EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000005101 (Gene tree)
Gene ID: 101094839
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 205060 bases
Position: chrA3:67572155-67777214
Accession: 101094839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000028591	S1	PF00575.23	2.8e-09	1	1
ENSFCAP00000029906	S1	PF00575.23	3e-09	1	1
ENSFCAP00000004725	S1	PF00575.23	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000042042	SRBD1-202	3652	XM_003983938	ENSFCAP00000029906	996 (aa)	XP_003983987	A0A2I2UBP4
ENSFCAT00000045089	SRBD1-203	2883	-	ENSFCAP00000028591	960 (aa)	-	A0A2I2U840
ENSFCAT00000005102	SRBD1-201	4160	XM_019827137	ENSFCAP00000004725	1013 (aa)	XP_019682696	M3W3G9

Gene Model

Click here to download ENSFCAG00000005101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000005101's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000005101	SRBD1	100	90.964	ENSG00000068784	SRBD1	100	90.964	Homo_sapiens
ENSFCAG00000005101	SRBD1	100	51.203	ENSAPOG00000005103	si:ch211-117n7.8	83	57.901	Acanthochromis_polyacanthus
ENSFCAG00000005101	SRBD1	100	96.084	ENSAMEG00000005993	SRBD1	100	96.084	Ailuropoda_melanoleuca
ENSFCAG00000005101	SRBD1	83	57.888	ENSACIG00000009875	si:ch211-117n7.8	85	57.913	Amphilophus_citrinellus
ENSFCAG00000005101	SRBD1	99	51.556	ENSAOCG00000024718	si:ch211-117n7.8	83	58.314	Amphiprion_ocellaris
ENSFCAG00000005101	SRBD1	83	58.432	ENSAPEG00000002645	si:ch211-117n7.8	86	58.432	Amphiprion_percula
ENSFCAG00000005101	SRBD1	99	51.938	ENSATEG00000010844	si:ch211-117n7.8	85	57.488	Anabas_testudineus
ENSFCAG00000005101	SRBD1	100	70.958	ENSAPLG00000006313	SRBD1	100	70.817	Anas_platyrhynchos
ENSFCAG00000005101	SRBD1	100	90.763	ENSANAG00000025573	SRBD1	100	90.763	Aotus_nancymaae
ENSFCAG00000005101	SRBD1	84	56.577	ENSACLG00000024219	si:ch211-117n7.8	83	56.860	Astatotilapia_calliptera
ENSFCAG00000005101	SRBD1	85	60.233	ENSAMXG00000004294	SRBD1	93	56.426	Astyanax_mexicanus
ENSFCAG00000005101	SRBD1	100	91.667	ENSBTAG00000007508	SRBD1	97	92.369	Bos_taurus
ENSFCAG00000005101	SRBD1	100	90.161	ENSCJAG00000000727	SRBD1	100	90.161	Callithrix_jacchus
ENSFCAG00000005101	SRBD1	100	95.186	ENSCAFG00000002554	SRBD1	100	95.186	Canis_familiaris
ENSFCAG00000005101	SRBD1	100	92.269	ENSCAFG00020026284	SRBD1	99	93.852	Canis_lupus_dingo
ENSFCAG00000005101	SRBD1	100	92.169	ENSCHIG00000016535	SRBD1	100	91.189	Capra_hircus
ENSFCAG00000005101	SRBD1	100	92.285	ENSTSYG00000012797	SRBD1	100	92.285	Carlito_syrichta
ENSFCAG00000005101	SRBD1	100	89.960	ENSCPOG00000004773	SRBD1	100	89.960	Cavia_porcellus
ENSFCAG00000005101	SRBD1	100	91.265	ENSCCAG00000025589	SRBD1	100	91.265	Cebus_capucinus
ENSFCAG00000005101	SRBD1	100	91.968	ENSCATG00000039530	SRBD1	100	91.968	Cercocebus_atys
ENSFCAG00000005101	SRBD1	100	90.791	ENSCLAG00000008623	SRBD1	100	90.791	Chinchilla_lanigera
ENSFCAG00000005101	SRBD1	100	92.169	ENSCSAG00000013350	SRBD1	100	92.169	Chlorocebus_sabaeus
ENSFCAG00000005101	SRBD1	87	96.078	ENSCHOG00000003805	SRBD1	87	96.078	Choloepus_hoffmanni
ENSFCAG00000005101	SRBD1	100	74.148	ENSCPBG00000005677	SRBD1	100	73.922	Chrysemys_picta_bellii
ENSFCAG00000005101	SRBD1	79	42.748	ENSCING00000005950	-	99	42.748	Ciona_intestinalis
ENSFCAG00000005101	SRBD1	79	42.893	ENSCSAVG00000000861	-	99	42.893	Ciona_savignyi
ENSFCAG00000005101	SRBD1	99	91.549	ENSCANG00000016307	SRBD1	99	91.549	Colobus_angolensis_palliatus
ENSFCAG00000005101	SRBD1	100	86.044	ENSCGRG00001000513	Srbd1	100	86.044	Cricetulus_griseus_chok1gshd
ENSFCAG00000005101	SRBD1	100	86.044	ENSCGRG00000002283	Srbd1	100	86.044	Cricetulus_griseus_crigri
ENSFCAG00000005101	SRBD1	85	55.886	ENSCSEG00000000856	si:ch211-117n7.8	86	56.000	Cynoglossus_semilaevis
ENSFCAG00000005101	SRBD1	83	57.597	ENSCVAG00000020212	si:ch211-117n7.8	89	57.597	Cyprinodon_variegatus
ENSFCAG00000005101	SRBD1	100	92.392	ENSDNOG00000018686	SRBD1	100	92.392	Dasypus_novemcinctus
ENSFCAG00000005101	SRBD1	100	88.253	ENSDORG00000010468	Srbd1	100	88.253	Dipodomys_ordii
ENSFCAG00000005101	SRBD1	94	34.704	FBgn0051156	CG31156	99	34.900	Drosophila_melanogaster
ENSFCAG00000005101	SRBD1	89	83.066	ENSETEG00000000739	SRBD1	91	83.066	Echinops_telfairi
ENSFCAG00000005101	SRBD1	73	48.098	ENSEBUG00000008902	si:ch211-117n7.8	96	48.098	Eptatretus_burgeri
ENSFCAG00000005101	SRBD1	100	91.365	ENSEASG00005003132	SRBD1	97	94.904	Equus_asinus_asinus
ENSFCAG00000005101	SRBD1	100	94.779	ENSECAG00000013865	SRBD1	98	94.779	Equus_caballus
ENSFCAG00000005101	SRBD1	86	59.238	ENSELUG00000012592	si:ch211-117n7.8	82	59.238	Esox_lucius
ENSFCAG00000005101	SRBD1	100	68.762	ENSFALG00000012966	SRBD1	100	68.263	Ficedula_albicollis
ENSFCAG00000005101	SRBD1	98	87.988	ENSFDAG00000016670	SRBD1	98	88.266	Fukomys_damarensis
ENSFCAG00000005101	SRBD1	96	52.959	ENSFHEG00000019480	si:ch211-117n7.8	93	52.959	Fundulus_heteroclitus
ENSFCAG00000005101	SRBD1	52	52.135	ENSGMOG00000018010	-	100	52.135	Gadus_morhua
ENSFCAG00000005101	SRBD1	100	70.120	ENSGALG00000009990	SRBD1	100	69.428	Gallus_gallus
ENSFCAG00000005101	SRBD1	98	51.241	ENSGAFG00000019664	si:ch211-117n7.8	97	51.564	Gambusia_affinis
ENSFCAG00000005101	SRBD1	62	61.440	ENSGACG00000010794	si:ch211-117n7.8	100	61.600	Gasterosteus_aculeatus
ENSFCAG00000005101	SRBD1	84	81.557	ENSGAGG00000006166	SRBD1	99	81.557	Gopherus_agassizii
ENSFCAG00000005101	SRBD1	97	91.340	ENSGGOG00000005910	SRBD1	99	91.277	Gorilla_gorilla
ENSFCAG00000005101	SRBD1	84	50.355	ENSHBUG00000013207	si:ch211-117n7.8	86	50.651	Haplochromis_burtoni
ENSFCAG00000005101	SRBD1	99	89.638	ENSHGLG00000018153	-	99	89.638	Heterocephalus_glaber_female
ENSFCAG00000005101	SRBD1	99	89.437	ENSHGLG00100015183	-	99	89.437	Heterocephalus_glaber_male
ENSFCAG00000005101	SRBD1	85	61.079	ENSIPUG00000009661	srbd1	94	56.315	Ictalurus_punctatus
ENSFCAG00000005101	SRBD1	100	91.867	ENSSTOG00000005898	SRBD1	100	91.867	Ictidomys_tridecemlineatus
ENSFCAG00000005101	SRBD1	100	81.663	ENSJJAG00000022244	Srbd1	100	81.663	Jaculus_jaculus
ENSFCAG00000005101	SRBD1	99	51.541	ENSKMAG00000003473	si:ch211-117n7.8	83	57.412	Kryptolebias_marmoratus
ENSFCAG00000005101	SRBD1	98	51.468	ENSLBEG00000027518	si:ch211-117n7.8	93	52.826	Labrus_bergylta
ENSFCAG00000005101	SRBD1	85	71.311	ENSLACG00000009790	SRBD1	100	71.311	Latimeria_chalumnae
ENSFCAG00000005101	SRBD1	100	57.522	ENSLOCG00000016360	si:ch211-117n7.8	99	57.522	Lepisosteus_oculatus
ENSFCAG00000005101	SRBD1	100	92.269	ENSMFAG00000042026	SRBD1	100	92.269	Macaca_fascicularis
ENSFCAG00000005101	SRBD1	100	91.968	ENSMMUG00000003490	SRBD1	100	91.968	Macaca_mulatta
ENSFCAG00000005101	SRBD1	100	89.558	ENSMNEG00000034701	SRBD1	100	89.558	Macaca_nemestrina
ENSFCAG00000005101	SRBD1	100	91.867	ENSMLEG00000000745	SRBD1	100	91.867	Mandrillus_leucophaeus
ENSFCAG00000005101	SRBD1	86	55.683	ENSMAMG00000021921	si:ch211-117n7.8	86	55.683	Mastacembelus_armatus
ENSFCAG00000005101	SRBD1	84	56.577	ENSMZEG00005027369	si:ch211-117n7.8	83	56.860	Maylandia_zebra
ENSFCAG00000005101	SRBD1	80	75.659	ENSMGAG00000010273	SRBD1	99	75.659	Meleagris_gallopavo
ENSFCAG00000005101	SRBD1	79	87.346	ENSMAUG00000013916	Srbd1	99	84.852	Mesocricetus_auratus
ENSFCAG00000005101	SRBD1	100	93.675	ENSMICG00000007835	SRBD1	100	93.675	Microcebus_murinus
ENSFCAG00000005101	SRBD1	100	84.538	ENSMOCG00000018716	Srbd1	100	84.538	Microtus_ochrogaster
ENSFCAG00000005101	SRBD1	84	56.287	ENSMMOG00000007507	si:ch211-117n7.8	87	56.287	Mola_mola
ENSFCAG00000005101	SRBD1	99	51.553	ENSMALG00000001562	si:ch211-117n7.8	87	54.900	Monopterus_albus
ENSFCAG00000005101	SRBD1	100	82.430	MGP_CAROLIEiJ_G0021934	Srbd1	99	83.706	Mus_caroli
ENSFCAG00000005101	SRBD1	100	82.530	ENSMUSG00000024135	Srbd1	100	82.530	Mus_musculus
ENSFCAG00000005101	SRBD1	100	81.526	MGP_PahariEiJ_G0020924	Srbd1	100	81.526	Mus_pahari
ENSFCAG00000005101	SRBD1	100	82.831	MGP_SPRETEiJ_G0022850	Srbd1	100	82.831	Mus_spretus
ENSFCAG00000005101	SRBD1	100	89.558	ENSMLUG00000007039	SRBD1	100	89.558	Myotis_lucifugus
ENSFCAG00000005101	SRBD1	100	85.044	ENSNGAG00000011893	Srbd1	100	84.653	Nannospalax_galili
ENSFCAG00000005101	SRBD1	84	55.740	ENSNBRG00000012873	si:ch211-117n7.8	85	56.280	Neolamprologus_brichardi
ENSFCAG00000005101	SRBD1	100	91.265	ENSNLEG00000016877	SRBD1	100	91.265	Nomascus_leucogenys
ENSFCAG00000005101	SRBD1	100	86.847	ENSODEG00000012095	SRBD1	100	86.847	Octodon_degus
ENSFCAG00000005101	SRBD1	96	52.240	ENSONIG00000000945	si:ch211-117n7.8	99	58.223	Oreochromis_niloticus
ENSFCAG00000005101	SRBD1	100	93.574	ENSOCUG00000015385	SRBD1	100	93.574	Oryctolagus_cuniculus
ENSFCAG00000005101	SRBD1	85	53.670	ENSORLG00000004427	si:ch211-117n7.8	84	53.670	Oryzias_latipes
ENSFCAG00000005101	SRBD1	99	50.386	ENSORLG00020012792	si:ch211-117n7.8	84	56.357	Oryzias_latipes_hni
ENSFCAG00000005101	SRBD1	85	56.372	ENSORLG00015018598	si:ch211-117n7.8	84	56.372	Oryzias_latipes_hsok
ENSFCAG00000005101	SRBD1	96	51.177	ENSOMEG00000012229	si:ch211-117n7.8	93	51.586	Oryzias_melastigma
ENSFCAG00000005101	SRBD1	100	86.546	ENSOGAG00000001076	SRBD1	100	86.546	Otolemur_garnettii
ENSFCAG00000005101	SRBD1	100	87.391	ENSOARG00000005958	SRBD1	100	88.070	Ovis_aries
ENSFCAG00000005101	SRBD1	100	91.365	ENSPPAG00000038442	SRBD1	100	91.365	Pan_paniscus
ENSFCAG00000005101	SRBD1	100	99.197	ENSPPRG00000003449	SRBD1	100	99.197	Panthera_pardus
ENSFCAG00000005101	SRBD1	100	99.197	ENSPTIG00000012495	SRBD1	100	99.197	Panthera_tigris_altaica
ENSFCAG00000005101	SRBD1	100	91.365	ENSPTRG00000011889	SRBD1	100	91.365	Pan_troglodytes
ENSFCAG00000005101	SRBD1	100	91.867	ENSPANG00000008063	SRBD1	100	91.867	Papio_anubis
ENSFCAG00000005101	SRBD1	83	60.384	ENSPKIG00000021973	si:ch211-117n7.8	85	60.384	Paramormyrops_kingsleyae
ENSFCAG00000005101	SRBD1	100	73.948	ENSPSIG00000008992	SRBD1	100	74.248	Pelodiscus_sinensis
ENSFCAG00000005101	SRBD1	90	53.435	ENSPMGG00000013348	si:ch211-117n7.8	98	51.313	Periophthalmus_magnuspinnatus
ENSFCAG00000005101	SRBD1	100	83.235	ENSPEMG00000020684	Srbd1	100	83.235	Peromyscus_maniculatus_bairdii
ENSFCAG00000005101	SRBD1	98	51.619	ENSPFOG00000010650	si:ch211-117n7.8	93	53.086	Poecilia_formosa
ENSFCAG00000005101	SRBD1	98	51.383	ENSPLAG00000002141	si:ch211-117n7.8	97	51.707	Poecilia_latipinna
ENSFCAG00000005101	SRBD1	98	51.816	ENSPMEG00000018537	si:ch211-117n7.8	93	53.472	Poecilia_mexicana
ENSFCAG00000005101	SRBD1	88	54.956	ENSPREG00000003258	si:ch211-117n7.8	91	54.956	Poecilia_reticulata
ENSFCAG00000005101	SRBD1	100	83.807	ENSPPYG00000012444	SRBD1	99	83.807	Pongo_abelii
ENSFCAG00000005101	SRBD1	82	82.781	ENSPCAG00000005629	SRBD1	85	82.781	Procavia_capensis
ENSFCAG00000005101	SRBD1	100	80.500	ENSPCOG00000017669	SRBD1	100	80.500	Propithecus_coquereli
ENSFCAG00000005101	SRBD1	100	83.835	ENSPVAG00000001782	SRBD1	100	83.835	Pteropus_vampyrus
ENSFCAG00000005101	SRBD1	84	53.892	ENSPNYG00000000508	si:ch211-117n7.8	86	54.181	Pundamilia_nyererei
ENSFCAG00000005101	SRBD1	96	57.541	ENSPNAG00000013492	SRBD1	95	57.128	Pygocentrus_nattereri
ENSFCAG00000005101	SRBD1	100	81.526	ENSRNOG00000014720	Srbd1	99	82.229	Rattus_norvegicus
ENSFCAG00000005101	SRBD1	99	91.449	ENSRBIG00000033486	SRBD1	99	91.449	Rhinopithecus_bieti
ENSFCAG00000005101	SRBD1	99	91.449	ENSRROG00000041599	SRBD1	99	91.449	Rhinopithecus_roxellana
ENSFCAG00000005101	SRBD1	100	90.863	ENSSBOG00000024982	SRBD1	100	90.863	Saimiri_boliviensis_boliviensis
ENSFCAG00000005101	SRBD1	83	59.716	ENSSFOG00015001128	si:ch211-117n7.8	90	59.716	Scleropages_formosus
ENSFCAG00000005101	SRBD1	90	54.545	ENSSMAG00000018256	si:ch211-117n7.8	89	54.644	Scophthalmus_maximus
ENSFCAG00000005101	SRBD1	85	56.502	ENSSLDG00000023189	si:ch211-117n7.8	84	56.502	Seriola_lalandi_dorsalis
ENSFCAG00000005101	SRBD1	100	79.819	ENSSARG00000009740	SRBD1	100	79.819	Sorex_araneus
ENSFCAG00000005101	SRBD1	85	79.645	ENSSPUG00000010475	SRBD1	98	76.966	Sphenodon_punctatus
ENSFCAG00000005101	SRBD1	84	55.047	ENSSPAG00000008092	-	84	55.634	Stegastes_partitus
ENSFCAG00000005101	SRBD1	100	92.972	ENSSSCG00000008445	SRBD1	98	93.574	Sus_scrofa
ENSFCAG00000005101	SRBD1	83	77.497	ENSTGUG00000003878	SRBD1	100	77.497	Taeniopygia_guttata
ENSFCAG00000005101	SRBD1	99	51.154	ENSTRUG00000007080	si:ch211-117n7.8	93	57.227	Takifugu_rubripes
ENSFCAG00000005101	SRBD1	99	50.877	ENSTNIG00000007464	si:ch211-117n7.8	97	51.357	Tetraodon_nigroviridis
ENSFCAG00000005101	SRBD1	83	98.936	ENSTBEG00000004556	SRBD1	82	98.936	Tupaia_belangeri
ENSFCAG00000005101	SRBD1	94	94.470	ENSTTRG00000011871	SRBD1	94	94.470	Tursiops_truncatus
ENSFCAG00000005101	SRBD1	100	95.884	ENSUAMG00000008126	SRBD1	97	98.195	Ursus_americanus
ENSFCAG00000005101	SRBD1	100	95.884	ENSUMAG00000012902	SRBD1	98	95.884	Ursus_maritimus
ENSFCAG00000005101	SRBD1	91	93.722	ENSVPAG00000006825	SRBD1	100	93.722	Vicugna_pacos
ENSFCAG00000005101	SRBD1	100	94.779	ENSVVUG00000005389	SRBD1	99	98.101	Vulpes_vulpes
ENSFCAG00000005101	SRBD1	100	52.223	ENSXETG00000002760	srbd1	100	52.318	Xenopus_tropicalis
ENSFCAG00000005101	SRBD1	98	51.234	ENSXMAG00000016861	si:ch211-117n7.8	93	52.572	Xiphophorus_maculatus