EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000003958 (Gene tree)
Gene ID: 101083588
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 94069 bases
Position: chrB1:129165220-129259288
Accession: 101083588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000042617	ResIII	PF04851.15	1.1e-10	1	1
ENSFCAP00000027764	ResIII	PF04851.15	1.4e-10	1	1
ENSFCAP00000003651	ResIII	PF04851.15	1.5e-10	1	1
ENSFCAP00000046245	ResIII	PF04851.15	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000003960	SMARCAD1-202	4942	XM_019829237	ENSFCAP00000003651	1027 (aa)	XP_019684796	M3W1A3
ENSFCAT00000065910	SMARCAD1-203	5046	XM_006930958	ENSFCAP00000046245	1028 (aa)	XP_006931020	UPI0005ABE806
ENSFCAT00000048141	SMARCAD1-201	3603	-	ENSFCAP00000027764	1023 (aa)	-	A0A2I2U5S0
ENSFCAT00000062903	SMARCAD1-204	3878	XM_019829238	ENSFCAP00000042617	596 (aa)	XP_019684797	UPI0009055F0C

Gene Model

Click here to download ENSFCAG00000003958's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000003958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000003958	SMARCAD1	85	31.203	ENSFCAG00000015513	-	68	31.579
ENSFCAG00000003958	SMARCAD1	87	35.878	ENSFCAG00000007777	CHD1L	51	35.878
ENSFCAG00000003958	SMARCAD1	87	37.843	ENSFCAG00000005206	HELLS	77	37.843

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSG00000163104	SMARCAD1	100	98.993	Homo_sapiens
ENSFCAG00000003958	SMARCAD1	99	67.677	ENSAPOG00000011446	smarcad1a	97	61.970	Acanthochromis_polyacanthus
ENSFCAG00000003958	SMARCAD1	100	99.664	ENSAMEG00000005844	SMARCAD1	100	98.541	Ailuropoda_melanoleuca
ENSFCAG00000003958	SMARCAD1	97	67.530	ENSACIG00000018326	smarcad1a	100	68.587	Amphilophus_citrinellus
ENSFCAG00000003958	SMARCAD1	99	67.677	ENSAOCG00000019762	smarcad1a	98	63.068	Amphiprion_ocellaris
ENSFCAG00000003958	SMARCAD1	99	67.845	ENSAPEG00000003889	smarcad1a	96	63.210	Amphiprion_percula
ENSFCAG00000003958	SMARCAD1	97	68.977	ENSATEG00000015608	smarcad1a	93	62.921	Anabas_testudineus
ENSFCAG00000003958	SMARCAD1	100	84.757	ENSAPLG00000004630	SMARCAD1	100	72.503	Anas_platyrhynchos
ENSFCAG00000003958	SMARCAD1	100	83.417	ENSACAG00000013554	SMARCAD1	100	70.145	Anolis_carolinensis
ENSFCAG00000003958	SMARCAD1	100	98.490	ENSANAG00000020488	SMARCAD1	99	97.456	Aotus_nancymaae
ENSFCAG00000003958	SMARCAD1	100	67.114	ENSACLG00000017063	smarcad1a	99	61.172	Astatotilapia_calliptera
ENSFCAG00000003958	SMARCAD1	100	65.604	ENSAMXG00000015470	smarcad1a	98	61.236	Astyanax_mexicanus
ENSFCAG00000003958	SMARCAD1	100	67.953	ENSAMXG00000019130	smarcad1b	85	60.025	Astyanax_mexicanus
ENSFCAG00000003958	SMARCAD1	100	98.328	ENSBTAG00000017061	SMARCAD1	100	96.793	Bos_taurus
ENSFCAG00000003958	SMARCAD1	96	44.597	WBGene00010845	M03C11.8	63	42.702	Caenorhabditis_elegans
ENSFCAG00000003958	SMARCAD1	100	98.826	ENSCJAG00000006778	SMARCAD1	100	96.592	Callithrix_jacchus
ENSFCAG00000003958	SMARCAD1	100	99.161	ENSCAFG00000010026	SMARCAD1	100	98.054	Canis_familiaris
ENSFCAG00000003958	SMARCAD1	100	99.161	ENSCAFG00020003994	SMARCAD1	100	98.652	Canis_lupus_dingo
ENSFCAG00000003958	SMARCAD1	100	98.826	ENSCHIG00000012905	SMARCAD1	100	96.984	Capra_hircus
ENSFCAG00000003958	SMARCAD1	100	98.490	ENSTSYG00000002706	SMARCAD1	100	96.592	Carlito_syrichta
ENSFCAG00000003958	SMARCAD1	97	87.175	ENSCAPG00000016744	SMARCAD1	96	78.280	Cavia_aperea
ENSFCAG00000003958	SMARCAD1	100	97.651	ENSCPOG00000011398	SMARCAD1	100	93.320	Cavia_porcellus
ENSFCAG00000003958	SMARCAD1	100	98.658	ENSCCAG00000022264	SMARCAD1	100	98.658	Cebus_capucinus
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSCATG00000035663	SMARCAD1	99	97.860	Cercocebus_atys
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSCSAG00000004186	SMARCAD1	100	98.214	Chlorocebus_sabaeus
ENSFCAG00000003958	SMARCAD1	100	85.762	ENSCPBG00000013203	SMARCAD1	100	73.896	Chrysemys_picta_bellii
ENSFCAG00000003958	SMARCAD1	100	50.249	ENSCING00000001688	-	99	49.775	Ciona_intestinalis
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSCANG00000003556	SMARCAD1	100	98.993	Colobus_angolensis_palliatus
ENSFCAG00000003958	SMARCAD1	100	96.980	ENSCGRG00001015056	Smarcad1	100	92.113	Cricetulus_griseus_chok1gshd
ENSFCAG00000003958	SMARCAD1	100	96.980	ENSCGRG00000014087	Smarcad1	100	92.113	Cricetulus_griseus_crigri
ENSFCAG00000003958	SMARCAD1	100	65.772	ENSCSEG00000017903	smarcad1a	100	47.405	Cynoglossus_semilaevis
ENSFCAG00000003958	SMARCAD1	100	65.268	ENSCSEG00000014419	-	94	57.636	Cynoglossus_semilaevis
ENSFCAG00000003958	SMARCAD1	100	66.611	ENSDARG00000073721	smarcad1b	82	59.391	Danio_rerio
ENSFCAG00000003958	SMARCAD1	99	65.825	ENSDARG00000014041	smarcad1a	92	55.727	Danio_rerio
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSDNOG00000000806	-	100	96.592	Dasypus_novemcinctus
ENSFCAG00000003958	SMARCAD1	100	97.483	ENSDORG00000012331	Smarcad1	100	92.233	Dipodomys_ordii
ENSFCAG00000003958	SMARCAD1	99	46.566	FBgn0032157	Etl1	86	42.993	Drosophila_melanogaster
ENSFCAG00000003958	SMARCAD1	95	48.517	ENSEBUG00000003969	smarcad1a	96	46.353	Eptatretus_burgeri
ENSFCAG00000003958	SMARCAD1	100	99.497	ENSEASG00005012382	SMARCAD1	100	97.860	Equus_asinus_asinus
ENSFCAG00000003958	SMARCAD1	100	99.497	ENSECAG00000011562	SMARCAD1	100	97.860	Equus_caballus
ENSFCAG00000003958	SMARCAD1	99	67.340	ENSELUG00000018535	smarcad1a	100	50.975	Esox_lucius
ENSFCAG00000003958	SMARCAD1	98	65.983	ENSELUG00000019154	smarcad1b	79	59.079	Esox_lucius
ENSFCAG00000003958	SMARCAD1	100	84.087	ENSFALG00000006089	SMARCAD1	100	67.243	Ficedula_albicollis
ENSFCAG00000003958	SMARCAD1	100	97.819	ENSFDAG00000017027	SMARCAD1	100	94.450	Fukomys_damarensis
ENSFCAG00000003958	SMARCAD1	99	67.677	ENSFHEG00000012778	smarcad1a	87	62.674	Fundulus_heteroclitus
ENSFCAG00000003958	SMARCAD1	100	66.499	ENSGMOG00000018995	smarcad1a	97	57.488	Gadus_morhua
ENSFCAG00000003958	SMARCAD1	100	79.564	ENSGALG00000037339	SMARCAD1	94	73.946	Gallus_gallus
ENSFCAG00000003958	SMARCAD1	99	67.003	ENSGAFG00000013498	smarcad1a	60	66.825	Gambusia_affinis
ENSFCAG00000003958	SMARCAD1	99	66.891	ENSGACG00000007327	smarcad1a	99	58.617	Gasterosteus_aculeatus
ENSFCAG00000003958	SMARCAD1	100	85.595	ENSGAGG00000008582	SMARCAD1	100	73.674	Gopherus_agassizii
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSGGOG00000023001	SMARCAD1	100	96.981	Gorilla_gorilla
ENSFCAG00000003958	SMARCAD1	100	66.946	ENSHBUG00000011042	smarcad1a	99	61.035	Haplochromis_burtoni
ENSFCAG00000003958	SMARCAD1	100	97.819	ENSHGLG00000005070	SMARCAD1	100	94.466	Heterocephalus_glaber_female
ENSFCAG00000003958	SMARCAD1	100	97.819	ENSHGLG00100006812	SMARCAD1	100	94.466	Heterocephalus_glaber_male
ENSFCAG00000003958	SMARCAD1	100	64.933	ENSHCOG00000007848	smarcad1a	98	59.722	Hippocampus_comes
ENSFCAG00000003958	SMARCAD1	99	66.162	ENSIPUG00000000242	smarcad1a	95	52.868	Ictalurus_punctatus
ENSFCAG00000003958	SMARCAD1	100	66.779	ENSIPUG00000022817	smarcad1b	89	57.126	Ictalurus_punctatus
ENSFCAG00000003958	SMARCAD1	100	98.658	ENSSTOG00000001227	SMARCAD1	100	96.206	Ictidomys_tridecemlineatus
ENSFCAG00000003958	SMARCAD1	100	97.819	ENSJJAG00000022342	Smarcad1	100	94.450	Jaculus_jaculus
ENSFCAG00000003958	SMARCAD1	98	67.526	ENSKMAG00000021351	smarcad1a	66	61.250	Kryptolebias_marmoratus
ENSFCAG00000003958	SMARCAD1	99	68.013	ENSLBEG00000008088	smarcad1a	63	65.970	Labrus_bergylta
ENSFCAG00000003958	SMARCAD1	100	71.141	ENSLOCG00000012909	smarcad1a	100	55.651	Lepisosteus_oculatus
ENSFCAG00000003958	SMARCAD1	100	95.805	ENSLAFG00000000040	SMARCAD1	100	94.547	Loxodonta_africana
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSMFAG00000042606	SMARCAD1	100	97.753	Macaca_fascicularis
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSMMUG00000022242	SMARCAD1	100	97.753	Macaca_mulatta
ENSFCAG00000003958	SMARCAD1	100	98.826	ENSMNEG00000038117	SMARCAD1	100	98.826	Macaca_nemestrina
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSMLEG00000038333	SMARCAD1	100	98.993	Mandrillus_leucophaeus
ENSFCAG00000003958	SMARCAD1	99	68.687	ENSMAMG00000000933	smarcad1a	68	63.523	Mastacembelus_armatus
ENSFCAG00000003958	SMARCAD1	100	67.114	ENSMZEG00005005203	smarcad1a	100	49.634	Maylandia_zebra
ENSFCAG00000003958	SMARCAD1	100	80.769	ENSMGAG00000005577	SMARCAD1	100	64.543	Meleagris_gallopavo
ENSFCAG00000003958	SMARCAD1	100	97.148	ENSMAUG00000008417	Smarcad1	100	92.016	Mesocricetus_auratus
ENSFCAG00000003958	SMARCAD1	100	97.826	ENSMICG00000009746	SMARCAD1	100	95.335	Microcebus_murinus
ENSFCAG00000003958	SMARCAD1	100	96.812	ENSMOCG00000017142	Smarcad1	100	91.723	Microtus_ochrogaster
ENSFCAG00000003958	SMARCAD1	100	67.785	ENSMMOG00000000275	smarcad1a	92	64.978	Mola_mola
ENSFCAG00000003958	SMARCAD1	100	90.940	ENSMODG00000019268	SMARCAD1	100	81.774	Monodelphis_domestica
ENSFCAG00000003958	SMARCAD1	100	96.477	MGP_CAROLIEiJ_G0028458	-	77	93.625	Mus_caroli
ENSFCAG00000003958	SMARCAD1	100	96.477	ENSMUSG00000029920	Smarcad1	100	91.342	Mus_musculus
ENSFCAG00000003958	SMARCAD1	100	96.644	MGP_PahariEiJ_G0022198	Smarcad1	100	91.440	Mus_pahari
ENSFCAG00000003958	SMARCAD1	100	96.477	MGP_SPRETEiJ_G0029462	Smarcad1	100	91.440	Mus_spretus
ENSFCAG00000003958	SMARCAD1	100	99.497	ENSMPUG00000002111	SMARCAD1	100	98.541	Mustela_putorius_furo
ENSFCAG00000003958	SMARCAD1	100	97.157	ENSMLUG00000000425	SMARCAD1	100	93.392	Myotis_lucifugus
ENSFCAG00000003958	SMARCAD1	100	97.651	ENSNGAG00000000810	Smarcad1	100	93.281	Nannospalax_galili
ENSFCAG00000003958	SMARCAD1	97	67.358	ENSNBRG00000012749	smarcad1a	85	61.236	Neolamprologus_brichardi
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSNLEG00000014225	SMARCAD1	100	98.993	Nomascus_leucogenys
ENSFCAG00000003958	SMARCAD1	100	97.651	ENSODEG00000004334	SMARCAD1	100	93.204	Octodon_degus
ENSFCAG00000003958	SMARCAD1	100	66.611	ENSONIG00000015059	smarcad1a	100	51.688	Oreochromis_niloticus
ENSFCAG00000003958	SMARCAD1	100	90.134	ENSOANG00000013764	SMARCAD1	100	84.903	Ornithorhynchus_anatinus
ENSFCAG00000003958	SMARCAD1	100	98.322	ENSOCUG00000017283	SMARCAD1	100	95.910	Oryctolagus_cuniculus
ENSFCAG00000003958	SMARCAD1	99	66.835	ENSORLG00000004869	smarcad1a	68	61.326	Oryzias_latipes
ENSFCAG00000003958	SMARCAD1	99	66.835	ENSORLG00020020569	smarcad1a	68	61.295	Oryzias_latipes_hni
ENSFCAG00000003958	SMARCAD1	99	66.667	ENSORLG00015009045	smarcad1a	68	61.411	Oryzias_latipes_hsok
ENSFCAG00000003958	SMARCAD1	100	66.443	ENSOMEG00000023032	smarcad1a	68	61.073	Oryzias_melastigma
ENSFCAG00000003958	SMARCAD1	100	96.656	ENSOGAG00000011444	SMARCAD1	100	94.849	Otolemur_garnettii
ENSFCAG00000003958	SMARCAD1	100	98.826	ENSOARG00000017851	SMARCAD1	100	96.887	Ovis_aries
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSPPAG00000035715	SMARCAD1	100	97.079	Pan_paniscus
ENSFCAG00000003958	SMARCAD1	100	100.000	ENSPPRG00000024756	SMARCAD1	100	100.000	Panthera_pardus
ENSFCAG00000003958	SMARCAD1	100	99.708	ENSPTIG00000017868	SMARCAD1	100	99.708	Panthera_tigris_altaica
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSPTRG00000023126	SMARCAD1	100	98.993	Pan_troglodytes
ENSFCAG00000003958	SMARCAD1	100	96.995	ENSPANG00000019757	SMARCAD1	100	95.534	Papio_anubis
ENSFCAG00000003958	SMARCAD1	100	84.757	ENSPSIG00000010255	SMARCAD1	100	72.919	Pelodiscus_sinensis
ENSFCAG00000003958	SMARCAD1	99	65.378	ENSPMGG00000010735	smarcad1a	95	63.166	Periophthalmus_magnuspinnatus
ENSFCAG00000003958	SMARCAD1	100	82.886	ENSPEMG00000001854	Smarcad1	100	77.897	Peromyscus_maniculatus_bairdii
ENSFCAG00000003958	SMARCAD1	99	60.033	ENSPMAG00000003516	smarcad1a	99	47.283	Petromyzon_marinus
ENSFCAG00000003958	SMARCAD1	100	90.940	ENSPCIG00000008137	SMARCAD1	98	89.026	Phascolarctos_cinereus
ENSFCAG00000003958	SMARCAD1	99	67.172	ENSPFOG00000019116	smarcad1a	65	62.483	Poecilia_formosa
ENSFCAG00000003958	SMARCAD1	99	67.003	ENSPLAG00000000108	smarcad1a	64	62.343	Poecilia_latipinna
ENSFCAG00000003958	SMARCAD1	99	67.172	ENSPMEG00000009155	smarcad1a	65	62.483	Poecilia_mexicana
ENSFCAG00000003958	SMARCAD1	99	67.677	ENSPREG00000018185	smarcad1a	94	62.865	Poecilia_reticulata
ENSFCAG00000003958	SMARCAD1	100	97.993	ENSPPYG00000014935	SMARCAD1	100	96.113	Pongo_abelii
ENSFCAG00000003958	SMARCAD1	81	97.917	ENSPCOG00000020478	SMARCAD1	89	96.748	Propithecus_coquereli
ENSFCAG00000003958	SMARCAD1	100	96.656	ENSPVAG00000001760	SMARCAD1	100	95.627	Pteropus_vampyrus
ENSFCAG00000003958	SMARCAD1	97	67.128	ENSPNYG00000010087	smarcad1a	86	60.809	Pundamilia_nyererei
ENSFCAG00000003958	SMARCAD1	100	68.121	ENSPNAG00000010099	smarcad1b	84	60.000	Pygocentrus_nattereri
ENSFCAG00000003958	SMARCAD1	99	67.003	ENSPNAG00000001663	smarcad1a	90	54.645	Pygocentrus_nattereri
ENSFCAG00000003958	SMARCAD1	100	96.812	ENSRNOG00000006391	Smarcad1	100	92.315	Rattus_norvegicus
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSRBIG00000041989	SMARCAD1	100	96.592	Rhinopithecus_bieti
ENSFCAG00000003958	SMARCAD1	100	98.993	ENSRROG00000035309	SMARCAD1	100	96.592	Rhinopithecus_roxellana
ENSFCAG00000003958	SMARCAD1	100	98.658	ENSSBOG00000032114	SMARCAD1	100	98.658	Saimiri_boliviensis_boliviensis
ENSFCAG00000003958	SMARCAD1	100	91.443	ENSSHAG00000001279	SMARCAD1	100	82.932	Sarcophilus_harrisii
ENSFCAG00000003958	SMARCAD1	99	64.538	ENSSFOG00015020909	smarcad1a	100	57.439	Scleropages_formosus
ENSFCAG00000003958	SMARCAD1	99	68.013	ENSSFOG00015016814	smarcad1b	100	50.416	Scleropages_formosus
ENSFCAG00000003958	SMARCAD1	99	67.845	ENSSMAG00000001326	smarcad1a	66	63.092	Scophthalmus_maximus
ENSFCAG00000003958	SMARCAD1	99	67.340	ENSSDUG00000022338	smarcad1a	83	62.926	Seriola_dumerili
ENSFCAG00000003958	SMARCAD1	99	67.003	ENSSLDG00000024986	smarcad1a	60	66.459	Seriola_lalandi_dorsalis
ENSFCAG00000003958	SMARCAD1	100	84.757	ENSSPUG00000004633	SMARCAD1	100	84.757	Sphenodon_punctatus
ENSFCAG00000003958	SMARCAD1	99	67.845	ENSSPAG00000001970	smarcad1a	95	63.702	Stegastes_partitus
ENSFCAG00000003958	SMARCAD1	100	99.497	ENSSSCG00000009193	SMARCAD1	100	99.168	Sus_scrofa
ENSFCAG00000003958	SMARCAD1	100	85.260	ENSTGUG00000003127	SMARCAD1	100	78.316	Taeniopygia_guttata
ENSFCAG00000003958	SMARCAD1	99	68.403	ENSTNIG00000017585	smarcad1a	99	57.350	Tetraodon_nigroviridis
ENSFCAG00000003958	SMARCAD1	91	97.817	ENSTBEG00000002789	SMARCAD1	91	97.817	Tupaia_belangeri
ENSFCAG00000003958	SMARCAD1	100	99.330	ENSTTRG00000000226	SMARCAD1	100	96.624	Tursiops_truncatus
ENSFCAG00000003958	SMARCAD1	100	99.832	ENSUAMG00000022262	SMARCAD1	99	99.458	Ursus_americanus
ENSFCAG00000003958	SMARCAD1	100	99.832	ENSUMAG00000004549	SMARCAD1	100	98.637	Ursus_maritimus
ENSFCAG00000003958	SMARCAD1	100	99.161	ENSVVUG00000007271	SMARCAD1	100	98.930	Vulpes_vulpes
ENSFCAG00000003958	SMARCAD1	100	73.746	ENSXETG00000019214	smarcad1	100	66.098	Xenopus_tropicalis
ENSFCAG00000003958	SMARCAD1	99	66.047	ENSXCOG00000005232	smarcad1a	94	53.927	Xiphophorus_couchianus
ENSFCAG00000003958	SMARCAD1	99	66.835	ENSXMAG00000015350	smarcad1a	89	62.011	Xiphophorus_maculatus