EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000004510 (Gene tree)
Gene ID: 101090770
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 17070 bases
Position: chrB2:32760142-32777211
Accession: 101090770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000004164	tRNA-synt_1g	PF09334.11	9.9e-11	1	1
ENSFCAP00000041004	tRNA-synt_1g	PF09334.11	9.9e-11	1	1
ENSFCAP00000004164	Anticodon_1	PF08264.13	6.4e-33	1	1
ENSFCAP00000041004	Anticodon_1	PF08264.13	6.4e-33	1	1
ENSFCAP00000004164	tRNA-synt_1	PF00133.22	1.3e-201	1	1
ENSFCAP00000041004	tRNA-synt_1	PF00133.22	1.3e-201	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000065098	VARS-202	4056	XM_003985941	ENSFCAP00000041004	1264 (aa)	XP_003985990	UPI0002990C76
ENSFCAT00000004511	VARS-201	5504	-	ENSFCAP00000004164	1264 (aa)	-	M3W2B4

Gene Model

Click here to download ENSFCAG00000004510's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000004510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000004510	VARS	81	50.435	ENSFCAG00000010531	VARS2	92	51.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000004510	VARS	100	94.937	ENSG00000204394	VARS	100	97.701	Homo_sapiens
ENSFCAG00000004510	VARS	98	65.060	ENSAPOG00000020691	vars	99	64.739	Acanthochromis_polyacanthus
ENSFCAG00000004510	VARS	98	65.060	ENSAPOG00000020921	vars	99	64.739	Acanthochromis_polyacanthus
ENSFCAG00000004510	VARS	100	96.759	ENSAMEG00000006417	VARS	100	96.759	Ailuropoda_melanoleuca
ENSFCAG00000004510	VARS	100	65.725	ENSACIG00000013752	vars	100	65.566	Amphilophus_citrinellus
ENSFCAG00000004510	VARS	100	64.934	ENSAOCG00000002447	vars	100	64.516	Amphiprion_ocellaris
ENSFCAG00000004510	VARS	100	64.779	ENSAPEG00000010638	vars	99	64.875	Amphiprion_percula
ENSFCAG00000004510	VARS	100	63.843	ENSATEG00000020219	vars	100	64.618	Anabas_testudineus
ENSFCAG00000004510	VARS	90	70.598	ENSACAG00000029133	-	99	70.425	Anolis_carolinensis
ENSFCAG00000004510	VARS	100	94.778	ENSANAG00000015453	VARS	100	94.778	Aotus_nancymaae
ENSFCAG00000004510	VARS	100	64.961	ENSACLG00000025699	vars	97	64.802	Astatotilapia_calliptera
ENSFCAG00000004510	VARS	94	66.555	ENSAMXG00000017716	vars	95	66.555	Astyanax_mexicanus
ENSFCAG00000004510	VARS	100	95.886	ENSBTAG00000005631	VARS	100	95.886	Bos_taurus
ENSFCAG00000004510	VARS	100	94.699	ENSCJAG00000002604	VARS	100	94.699	Callithrix_jacchus
ENSFCAG00000004510	VARS	100	95.570	ENSCAFG00000000636	VARS	100	95.570	Canis_familiaris
ENSFCAG00000004510	VARS	94	96.030	ENSCAFG00020020790	VARS	98	94.394	Canis_lupus_dingo
ENSFCAG00000004510	VARS	100	95.965	ENSCHIG00000011008	VARS	100	95.965	Capra_hircus
ENSFCAG00000004510	VARS	100	94.778	ENSTSYG00000001567	VARS	100	94.778	Carlito_syrichta
ENSFCAG00000004510	VARS	91	90.311	ENSCAPG00000013736	VARS	99	90.311	Cavia_aperea
ENSFCAG00000004510	VARS	100	91.377	ENSCPOG00000000870	VARS	100	91.377	Cavia_porcellus
ENSFCAG00000004510	VARS	100	94.858	ENSCCAG00000035656	VARS	100	94.858	Cebus_capucinus
ENSFCAG00000004510	VARS	100	94.699	ENSCATG00000022394	VARS	100	94.699	Cercocebus_atys
ENSFCAG00000004510	VARS	88	89.239	ENSCLAG00000009470	VARS	92	89.239	Chinchilla_lanigera
ENSFCAG00000004510	VARS	100	94.778	ENSCSAG00000008784	VARS	100	94.778	Chlorocebus_sabaeus
ENSFCAG00000004510	VARS	78	73.931	ENSCPBG00000007943	VARS	96	74.435	Chrysemys_picta_bellii
ENSFCAG00000004510	VARS	100	94.699	ENSCANG00000033570	VARS	100	94.699	Colobus_angolensis_palliatus
ENSFCAG00000004510	VARS	100	92.563	ENSCGRG00001005686	Vars	100	92.563	Cricetulus_griseus_chok1gshd
ENSFCAG00000004510	VARS	92	87.521	ENSCGRG00000013352	Vars	78	87.521	Cricetulus_griseus_crigri
ENSFCAG00000004510	VARS	100	64.185	ENSCSEG00000019652	vars	100	64.185	Cynoglossus_semilaevis
ENSFCAG00000004510	VARS	100	65.657	ENSCVAG00000022398	vars	100	65.501	Cyprinodon_variegatus
ENSFCAG00000004510	VARS	100	64.469	ENSDARG00000044575	vars	100	64.463	Danio_rerio
ENSFCAG00000004510	VARS	84	92.286	ENSDORG00000016433	Vars	95	92.286	Dipodomys_ordii
ENSFCAG00000004510	VARS	69	86.799	ENSETEG00000003824	VARS	77	86.799	Echinops_telfairi
ENSFCAG00000004510	VARS	57	61.813	ENSEBUG00000004637	vars	100	62.088	Eptatretus_burgeri
ENSFCAG00000004510	VARS	50	70.471	ENSEBUG00000007086	vars	84	69.459	Eptatretus_burgeri
ENSFCAG00000004510	VARS	100	96.677	ENSEASG00005015673	VARS	100	96.677	Equus_asinus_asinus
ENSFCAG00000004510	VARS	100	96.443	ENSECAG00000014620	VARS	100	96.443	Equus_caballus
ENSFCAG00000004510	VARS	83	89.965	ENSEEUG00000004116	VARS	83	89.965	Erinaceus_europaeus
ENSFCAG00000004510	VARS	100	63.917	ENSELUG00000006550	vars	97	64.148	Esox_lucius
ENSFCAG00000004510	VARS	82	91.856	ENSFDAG00000011401	VARS	100	91.856	Fukomys_damarensis
ENSFCAG00000004510	VARS	100	65.346	ENSFHEG00000010672	vars	100	65.268	Fundulus_heteroclitus
ENSFCAG00000004510	VARS	92	66.140	ENSGMOG00000014908	vars	97	66.140	Gadus_morhua
ENSFCAG00000004510	VARS	100	65.759	ENSGAFG00000021630	vars	100	65.603	Gambusia_affinis
ENSFCAG00000004510	VARS	92	66.416	ENSGACG00000009601	vars	98	66.083	Gasterosteus_aculeatus
ENSFCAG00000004510	VARS	50	65.245	ENSGAGG00000006508	-	91	64.297	Gopherus_agassizii
ENSFCAG00000004510	VARS	100	94.937	ENSGGOG00000011364	VARS	100	94.937	Gorilla_gorilla
ENSFCAG00000004510	VARS	100	64.961	ENSHBUG00000017151	vars	97	64.802	Haplochromis_burtoni
ENSFCAG00000004510	VARS	100	90.348	ENSHGLG00000011646	VARS	100	90.190	Heterocephalus_glaber_female
ENSFCAG00000004510	VARS	93	83.140	ENSHGLG00100018062	VARS	100	83.140	Heterocephalus_glaber_male
ENSFCAG00000004510	VARS	99	64.341	ENSHCOG00000012198	vars	99	64.358	Hippocampus_comes
ENSFCAG00000004510	VARS	100	65.525	ENSIPUG00000005218	vars	100	65.525	Ictalurus_punctatus
ENSFCAG00000004510	VARS	100	94.071	ENSSTOG00000013112	VARS	100	94.071	Ictidomys_tridecemlineatus
ENSFCAG00000004510	VARS	100	72.073	ENSJJAG00000015343	-	99	73.333	Jaculus_jaculus
ENSFCAG00000004510	VARS	100	91.297	ENSJJAG00000019749	-	100	90.744	Jaculus_jaculus
ENSFCAG00000004510	VARS	100	65.324	ENSKMAG00000009455	vars	100	65.166	Kryptolebias_marmoratus
ENSFCAG00000004510	VARS	100	63.801	ENSLBEG00000010341	vars	100	63.887	Labrus_bergylta
ENSFCAG00000004510	VARS	94	61.709	ENSLACG00000015232	VARS	99	62.049	Latimeria_chalumnae
ENSFCAG00000004510	VARS	100	66.484	ENSLOCG00000004240	vars	100	66.406	Lepisosteus_oculatus
ENSFCAG00000004510	VARS	100	93.750	ENSLAFG00000023090	VARS	100	93.434	Loxodonta_africana
ENSFCAG00000004510	VARS	100	94.778	ENSMFAG00000001032	VARS	100	94.778	Macaca_fascicularis
ENSFCAG00000004510	VARS	100	94.778	ENSMMUG00000006828	VARS	100	94.778	Macaca_mulatta
ENSFCAG00000004510	VARS	100	94.778	ENSMNEG00000042072	VARS	100	94.778	Macaca_nemestrina
ENSFCAG00000004510	VARS	100	94.699	ENSMLEG00000039307	VARS	100	94.699	Mandrillus_leucophaeus
ENSFCAG00000004510	VARS	100	64.771	ENSMAMG00000003949	vars	100	64.875	Mastacembelus_armatus
ENSFCAG00000004510	VARS	100	64.961	ENSMZEG00005018327	vars	100	64.720	Maylandia_zebra
ENSFCAG00000004510	VARS	100	92.247	ENSMAUG00000006715	Vars	100	92.247	Mesocricetus_auratus
ENSFCAG00000004510	VARS	100	93.829	ENSMICG00000003548	VARS	100	93.829	Microcebus_murinus
ENSFCAG00000004510	VARS	100	89.557	ENSMOCG00000015404	Vars	100	89.399	Microtus_ochrogaster
ENSFCAG00000004510	VARS	100	64.387	ENSMMOG00000015801	vars	100	64.308	Mola_mola
ENSFCAG00000004510	VARS	100	86.472	ENSMODG00000015204	-	100	86.472	Monodelphis_domestica
ENSFCAG00000004510	VARS	99	64.679	ENSMALG00000022532	vars	99	64.595	Monopterus_albus
ENSFCAG00000004510	VARS	100	93.196	MGP_CAROLIEiJ_G0021491	Vars	100	92.880	Mus_caroli
ENSFCAG00000004510	VARS	100	93.038	ENSMUSG00000007029	Vars	100	92.722	Mus_musculus
ENSFCAG00000004510	VARS	100	92.247	MGP_PahariEiJ_G0020486	Vars	100	92.009	Mus_pahari
ENSFCAG00000004510	VARS	100	93.117	MGP_SPRETEiJ_G0022396	Vars	100	92.801	Mus_spretus
ENSFCAG00000004510	VARS	100	96.440	ENSMPUG00000010821	VARS	100	96.440	Mustela_putorius_furo
ENSFCAG00000004510	VARS	78	93.725	ENSMLUG00000013126	VARS	100	94.231	Myotis_lucifugus
ENSFCAG00000004510	VARS	100	92.089	ENSNGAG00000012151	Vars	100	92.563	Nannospalax_galili
ENSFCAG00000004510	VARS	100	64.884	ENSNBRG00000020520	vars	100	64.724	Neolamprologus_brichardi
ENSFCAG00000004510	VARS	100	94.304	ENSNLEG00000006351	VARS	100	94.304	Nomascus_leucogenys
ENSFCAG00000004510	VARS	100	82.832	ENSMEUG00000011378	VARS	100	82.832	Notamacropus_eugenii
ENSFCAG00000004510	VARS	100	93.196	ENSOPRG00000003607	VARS	100	93.196	Ochotona_princeps
ENSFCAG00000004510	VARS	100	90.427	ENSODEG00000017681	VARS	100	90.032	Octodon_degus
ENSFCAG00000004510	VARS	100	65.285	ENSONIG00000013064	vars	99	68.087	Oreochromis_niloticus
ENSFCAG00000004510	VARS	77	79.191	ENSOANG00000005400	VARS	98	78.359	Ornithorhynchus_anatinus
ENSFCAG00000004510	VARS	100	91.074	ENSOCUG00000022463	VARS	100	91.232	Oryctolagus_cuniculus
ENSFCAG00000004510	VARS	100	64.877	ENSORLG00000013063	vars	100	64.973	Oryzias_latipes
ENSFCAG00000004510	VARS	100	65.382	ENSORLG00020003504	vars	100	65.305	Oryzias_latipes_hni
ENSFCAG00000004510	VARS	100	65.557	ENSORLG00015009001	vars	100	65.402	Oryzias_latipes_hsok
ENSFCAG00000004510	VARS	100	65.046	ENSOMEG00000015016	vars	100	64.892	Oryzias_melastigma
ENSFCAG00000004510	VARS	100	94.304	ENSOGAG00000007515	VARS	100	94.304	Otolemur_garnettii
ENSFCAG00000004510	VARS	100	95.174	ENSPPAG00000034012	VARS	100	95.174	Pan_paniscus
ENSFCAG00000004510	VARS	100	99.684	ENSPPRG00000014855	VARS	100	99.684	Panthera_pardus
ENSFCAG00000004510	VARS	86	99.634	ENSPTIG00000010462	VARS	95	99.634	Panthera_tigris_altaica
ENSFCAG00000004510	VARS	100	95.095	ENSPTRG00000017985	VARS	100	95.095	Pan_troglodytes
ENSFCAG00000004510	VARS	100	93.139	ENSPANG00000014565	VARS	100	93.139	Papio_anubis
ENSFCAG00000004510	VARS	100	63.784	ENSPKIG00000016304	vars	100	63.784	Paramormyrops_kingsleyae
ENSFCAG00000004510	VARS	100	65.485	ENSPMGG00000023909	vars	100	65.485	Periophthalmus_magnuspinnatus
ENSFCAG00000004510	VARS	100	93.196	ENSPEMG00000006639	Vars	100	93.196	Peromyscus_maniculatus_bairdii
ENSFCAG00000004510	VARS	100	86.076	ENSPCIG00000018553	VARS	100	86.076	Phascolarctos_cinereus
ENSFCAG00000004510	VARS	100	65.992	ENSPFOG00000015690	vars	100	65.837	Poecilia_formosa
ENSFCAG00000004510	VARS	100	66.326	ENSPLAG00000009590	vars	100	66.090	Poecilia_latipinna
ENSFCAG00000004510	VARS	100	65.992	ENSPMEG00000004708	vars	100	65.837	Poecilia_mexicana
ENSFCAG00000004510	VARS	100	64.173	ENSPREG00000013264	vars	100	64.016	Poecilia_reticulata
ENSFCAG00000004510	VARS	100	93.354	ENSPPYG00000016460	VARS	100	93.354	Pongo_abelii
ENSFCAG00000004510	VARS	86	92.460	ENSPCAG00000013565	VARS	86	92.460	Procavia_capensis
ENSFCAG00000004510	VARS	100	94.466	ENSPCOG00000010942	VARS	100	94.862	Propithecus_coquereli
ENSFCAG00000004510	VARS	100	91.614	ENSPVAG00000012403	VARS	100	91.614	Pteropus_vampyrus
ENSFCAG00000004510	VARS	100	64.961	ENSPNYG00000022511	vars	100	64.802	Pundamilia_nyererei
ENSFCAG00000004510	VARS	100	65.066	ENSPNAG00000020962	vars	100	65.167	Pygocentrus_nattereri
ENSFCAG00000004510	VARS	100	93.434	ENSRNOG00000000867	Vars	100	93.434	Rattus_norvegicus
ENSFCAG00000004510	VARS	100	94.858	ENSRBIG00000041669	VARS	100	94.858	Rhinopithecus_bieti
ENSFCAG00000004510	VARS	100	94.858	ENSRROG00000045490	VARS	100	94.858	Rhinopithecus_roxellana
ENSFCAG00000004510	VARS	100	94.699	ENSSBOG00000035402	VARS	100	94.699	Saimiri_boliviensis_boliviensis
ENSFCAG00000004510	VARS	100	81.618	ENSSHAG00000006937	VARS	100	81.854	Sarcophilus_harrisii
ENSFCAG00000004510	VARS	100	64.219	ENSSFOG00015014272	vars	100	64.142	Scleropages_formosus
ENSFCAG00000004510	VARS	100	63.854	ENSSMAG00000009596	vars	99	63.770	Scophthalmus_maximus
ENSFCAG00000004510	VARS	100	64.783	ENSSDUG00000014177	vars	100	64.779	Seriola_dumerili
ENSFCAG00000004510	VARS	100	64.706	ENSSLDG00000025316	vars	100	64.701	Seriola_lalandi_dorsalis
ENSFCAG00000004510	VARS	100	65.035	ENSSPAG00000017068	vars	100	65.109	Stegastes_partitus
ENSFCAG00000004510	VARS	100	93.992	ENSSSCG00000038950	VARS	100	94.387	Sus_scrofa
ENSFCAG00000004510	VARS	81	65.049	ENSTRUG00000012307	vars	96	65.087	Takifugu_rubripes
ENSFCAG00000004510	VARS	100	64.945	ENSTNIG00000008011	vars	100	64.863	Tetraodon_nigroviridis
ENSFCAG00000004510	VARS	54	97.753	ENSTBEG00000004728	-	60	97.753	Tupaia_belangeri
ENSFCAG00000004510	VARS	100	86.788	ENSTTRG00000014128	VARS	100	86.788	Tursiops_truncatus
ENSFCAG00000004510	VARS	100	92.767	ENSUAMG00000010424	VARS	100	92.767	Ursus_americanus
ENSFCAG00000004510	VARS	93	96.984	ENSUMAG00000013486	VARS	98	96.984	Ursus_maritimus
ENSFCAG00000004510	VARS	100	95.257	ENSVVUG00000021323	VARS	100	95.020	Vulpes_vulpes
ENSFCAG00000004510	VARS	96	62.945	ENSXETG00000024076	vars	98	62.379	Xenopus_tropicalis
ENSFCAG00000004510	VARS	100	65.669	ENSXCOG00000019172	vars	100	65.512	Xiphophorus_couchianus
ENSFCAG00000004510	VARS	100	65.759	ENSXMAG00000010927	vars	100	65.603	Xiphophorus_maculatus