EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000004544 (Gene tree)
Gene ID: 101088076
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 40819 bases
Position: chrB1:85211709-85252527
Accession: 101088076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000004198	ResIII	PF04851.15	8.5e-11	1	1
ENSFCAP00000044138	ResIII	PF04851.15	8.5e-11	1	1
ENSFCAP00000004198	DEAD	PF00270.29	4.9e-06	1	1
ENSFCAP00000044138	DEAD	PF00270.29	4.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000066262	SMARCA5-201	4941	XM_003984979	ENSFCAP00000044138	1052 (aa)	XP_003985028	UPI000298B5A3
ENSFCAT00000004545	SMARCA5-202	4806	-	ENSFCAP00000004198	1052 (aa)	-	M3W2D9

Gene Model

Click here to download ENSFCAG00000004544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000004544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000004544	SMARCA5	93	85.729	ENSFCAG00000018496	SMARCA1	93	85.729
ENSFCAG00000004544	SMARCA5	54	43.206	ENSFCAG00000007777	CHD1L	62	43.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000004544	SMARCA5	100	98.764	ENSG00000153147	SMARCA5	100	98.764	Homo_sapiens
ENSFCAG00000004544	SMARCA5	100	99.905	ENSAMEG00000009585	SMARCA5	100	99.905	Ailuropoda_melanoleuca
ENSFCAG00000004544	SMARCA5	91	96.920	ENSAPLG00000009206	SMARCA5	100	96.920	Anas_platyrhynchos
ENSFCAG00000004544	SMARCA5	98	93.919	ENSACAG00000003038	SMARCA5	99	93.919	Anolis_carolinensis
ENSFCAG00000004544	SMARCA5	100	98.669	ENSANAG00000019345	SMARCA5	100	98.669	Aotus_nancymaae
ENSFCAG00000004544	SMARCA5	100	99.049	ENSBTAG00000003399	SMARCA5	100	99.049	Bos_taurus
ENSFCAG00000004544	SMARCA5	100	98.859	ENSCJAG00000002735	SMARCA5	100	98.859	Callithrix_jacchus
ENSFCAG00000004544	SMARCA5	100	99.525	ENSCAFG00000007525	SMARCA5	100	99.525	Canis_familiaris
ENSFCAG00000004544	SMARCA5	98	99.516	ENSCAFG00020025641	SMARCA5	99	99.516	Canis_lupus_dingo
ENSFCAG00000004544	SMARCA5	100	99.525	ENSCHIG00000013730	-	100	99.525	Capra_hircus
ENSFCAG00000004544	SMARCA5	100	97.814	ENSCHIG00000016375	-	100	97.814	Capra_hircus
ENSFCAG00000004544	SMARCA5	99	95.985	ENSTSYG00000009954	SMARCA5	99	99.799	Carlito_syrichta
ENSFCAG00000004544	SMARCA5	92	99.174	ENSCAPG00000013747	SMARCA5	95	99.174	Cavia_aperea
ENSFCAG00000004544	SMARCA5	100	98.004	ENSCPOG00000002259	SMARCA5	100	98.004	Cavia_porcellus
ENSFCAG00000004544	SMARCA5	100	98.859	ENSCCAG00000027215	SMARCA5	100	98.859	Cebus_capucinus
ENSFCAG00000004544	SMARCA5	100	98.859	ENSCATG00000044917	SMARCA5	100	98.859	Cercocebus_atys
ENSFCAG00000004544	SMARCA5	96	98.121	ENSCLAG00000006153	SMARCA5	100	99.496	Chinchilla_lanigera
ENSFCAG00000004544	SMARCA5	92	99.587	ENSCSAG00000003448	SMARCA5	100	99.587	Chlorocebus_sabaeus
ENSFCAG00000004544	SMARCA5	90	98.519	ENSCHOG00000011724	SMARCA5	90	98.519	Choloepus_hoffmanni
ENSFCAG00000004544	SMARCA5	96	96.188	ENSCPBG00000027535	SMARCA5	96	98.098	Chrysemys_picta_bellii
ENSFCAG00000004544	SMARCA5	100	98.669	ENSCANG00000041629	SMARCA5	100	98.669	Colobus_angolensis_palliatus
ENSFCAG00000004544	SMARCA5	99	98.099	ENSCGRG00001012719	Smarca5	99	98.099	Cricetulus_griseus_chok1gshd
ENSFCAG00000004544	SMARCA5	95	99.398	ENSCGRG00000001417	Smarca5	99	99.597	Cricetulus_griseus_crigri
ENSFCAG00000004544	SMARCA5	98	95.745	ENSDNOG00000009158	SMARCA5	98	95.910	Dasypus_novemcinctus
ENSFCAG00000004544	SMARCA5	90	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSFCAG00000004544	SMARCA5	92	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSFCAG00000004544	SMARCA5	100	99.335	ENSEASG00005001866	SMARCA5	100	99.335	Equus_asinus_asinus
ENSFCAG00000004544	SMARCA5	100	99.335	ENSECAG00000002676	SMARCA5	100	99.335	Equus_caballus
ENSFCAG00000004544	SMARCA5	94	95.267	ENSEEUG00000013176	SMARCA5	100	95.267	Erinaceus_europaeus
ENSFCAG00000004544	SMARCA5	92	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSFCAG00000004544	SMARCA5	92	97.526	ENSFALG00000004987	SMARCA5	100	97.526	Ficedula_albicollis
ENSFCAG00000004544	SMARCA5	99	95.977	ENSFDAG00000021016	SMARCA5	100	99.698	Fukomys_damarensis
ENSFCAG00000004544	SMARCA5	99	85.043	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSFCAG00000004544	SMARCA5	97	96.369	ENSGALG00000009913	SMARCA5	96	97.598	Gallus_gallus
ENSFCAG00000004544	SMARCA5	96	87.968	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSFCAG00000004544	SMARCA5	96	97.438	ENSGAGG00000019882	SMARCA5	96	98.198	Gopherus_agassizii
ENSFCAG00000004544	SMARCA5	100	98.764	ENSGGOG00000012595	SMARCA5	100	98.764	Gorilla_gorilla
ENSFCAG00000004544	SMARCA5	100	97.909	ENSHGLG00000000816	-	99	97.909	Heterocephalus_glaber_female
ENSFCAG00000004544	SMARCA5	96	89.652	ENSHGLG00000000317	-	95	89.780	Heterocephalus_glaber_female
ENSFCAG00000004544	SMARCA5	96	97.923	ENSHGLG00100018421	-	100	99.597	Heterocephalus_glaber_male
ENSFCAG00000004544	SMARCA5	100	98.860	ENSSTOG00000010683	SMARCA5	99	98.860	Ictidomys_tridecemlineatus
ENSFCAG00000004544	SMARCA5	100	98.194	ENSJJAG00000014965	Smarca5	100	98.194	Jaculus_jaculus
ENSFCAG00000004544	SMARCA5	94	95.661	ENSLACG00000007091	SMARCA5	97	95.661	Latimeria_chalumnae
ENSFCAG00000004544	SMARCA5	94	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSFCAG00000004544	SMARCA5	100	98.764	ENSLAFG00000007795	SMARCA5	100	98.764	Loxodonta_africana
ENSFCAG00000004544	SMARCA5	100	98.859	ENSMFAG00000043649	SMARCA5	100	98.859	Macaca_fascicularis
ENSFCAG00000004544	SMARCA5	100	98.859	ENSMMUG00000000829	SMARCA5	100	98.859	Macaca_mulatta
ENSFCAG00000004544	SMARCA5	100	98.859	ENSMNEG00000031916	SMARCA5	100	98.859	Macaca_nemestrina
ENSFCAG00000004544	SMARCA5	100	98.859	ENSMLEG00000042393	SMARCA5	100	98.859	Mandrillus_leucophaeus
ENSFCAG00000004544	SMARCA5	95	97.300	ENSMGAG00000003517	SMARCA5	99	97.300	Meleagris_gallopavo
ENSFCAG00000004544	SMARCA5	94	99.698	ENSMAUG00000015902	Smarca5	98	99.698	Mesocricetus_auratus
ENSFCAG00000004544	SMARCA5	100	99.049	ENSMICG00000003971	SMARCA5	100	99.049	Microcebus_murinus
ENSFCAG00000004544	SMARCA5	99	97.719	ENSMOCG00000016986	-	99	97.719	Microtus_ochrogaster
ENSFCAG00000004544	SMARCA5	100	96.114	ENSMODG00000000391	SMARCA5	97	97.176	Monodelphis_domestica
ENSFCAG00000004544	SMARCA5	100	98.194	ENSMUSG00000031715	Smarca5	100	98.194	Mus_musculus
ENSFCAG00000004544	SMARCA5	100	98.384	MGP_PahariEiJ_G0022862	Smarca5	100	98.384	Mus_pahari
ENSFCAG00000004544	SMARCA5	100	99.240	ENSMLUG00000000468	SMARCA5	100	99.240	Myotis_lucifugus
ENSFCAG00000004544	SMARCA5	100	98.004	ENSNGAG00000000441	Smarca5	100	98.004	Nannospalax_galili
ENSFCAG00000004544	SMARCA5	100	98.859	ENSNLEG00000005383	SMARCA5	100	98.859	Nomascus_leucogenys
ENSFCAG00000004544	SMARCA5	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSFCAG00000004544	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSFCAG00000004544	SMARCA5	92	99.174	ENSOANG00000013921	SMARCA5	100	99.174	Ornithorhynchus_anatinus
ENSFCAG00000004544	SMARCA5	92	99.794	ENSOCUG00000013042	SMARCA5	100	99.794	Oryctolagus_cuniculus
ENSFCAG00000004544	SMARCA5	100	99.049	ENSOGAG00000009702	SMARCA5	100	99.049	Otolemur_garnettii
ENSFCAG00000004544	SMARCA5	99	99.239	ENSOARG00000010589	SMARCA5	99	99.239	Ovis_aries
ENSFCAG00000004544	SMARCA5	100	98.574	ENSPPAG00000028523	SMARCA5	100	98.574	Pan_paniscus
ENSFCAG00000004544	SMARCA5	98	94.255	ENSPPRG00000004925	SMARCA5	98	95.131	Panthera_pardus
ENSFCAG00000004544	SMARCA5	96	100.000	ENSPTIG00000020959	SMARCA5	97	100.000	Panthera_tigris_altaica
ENSFCAG00000004544	SMARCA5	100	98.669	ENSPTRG00000016472	SMARCA5	100	98.669	Pan_troglodytes
ENSFCAG00000004544	SMARCA5	100	98.859	ENSPANG00000001175	SMARCA5	100	98.859	Papio_anubis
ENSFCAG00000004544	SMARCA5	93	90.881	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSFCAG00000004544	SMARCA5	95	89.500	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSFCAG00000004544	SMARCA5	95	96.289	ENSPSIG00000004177	SMARCA5	100	96.289	Pelodiscus_sinensis
ENSFCAG00000004544	SMARCA5	92	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSFCAG00000004544	SMARCA5	97	97.839	ENSPEMG00000008060	Smarca5	99	97.839	Peromyscus_maniculatus_bairdii
ENSFCAG00000004544	SMARCA5	96	69.676	ENSPMAG00000006011	SMARCA5	81	85.600	Petromyzon_marinus
ENSFCAG00000004544	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSFCAG00000004544	SMARCA5	100	95.648	ENSPCIG00000003926	SMARCA5	95	99.098	Phascolarctos_cinereus
ENSFCAG00000004544	SMARCA5	100	98.764	ENSPPYG00000015091	SMARCA5	100	98.764	Pongo_abelii
ENSFCAG00000004544	SMARCA5	86	90.390	ENSPCAG00000014230	SMARCA5	89	90.440	Procavia_capensis
ENSFCAG00000004544	SMARCA5	100	96.388	ENSPCOG00000026744	SMARCA5	100	96.388	Propithecus_coquereli
ENSFCAG00000004544	SMARCA5	99	99.049	ENSPVAG00000006482	SMARCA5	100	99.049	Pteropus_vampyrus
ENSFCAG00000004544	SMARCA5	97	88.235	ENSPNAG00000027824	SMARCA5	97	90.456	Pygocentrus_nattereri
ENSFCAG00000004544	SMARCA5	95	99.497	ENSRNOG00000018149	Smarca5	100	99.497	Rattus_norvegicus
ENSFCAG00000004544	SMARCA5	100	98.670	ENSRBIG00000044644	SMARCA5	100	98.670	Rhinopithecus_bieti
ENSFCAG00000004544	SMARCA5	98	98.548	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSFCAG00000004544	SMARCA5	100	98.764	ENSSBOG00000036257	SMARCA5	100	98.764	Saimiri_boliviensis_boliviensis
ENSFCAG00000004544	SMARCA5	94	99.194	ENSSHAG00000008464	SMARCA5	100	99.194	Sarcophilus_harrisii
ENSFCAG00000004544	SMARCA5	99	87.140	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSFCAG00000004544	SMARCA5	99	93.359	ENSSPUG00000007604	SMARCA5	99	96.583	Sphenodon_punctatus
ENSFCAG00000004544	SMARCA5	100	98.859	ENSSSCG00000009047	SMARCA5	100	98.859	Sus_scrofa
ENSFCAG00000004544	SMARCA5	96	96.230	ENSTGUG00000002408	SMARCA5	100	96.230	Taeniopygia_guttata
ENSFCAG00000004544	SMARCA5	98	99.709	ENSUAMG00000023495	SMARCA5	99	99.709	Ursus_americanus
ENSFCAG00000004544	SMARCA5	95	100.000	ENSUMAG00000015324	SMARCA5	97	100.000	Ursus_maritimus
ENSFCAG00000004544	SMARCA5	100	98.954	ENSVPAG00000008982	SMARCA5	100	98.954	Vicugna_pacos
ENSFCAG00000004544	SMARCA5	100	99.715	ENSVVUG00000017473	SMARCA5	100	99.715	Vulpes_vulpes
ENSFCAG00000004544	SMARCA5	95	89.100	ENSXETG00000017566	smarca5	95	93.242	Xenopus_tropicalis