EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000003499 (Gene tree)
Gene ID: 101096859
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 42528 bases
Position: chrE1:48052779-48095306
Accession: 101096859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000050221	ResIII	PF04851.15	7.3e-07	1	1
ENSFCAP00000003228	ResIII	PF04851.15	1.3e-06	1	1
ENSFCAP00000003228	DEAD	PF00270.29	5.4e-50	1	1
ENSFCAP00000050221	DEAD	PF00270.29	7.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000052171	DDX42-201	3866	XM_006940486	ENSFCAP00000050221	934 (aa)	XP_006940548	UPI000299002F
ENSFCAT00000003499	DDX42-202	5642	XM_019818093	ENSFCAP00000003228	809 (aa)	XP_019673652	M3W0G2

Gene Model

Click here to download ENSFCAG00000003499's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000003499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000003499	DDX42	52	36.490	ENSFCAG00000031631	-	67	36.636
ENSFCAG00000003499	DDX42	53	43.880	ENSFCAG00000031570	DDX17	87	43.750
ENSFCAG00000003499	DDX42	50	38.889	ENSFCAG00000012560	DDX4	77	36.957
ENSFCAG00000003499	DDX42	51	33.729	ENSFCAG00000027373	DDX59	66	33.729
ENSFCAG00000003499	DDX42	55	38.612	ENSFCAG00000001542	DDX41	73	38.612
ENSFCAG00000003499	DDX42	67	38.214	ENSFCAG00000003512	DDX5	78	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000003499	DDX42	100	96.592	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSFCAG00000003499	DDX42	90	76.561	ENSAPOG00000017675	ddx42	94	75.289	Acanthochromis_polyacanthus
ENSFCAG00000003499	DDX42	100	98.396	ENSAMEG00000003200	DDX42	100	98.396	Ailuropoda_melanoleuca
ENSFCAG00000003499	DDX42	98	72.075	ENSACIG00000007376	ddx42	99	71.698	Amphilophus_citrinellus
ENSFCAG00000003499	DDX42	100	71.716	ENSAOCG00000003520	ddx42	99	72.275	Amphiprion_ocellaris
ENSFCAG00000003499	DDX42	93	75.316	ENSAPEG00000000984	ddx42	99	72.051	Amphiprion_percula
ENSFCAG00000003499	DDX42	99	71.353	ENSATEG00000022920	ddx42	99	71.852	Anabas_testudineus
ENSFCAG00000003499	DDX42	100	84.900	ENSAPLG00000010544	DDX42	100	83.281	Anas_platyrhynchos
ENSFCAG00000003499	DDX42	100	84.820	ENSACAG00000003994	DDX42	99	84.322	Anolis_carolinensis
ENSFCAG00000003499	DDX42	100	97.112	ENSANAG00000035693	DDX42	99	98.295	Aotus_nancymaae
ENSFCAG00000003499	DDX42	89	77.300	ENSACLG00000025113	ddx42	99	72.051	Astatotilapia_calliptera
ENSFCAG00000003499	DDX42	81	80.871	ENSAMXG00000011435	ddx42	99	69.317	Astyanax_mexicanus
ENSFCAG00000003499	DDX42	100	95.987	ENSBTAG00000021058	DDX42	100	95.987	Bos_taurus
ENSFCAG00000003499	DDX42	70	53.679	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSFCAG00000003499	DDX42	100	97.112	ENSCJAG00000019649	DDX42	99	98.956	Callithrix_jacchus
ENSFCAG00000003499	DDX42	100	98.715	ENSCAFG00000012818	DDX42	100	98.715	Canis_familiaris
ENSFCAG00000003499	DDX42	100	98.822	ENSCAFG00020026631	DDX42	100	98.822	Canis_lupus_dingo
ENSFCAG00000003499	DDX42	100	97.125	ENSCHIG00000014431	DDX42	100	97.125	Capra_hircus
ENSFCAG00000003499	DDX42	100	96.154	ENSTSYG00000001380	DDX42	100	96.154	Carlito_syrichta
ENSFCAG00000003499	DDX42	86	77.011	ENSCAPG00000013621	DDX42	97	77.011	Cavia_aperea
ENSFCAG00000003499	DDX42	100	96.154	ENSCPOG00000005633	DDX42	100	96.154	Cavia_porcellus
ENSFCAG00000003499	DDX42	98	96.334	ENSCCAG00000020612	DDX42	100	96.547	Cebus_capucinus
ENSFCAG00000003499	DDX42	100	97.109	ENSCATG00000030490	DDX42	100	97.109	Cercocebus_atys
ENSFCAG00000003499	DDX42	100	97.005	ENSCLAG00000003497	DDX42	100	97.005	Chinchilla_lanigera
ENSFCAG00000003499	DDX42	100	93.008	ENSCSAG00000003914	DDX42	100	93.008	Chlorocebus_sabaeus
ENSFCAG00000003499	DDX42	79	95.536	ENSCHOG00000006241	DDX42	79	95.536	Choloepus_hoffmanni
ENSFCAG00000003499	DDX42	100	85.042	ENSCPBG00000026682	DDX42	100	83.351	Chrysemys_picta_bellii
ENSFCAG00000003499	DDX42	55	66.219	ENSCING00000001837	-	94	67.832	Ciona_intestinalis
ENSFCAG00000003499	DDX42	100	97.216	ENSCANG00000034663	DDX42	99	98.705	Colobus_angolensis_palliatus
ENSFCAG00000003499	DDX42	100	95.080	ENSCGRG00001009775	Ddx42	100	95.080	Cricetulus_griseus_chok1gshd
ENSFCAG00000003499	DDX42	100	95.080	ENSCGRG00000011718	Ddx42	100	95.080	Cricetulus_griseus_crigri
ENSFCAG00000003499	DDX42	91	74.209	ENSCSEG00000021574	ddx42	99	70.469	Cynoglossus_semilaevis
ENSFCAG00000003499	DDX42	99	70.394	ENSCVAG00000011404	ddx42	99	70.644	Cyprinodon_variegatus
ENSFCAG00000003499	DDX42	100	69.381	ENSDARG00000037928	ddx42	99	70.742	Danio_rerio
ENSFCAG00000003499	DDX42	100	90.192	ENSDNOG00000007961	DDX42	100	90.192	Dasypus_novemcinctus
ENSFCAG00000003499	DDX42	98	91.688	ENSDORG00000004199	Ddx42	100	87.953	Dipodomys_ordii
ENSFCAG00000003499	DDX42	71	59.835	FBgn0036104	CG6418	87	55.908	Drosophila_melanogaster
ENSFCAG00000003499	DDX42	80	73.342	ENSEBUG00000001155	ddx42	91	72.812	Eptatretus_burgeri
ENSFCAG00000003499	DDX42	100	98.824	ENSEASG00005013089	DDX42	100	98.824	Equus_asinus_asinus
ENSFCAG00000003499	DDX42	100	99.037	ENSECAG00000022684	DDX42	100	99.037	Equus_caballus
ENSFCAG00000003499	DDX42	67	100.000	ENSEEUG00000009144	DDX42	82	100.000	Erinaceus_europaeus
ENSFCAG00000003499	DDX42	100	70.242	ENSELUG00000020593	ddx42	100	69.543	Esox_lucius
ENSFCAG00000003499	DDX42	94	84.650	ENSFALG00000004675	DDX42	72	90.378	Ficedula_albicollis
ENSFCAG00000003499	DDX42	100	96.905	ENSFDAG00000020516	DDX42	100	96.905	Fukomys_damarensis
ENSFCAG00000003499	DDX42	99	68.980	ENSFHEG00000023290	ddx42	99	69.905	Fundulus_heteroclitus
ENSFCAG00000003499	DDX42	75	78.138	ENSGMOG00000004595	ddx42	79	77.574	Gadus_morhua
ENSFCAG00000003499	DDX42	100	83.576	ENSGALG00000000581	DDX42	100	81.391	Gallus_gallus
ENSFCAG00000003499	DDX42	89	74.822	ENSGAFG00000011846	ddx42	91	75.866	Gambusia_affinis
ENSFCAG00000003499	DDX42	99	68.657	ENSGACG00000009782	ddx42	99	66.702	Gasterosteus_aculeatus
ENSFCAG00000003499	DDX42	100	85.325	ENSGAGG00000024411	DDX42	99	83.107	Gopherus_agassizii
ENSFCAG00000003499	DDX42	100	97.002	ENSGGOG00000006779	DDX42	100	97.002	Gorilla_gorilla
ENSFCAG00000003499	DDX42	89	77.539	ENSHBUG00000008705	ddx42	99	72.264	Haplochromis_burtoni
ENSFCAG00000003499	DDX42	100	92.505	ENSHGLG00000010024	DDX42	100	92.505	Heterocephalus_glaber_female
ENSFCAG00000003499	DDX42	97	73.858	ENSHGLG00100007138	-	95	73.829	Heterocephalus_glaber_male
ENSFCAG00000003499	DDX42	100	97.430	ENSHGLG00100004479	-	100	97.430	Heterocephalus_glaber_male
ENSFCAG00000003499	DDX42	83	78.562	ENSHCOG00000003357	ddx42	91	78.333	Hippocampus_comes
ENSFCAG00000003499	DDX42	80	79.657	ENSIPUG00000013327	ddx42	100	69.223	Ictalurus_punctatus
ENSFCAG00000003499	DDX42	100	97.972	ENSSTOG00000008922	DDX42	100	97.972	Ictidomys_tridecemlineatus
ENSFCAG00000003499	DDX42	100	95.615	ENSJJAG00000011727	Ddx42	100	95.615	Jaculus_jaculus
ENSFCAG00000003499	DDX42	83	79.315	ENSKMAG00000009914	ddx42	99	71.186	Kryptolebias_marmoratus
ENSFCAG00000003499	DDX42	89	71.143	ENSLBEG00000004687	ddx42	99	66.526	Labrus_bergylta
ENSFCAG00000003499	DDX42	99	76.282	ENSLACG00000013476	DDX42	97	77.766	Latimeria_chalumnae
ENSFCAG00000003499	DDX42	100	74.359	ENSLOCG00000011764	ddx42	100	74.386	Lepisosteus_oculatus
ENSFCAG00000003499	DDX42	100	97.540	ENSLAFG00000003249	DDX42	100	97.540	Loxodonta_africana
ENSFCAG00000003499	DDX42	100	97.109	ENSMFAG00000031356	DDX42	100	97.109	Macaca_fascicularis
ENSFCAG00000003499	DDX42	100	96.360	ENSMMUG00000016762	DDX42	100	96.360	Macaca_mulatta
ENSFCAG00000003499	DDX42	100	97.109	ENSMNEG00000038250	DDX42	100	97.109	Macaca_nemestrina
ENSFCAG00000003499	DDX42	100	96.805	ENSMLEG00000043080	DDX42	100	96.805	Mandrillus_leucophaeus
ENSFCAG00000003499	DDX42	90	77.305	ENSMAMG00000021888	ddx42	98	71.504	Mastacembelus_armatus
ENSFCAG00000003499	DDX42	89	77.300	ENSMZEG00005023103	ddx42	99	72.051	Maylandia_zebra
ENSFCAG00000003499	DDX42	100	83.351	ENSMGAG00000001822	DDX42	100	81.595	Meleagris_gallopavo
ENSFCAG00000003499	DDX42	85	97.222	ENSMAUG00000020774	-	94	97.443	Mesocricetus_auratus
ENSFCAG00000003499	DDX42	100	97.754	ENSMICG00000009952	DDX42	100	97.112	Microcebus_murinus
ENSFCAG00000003499	DDX42	100	94.225	ENSMOCG00000015504	Ddx42	100	94.118	Microtus_ochrogaster
ENSFCAG00000003499	DDX42	89	72.381	ENSMMOG00000016963	ddx42	84	72.575	Mola_mola
ENSFCAG00000003499	DDX42	50	97.859	ENSMODG00000009917	-	98	97.859	Monodelphis_domestica
ENSFCAG00000003499	DDX42	99	71.868	ENSMALG00000007800	ddx42	99	71.702	Monopterus_albus
ENSFCAG00000003499	DDX42	100	96.150	MGP_CAROLIEiJ_G0017314	Ddx42	100	96.150	Mus_caroli
ENSFCAG00000003499	DDX42	100	96.150	ENSMUSG00000020705	Ddx42	100	96.150	Mus_musculus
ENSFCAG00000003499	DDX42	80	99.404	MGP_PahariEiJ_G0018444	-	100	99.404	Mus_pahari
ENSFCAG00000003499	DDX42	100	96.150	MGP_SPRETEiJ_G0018158	Ddx42	100	96.150	Mus_spretus
ENSFCAG00000003499	DDX42	100	98.617	ENSMPUG00000014921	DDX42	100	98.617	Mustela_putorius_furo
ENSFCAG00000003499	DDX42	100	96.628	ENSMLUG00000011645	DDX42	100	96.628	Myotis_lucifugus
ENSFCAG00000003499	DDX42	100	95.615	ENSNGAG00000021897	Ddx42	100	95.615	Nannospalax_galili
ENSFCAG00000003499	DDX42	89	75.986	ENSNBRG00000004466	ddx42	99	70.882	Neolamprologus_brichardi
ENSFCAG00000003499	DDX42	100	97.002	ENSNLEG00000004248	DDX42	99	98.563	Nomascus_leucogenys
ENSFCAG00000003499	DDX42	83	81.996	ENSMEUG00000013227	-	85	82.788	Notamacropus_eugenii
ENSFCAG00000003499	DDX42	100	96.055	ENSOPRG00000014960	DDX42	100	96.055	Ochotona_princeps
ENSFCAG00000003499	DDX42	100	93.262	ENSODEG00000007810	DDX42	100	93.262	Octodon_degus
ENSFCAG00000003499	DDX42	89	77.300	ENSONIG00000000734	ddx42	99	72.051	Oreochromis_niloticus
ENSFCAG00000003499	DDX42	64	92.218	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSFCAG00000003499	DDX42	95	96.521	ENSOCUG00000004304	DDX42	88	96.521	Oryctolagus_cuniculus
ENSFCAG00000003499	DDX42	100	70.304	ENSORLG00000002395	ddx42	100	69.280	Oryzias_latipes
ENSFCAG00000003499	DDX42	100	71.247	ENSORLG00020011621	ddx42	100	71.550	Oryzias_latipes_hni
ENSFCAG00000003499	DDX42	100	71.036	ENSORLG00015004487	ddx42	100	70.917	Oryzias_latipes_hsok
ENSFCAG00000003499	DDX42	83	80.334	ENSOMEG00000020093	ddx42	100	70.545	Oryzias_melastigma
ENSFCAG00000003499	DDX42	100	97.228	ENSOGAG00000006872	DDX42	100	97.228	Otolemur_garnettii
ENSFCAG00000003499	DDX42	100	96.308	ENSOARG00000013540	DDX42	100	96.308	Ovis_aries
ENSFCAG00000003499	DDX42	100	97.216	ENSPPAG00000007496	DDX42	100	97.216	Pan_paniscus
ENSFCAG00000003499	DDX42	100	99.786	ENSPPRG00000002740	DDX42	100	99.786	Panthera_pardus
ENSFCAG00000003499	DDX42	100	99.465	ENSPTIG00000009932	DDX42	100	99.465	Panthera_tigris_altaica
ENSFCAG00000003499	DDX42	100	97.216	ENSPTRG00000009523	DDX42	100	97.216	Pan_troglodytes
ENSFCAG00000003499	DDX42	100	97.109	ENSPANG00000020990	DDX42	100	97.109	Papio_anubis
ENSFCAG00000003499	DDX42	100	69.723	ENSPKIG00000002901	ddx42	99	69.377	Paramormyrops_kingsleyae
ENSFCAG00000003499	DDX42	86	92.422	ENSPSIG00000010289	DDX42	98	92.118	Pelodiscus_sinensis
ENSFCAG00000003499	DDX42	100	66.808	ENSPMGG00000009323	ddx42	100	68.410	Periophthalmus_magnuspinnatus
ENSFCAG00000003499	DDX42	100	95.299	ENSPEMG00000006755	Ddx42	100	95.299	Peromyscus_maniculatus_bairdii
ENSFCAG00000003499	DDX42	80	72.346	ENSPMAG00000005580	ddx42	100	72.477	Petromyzon_marinus
ENSFCAG00000003499	DDX42	100	92.275	ENSPCIG00000009093	DDX42	100	91.323	Phascolarctos_cinereus
ENSFCAG00000003499	DDX42	99	70.417	ENSPFOG00000014104	ddx42	99	70.785	Poecilia_formosa
ENSFCAG00000003499	DDX42	100	70.343	ENSPLAG00000010522	ddx42	99	70.785	Poecilia_latipinna
ENSFCAG00000003499	DDX42	100	70.668	ENSPMEG00000010744	ddx42	99	70.890	Poecilia_mexicana
ENSFCAG00000003499	DDX42	100	70.186	ENSPREG00000009926	ddx42	99	69.763	Poecilia_reticulata
ENSFCAG00000003499	DDX42	100	94.910	ENSPPYG00000008531	DDX42	100	94.910	Pongo_abelii
ENSFCAG00000003499	DDX42	96	93.188	ENSPCAG00000002474	DDX42	100	91.986	Procavia_capensis
ENSFCAG00000003499	DDX42	100	88.128	ENSPCOG00000001559	DDX42	99	89.260	Propithecus_coquereli
ENSFCAG00000003499	DDX42	100	94.124	ENSPVAG00000000160	DDX42	100	94.124	Pteropus_vampyrus
ENSFCAG00000003499	DDX42	87	74.406	ENSPNYG00000013954	ddx42	99	69.071	Pundamilia_nyererei
ENSFCAG00000003499	DDX42	74	84.080	ENSPNAG00000017352	ddx42	99	69.413	Pygocentrus_nattereri
ENSFCAG00000003499	DDX42	100	95.508	ENSRNOG00000009474	Ddx42	100	95.508	Rattus_norvegicus
ENSFCAG00000003499	DDX42	100	97.109	ENSRBIG00000004781	DDX42	99	98.561	Rhinopithecus_bieti
ENSFCAG00000003499	DDX42	100	97.109	ENSRROG00000029794	DDX42	100	97.109	Rhinopithecus_roxellana
ENSFCAG00000003499	DDX42	100	97.112	ENSSBOG00000029624	DDX42	100	97.112	Saimiri_boliviensis_boliviensis
ENSFCAG00000003499	DDX42	82	62.166	ENSSHAG00000007919	-	99	60.979	Sarcophilus_harrisii
ENSFCAG00000003499	DDX42	100	92.381	ENSSHAG00000012896	-	100	91.429	Sarcophilus_harrisii
ENSFCAG00000003499	DDX42	82	80.438	ENSSFOG00015014064	ddx42	83	80.438	Scleropages_formosus
ENSFCAG00000003499	DDX42	90	75.708	ENSSMAG00000009077	ddx42	99	70.619	Scophthalmus_maximus
ENSFCAG00000003499	DDX42	99	71.882	ENSSDUG00000022221	ddx42	99	71.459	Seriola_dumerili
ENSFCAG00000003499	DDX42	99	71.642	ENSSLDG00000018483	ddx42	99	70.896	Seriola_lalandi_dorsalis
ENSFCAG00000003499	DDX42	100	96.791	ENSSARG00000009847	DDX42	100	96.791	Sorex_araneus
ENSFCAG00000003499	DDX42	100	84.864	ENSSPUG00000018806	DDX42	100	84.188	Sphenodon_punctatus
ENSFCAG00000003499	DDX42	90	76.678	ENSSPAG00000013055	ddx42	99	72.505	Stegastes_partitus
ENSFCAG00000003499	DDX42	99	96.671	ENSSSCG00000017289	DDX42	97	96.671	Sus_scrofa
ENSFCAG00000003499	DDX42	100	83.718	ENSTGUG00000001931	DDX42	100	83.987	Taeniopygia_guttata
ENSFCAG00000003499	DDX42	99	69.713	ENSTRUG00000010711	ddx42	99	81.333	Takifugu_rubripes
ENSFCAG00000003499	DDX42	81	93.947	ENSTBEG00000010159	DDX42	99	93.947	Tupaia_belangeri
ENSFCAG00000003499	DDX42	100	98.397	ENSTTRG00000006962	DDX42	100	98.397	Tursiops_truncatus
ENSFCAG00000003499	DDX42	100	98.503	ENSUAMG00000007321	DDX42	100	98.503	Ursus_americanus
ENSFCAG00000003499	DDX42	100	97.647	ENSUMAG00000017438	DDX42	100	97.647	Ursus_maritimus
ENSFCAG00000003499	DDX42	100	88.877	ENSVPAG00000009633	DDX42	100	88.877	Vicugna_pacos
ENSFCAG00000003499	DDX42	100	99.036	ENSVVUG00000006095	DDX42	100	99.036	Vulpes_vulpes
ENSFCAG00000003499	DDX42	100	76.324	ENSXETG00000003245	ddx42	100	74.559	Xenopus_tropicalis
ENSFCAG00000003499	DDX42	99	70.284	ENSXCOG00000017560	ddx42	99	70.516	Xiphophorus_couchianus
ENSFCAG00000003499	DDX42	100	71.535	ENSXMAG00000008138	ddx42	99	71.732	Xiphophorus_maculatus