EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000003572 (Gene tree)
Gene ID: 101092174
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 206745 bases
Position: chrA3:18858390-19065134
Accession: 101092174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000033251	ResIII	PF04851.15	8.8e-08	1	1
ENSFCAP00000003295	ResIII	PF04851.15	9.1e-08	1	1
ENSFCAP00000040313	ResIII	PF04851.15	9.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000003575	CHD6-203	10573	XM_019826498	ENSFCAP00000003295	2717 (aa)	XP_019682057	M3W0K5
ENSFCAT00000050387	CHD6-201	11565	XM_023251244	ENSFCAP00000040313	2717 (aa)	XP_023107012	UPI0003F1A336
ENSFCAT00000038163	CHD6-202	11445	XM_023251248	ENSFCAP00000033251	2677 (aa)	XP_023107016	A0A2I2UL76

Gene Model

Click here to download ENSFCAG00000003572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000003572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000003572	CHD6	79	62.685	ENSFCAG00000022534	CHD9	72	63.976
ENSFCAG00000003572	CHD6	75	67.986	ENSFCAG00000003849	CHD7	71	65.857
ENSFCAG00000003572	CHD6	60	63.168	ENSFCAG00000013859	CHD8	62	63.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000003572	CHD6	100	91.915	ENSG00000124177	CHD6	99	99.660	Homo_sapiens
ENSFCAG00000003572	CHD6	74	75.347	ENSAPOG00000013736	chd6	71	69.160	Acanthochromis_polyacanthus
ENSFCAG00000003572	CHD6	100	95.215	ENSAMEG00000009496	CHD6	100	95.215	Ailuropoda_melanoleuca
ENSFCAG00000003572	CHD6	75	75.495	ENSATEG00000005608	chd6	67	71.341	Anabas_testudineus
ENSFCAG00000003572	CHD6	99	71.934	ENSAPLG00000015592	CHD6	100	72.757	Anas_platyrhynchos
ENSFCAG00000003572	CHD6	91	75.292	ENSACAG00000006842	CHD6	91	76.389	Anolis_carolinensis
ENSFCAG00000003572	CHD6	100	91.547	ENSANAG00000037548	CHD6	99	93.394	Aotus_nancymaae
ENSFCAG00000003572	CHD6	82	69.384	ENSAMXG00000009576	chd6	78	70.121	Astyanax_mexicanus
ENSFCAG00000003572	CHD6	100	89.563	ENSBTAG00000005733	CHD6	100	89.563	Bos_taurus
ENSFCAG00000003572	CHD6	100	91.327	ENSCJAG00000017920	CHD6	99	93.211	Callithrix_jacchus
ENSFCAG00000003572	CHD6	100	95.399	ENSCAFG00000009236	CHD6	100	95.399	Canis_familiaris
ENSFCAG00000003572	CHD6	99	94.678	ENSCAFG00020012906	CHD6	99	98.847	Canis_lupus_dingo
ENSFCAG00000003572	CHD6	100	89.563	ENSCHIG00000017606	CHD6	100	89.563	Capra_hircus
ENSFCAG00000003572	CHD6	84	90.929	ENSTSYG00000014635	CHD6	100	90.929	Carlito_syrichta
ENSFCAG00000003572	CHD6	100	90.482	ENSCPOG00000015641	CHD6	100	90.482	Cavia_porcellus
ENSFCAG00000003572	CHD6	100	91.694	ENSCCAG00000036828	CHD6	99	93.394	Cebus_capucinus
ENSFCAG00000003572	CHD6	100	91.621	ENSCATG00000039248	CHD6	99	93.394	Cercocebus_atys
ENSFCAG00000003572	CHD6	100	90.165	ENSCLAG00000013743	CHD6	100	90.165	Chinchilla_lanigera
ENSFCAG00000003572	CHD6	100	91.878	ENSCSAG00000013997	CHD6	100	91.878	Chlorocebus_sabaeus
ENSFCAG00000003572	CHD6	91	90.053	ENSCHOG00000012647	CHD6	95	90.053	Choloepus_hoffmanni
ENSFCAG00000003572	CHD6	99	73.355	ENSCPBG00000019382	CHD6	99	73.776	Chrysemys_picta_bellii
ENSFCAG00000003572	CHD6	100	91.731	ENSCANG00000043435	CHD6	99	93.394	Colobus_angolensis_palliatus
ENSFCAG00000003572	CHD6	100	88.893	ENSCGRG00001002694	Chd6	100	88.893	Cricetulus_griseus_chok1gshd
ENSFCAG00000003572	CHD6	82	73.887	ENSDARG00000017244	chd6	79	73.887	Danio_rerio
ENSFCAG00000003572	CHD6	99	89.635	ENSDNOG00000004176	CHD6	99	89.635	Dasypus_novemcinctus
ENSFCAG00000003572	CHD6	99	92.836	ENSEASG00005023433	CHD6	95	97.683	Equus_asinus_asinus
ENSFCAG00000003572	CHD6	99	93.633	ENSECAG00000011761	CHD6	100	93.633	Equus_caballus
ENSFCAG00000003572	CHD6	71	80.108	ENSELUG00000012309	chd6	90	80.108	Esox_lucius
ENSFCAG00000003572	CHD6	99	72.757	ENSFALG00000012563	CHD6	98	71.984	Ficedula_albicollis
ENSFCAG00000003572	CHD6	99	90.406	ENSFDAG00000013791	CHD6	99	90.406	Fukomys_damarensis
ENSFCAG00000003572	CHD6	75	69.264	ENSGMOG00000011715	chd6	87	69.407	Gadus_morhua
ENSFCAG00000003572	CHD6	77	71.035	ENSGACG00000000037	chd6	92	64.165	Gasterosteus_aculeatus
ENSFCAG00000003572	CHD6	100	91.915	ENSGGOG00000013123	CHD6	99	93.394	Gorilla_gorilla
ENSFCAG00000003572	CHD6	80	72.278	ENSHBUG00000014701	chd6	68	71.875	Haplochromis_burtoni
ENSFCAG00000003572	CHD6	100	90.522	ENSHGLG00000004548	CHD6	100	90.560	Heterocephalus_glaber_female
ENSFCAG00000003572	CHD6	100	90.515	ENSHGLG00100006401	CHD6	100	90.551	Heterocephalus_glaber_male
ENSFCAG00000003572	CHD6	76	77.306	ENSIPUG00000003692	chd6	74	76.946	Ictalurus_punctatus
ENSFCAG00000003572	CHD6	100	91.394	ENSSTOG00000013382	CHD6	100	91.394	Ictidomys_tridecemlineatus
ENSFCAG00000003572	CHD6	87	76.352	ENSLACG00000010881	CHD6	86	76.410	Latimeria_chalumnae
ENSFCAG00000003572	CHD6	73	80.544	ENSLOCG00000007386	chd6	88	75.816	Lepisosteus_oculatus
ENSFCAG00000003572	CHD6	100	91.029	ENSLAFG00000012144	CHD6	100	91.029	Loxodonta_africana
ENSFCAG00000003572	CHD6	100	91.951	ENSMFAG00000032830	CHD6	99	93.394	Macaca_fascicularis
ENSFCAG00000003572	CHD6	100	91.951	ENSMMUG00000020458	CHD6	99	93.394	Macaca_mulatta
ENSFCAG00000003572	CHD6	100	91.951	ENSMNEG00000040847	CHD6	99	93.394	Macaca_nemestrina
ENSFCAG00000003572	CHD6	100	91.627	ENSMLEG00000031965	CHD6	99	93.394	Mandrillus_leucophaeus
ENSFCAG00000003572	CHD6	74	73.863	ENSMAMG00000013111	chd6	65	73.896	Mastacembelus_armatus
ENSFCAG00000003572	CHD6	99	71.355	ENSMGAG00000001121	CHD6	100	72.092	Meleagris_gallopavo
ENSFCAG00000003572	CHD6	100	91.389	ENSMICG00000016641	CHD6	99	92.661	Microcebus_murinus
ENSFCAG00000003572	CHD6	89	80.834	ENSMODG00000000720	-	99	80.834	Monodelphis_domestica
ENSFCAG00000003572	CHD6	100	87.128	MGP_CAROLIEiJ_G0024604	Chd6	100	94.515	Mus_caroli
ENSFCAG00000003572	CHD6	100	87.422	ENSMUSG00000057133	Chd6	100	94.430	Mus_musculus
ENSFCAG00000003572	CHD6	100	87.201	MGP_PahariEiJ_G0026048	Chd6	100	94.852	Mus_pahari
ENSFCAG00000003572	CHD6	100	87.385	MGP_SPRETEiJ_G0025526	Chd6	100	94.515	Mus_spretus
ENSFCAG00000003572	CHD6	100	93.833	ENSMPUG00000017695	CHD6	100	93.869	Mustela_putorius_furo
ENSFCAG00000003572	CHD6	100	92.019	ENSMLUG00000016247	CHD6	100	92.019	Myotis_lucifugus
ENSFCAG00000003572	CHD6	78	73.368	ENSNBRG00000013839	chd6	79	73.451	Neolamprologus_brichardi
ENSFCAG00000003572	CHD6	100	89.974	ENSNLEG00000006496	CHD6	100	90.048	Nomascus_leucogenys
ENSFCAG00000003572	CHD6	100	87.164	ENSOPRG00000013376	-	100	87.164	Ochotona_princeps
ENSFCAG00000003572	CHD6	82	74.793	ENSONIG00000000393	chd6	86	74.793	Oreochromis_niloticus
ENSFCAG00000003572	CHD6	100	70.702	ENSOANG00000014347	CHD6	99	71.157	Ornithorhynchus_anatinus
ENSFCAG00000003572	CHD6	99	89.474	ENSOCUG00000012394	CHD6	100	89.474	Oryctolagus_cuniculus
ENSFCAG00000003572	CHD6	79	70.135	ENSORLG00020021891	chd6	95	86.172	Oryzias_latipes_hni
ENSFCAG00000003572	CHD6	99	90.159	ENSOGAG00000002427	CHD6	99	90.096	Otolemur_garnettii
ENSFCAG00000003572	CHD6	99	87.164	ENSOARG00000002597	CHD6	100	87.164	Ovis_aries
ENSFCAG00000003572	CHD6	100	99.595	ENSPPRG00000014756	CHD6	100	99.595	Panthera_pardus
ENSFCAG00000003572	CHD6	100	99.411	ENSPTIG00000011094	CHD6	100	99.411	Panthera_tigris_altaica
ENSFCAG00000003572	CHD6	100	91.988	ENSPTRG00000013504	CHD6	99	93.394	Pan_troglodytes
ENSFCAG00000003572	CHD6	100	91.951	ENSPANG00000025554	CHD6	99	93.211	Papio_anubis
ENSFCAG00000003572	CHD6	77	76.867	ENSPKIG00000005578	chd6	79	72.898	Paramormyrops_kingsleyae
ENSFCAG00000003572	CHD6	75	76.491	ENSPMGG00000014877	chd6	84	75.309	Periophthalmus_magnuspinnatus
ENSFCAG00000003572	CHD6	100	80.194	ENSPCIG00000028037	CHD6	100	80.580	Phascolarctos_cinereus
ENSFCAG00000003572	CHD6	79	69.808	ENSPLAG00000003128	chd6	66	73.438	Poecilia_latipinna
ENSFCAG00000003572	CHD6	70	72.996	ENSPREG00000022653	chd6	99	86.630	Poecilia_reticulata
ENSFCAG00000003572	CHD6	100	91.991	ENSPPYG00000011016	CHD6	100	91.991	Pongo_abelii
ENSFCAG00000003572	CHD6	99	91.568	ENSPCOG00000001089	CHD6	99	93.211	Propithecus_coquereli
ENSFCAG00000003572	CHD6	78	75.016	ENSPNYG00000022516	chd6	78	74.789	Pundamilia_nyererei
ENSFCAG00000003572	CHD6	81	70.901	ENSPNAG00000012825	chd6	79	71.360	Pygocentrus_nattereri
ENSFCAG00000003572	CHD6	100	86.539	ENSRNOG00000016744	Chd6	100	86.502	Rattus_norvegicus
ENSFCAG00000003572	CHD6	100	91.657	ENSSBOG00000022089	CHD6	99	93.394	Saimiri_boliviensis_boliviensis
ENSFCAG00000003572	CHD6	99	79.721	ENSSHAG00000017072	CHD6	99	80.125	Sarcophilus_harrisii
ENSFCAG00000003572	CHD6	78	75.992	ENSSFOG00015012920	chd6	81	72.678	Scleropages_formosus
ENSFCAG00000003572	CHD6	59	100.000	ENSSARG00000002615	-	61	100.000	Sorex_araneus
ENSFCAG00000003572	CHD6	100	92.093	ENSSSCG00000007360	CHD6	100	92.789	Sus_scrofa
ENSFCAG00000003572	CHD6	97	73.762	ENSTGUG00000003179	CHD6	99	73.834	Taeniopygia_guttata
ENSFCAG00000003572	CHD6	74	77.373	ENSTNIG00000017487	chd6	82	77.373	Tetraodon_nigroviridis
ENSFCAG00000003572	CHD6	100	89.085	ENSTTRG00000013438	CHD6	100	89.085	Tursiops_truncatus
ENSFCAG00000003572	CHD6	100	93.046	ENSUAMG00000024036	CHD6	99	94.018	Ursus_americanus
ENSFCAG00000003572	CHD6	99	95.416	ENSUMAG00000002017	CHD6	99	95.419	Ursus_maritimus
ENSFCAG00000003572	CHD6	95	90.486	ENSVPAG00000007941	CHD6	96	90.486	Vicugna_pacos
ENSFCAG00000003572	CHD6	100	95.436	ENSVVUG00000029164	CHD6	100	95.436	Vulpes_vulpes
ENSFCAG00000003572	CHD6	99	61.008	ENSXETG00000021445	chd6	99	60.830	Xenopus_tropicalis