPCIG00000023412	PNLDC1	100	78.815	Phascolarctos_cinereus
ENSFCAG00000002848	PNLDC1	100	81.955	ENSPPYG00000017148	PNLDC1	100	81.955	Pongo_abelii
ENSFCAG00000002848	PNLDC1	99	78.072	ENSPCAG00000014169	PNLDC1	99	78.072	Procavia_capensis
ENSFCAG00000002848	PNLDC1	100	88.512	ENSPCOG00000025722	PNLDC1	100	88.512	Propithecus_coquereli
ENSFCAG00000002848	PNLDC1	73	96.883	ENSPVAG00000005325	PNLDC1	73	96.883	Pteropus_vampyrus
ENSFCAG00000002848	PNLDC1	100	87.759	ENSRNOG00000023140	Pnldc1	100	87.759	Rattus_norvegicus
ENSFCAG00000002848	PNLDC1	100	88.136	ENSRBIG00000033806	PNLDC1	100	88.136	Rhinopithecus_bieti
ENSFCAG00000002848	PNLDC1	95	87.945	ENSRROG00000043919	PNLDC1	97	87.945	Rhinopithecus_roxellana
ENSFCAG00000002848	PNLDC1	100	87.006	ENSSBOG00000019135	PNLDC1	100	87.006	Saimiri_boliviensis_boliviensis
ENSFCAG00000002848	PNLDC1	96	76.772	ENSSHAG00000015192	PNLDC1	97	76.772	Sarcophilus_harrisii
ENSFCAG00000002848	PNLDC1	54	67.133	ENSSPUG00000004627	PNLDC1	99	66.518	Sphenodon_punctatus
ENSFCAG00000002848	PNLDC1	96	89.020	ENSSSCG00000004046	PNLDC1	99	89.020	Sus_scrofa
ENSFCAG00000002848	PNLDC1	91	60.000	ENSTGUG00000011418	PNLDC1	99	60.000	Taeniopygia_guttata
ENSFCAG00000002848	PNLDC1	96	78.627	ENSTBEG00000009131	PNLDC1	98	78.627	Tupaia_belangeri
ENSFCAG00000002848	PNLDC1	73	86.269	ENSTTRG00000010409	PNLDC1	73	86.269	Tursiops_truncatus
ENSFCAG00000002848	PNLDC1	99	79.963	ENSUAMG00000015783	PNLDC1	99	79.963	Ursus_americanus
ENSFCAG00000002848	PNLDC1	95	85.265	ENSUMAG00000011903	PNLDC1	99	85.265	Ursus_maritimus
ENSFCAG00000002848	PNLDC1	98	94.455	ENSVVUG00000006586	PNLDC1	99	95.277	Vulpes_vulpes