EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000005785 (Gene tree)
Gene ID: 101085899
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 115392 bases
Position: chrB4:11155109-11270500
Accession: 101085899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000034999	Upf2	PF04050.14	6.1e-33	1	1
ENSFCAP00000047901	Upf2	PF04050.14	6.1e-33	1	1
ENSFCAP00000049225	Upf2	PF04050.14	6.1e-33	1	1
ENSFCAP00000050677	Upf2	PF04050.14	1e-32	1	1
ENSFCAP00000005374	Upf2	PF04050.14	1.1e-32	1	1
ENSFCAP00000041396	Upf2	PF04050.14	1.1e-32	1	1
ENSFCAP00000020411	Upf2	PF04050.14	1.1e-32	1	1
ENSFCAP00000034999	MIF4G	PF02854.19	4e-76	1	3
ENSFCAP00000034999	MIF4G	PF02854.19	4e-76	2	3
ENSFCAP00000034999	MIF4G	PF02854.19	4e-76	3	3
ENSFCAP00000047901	MIF4G	PF02854.19	4e-76	1	3
ENSFCAP00000047901	MIF4G	PF02854.19	4e-76	2	3
ENSFCAP00000047901	MIF4G	PF02854.19	4e-76	3	3
ENSFCAP00000049225	MIF4G	PF02854.19	4e-76	1	3
ENSFCAP00000049225	MIF4G	PF02854.19	4e-76	2	3
ENSFCAP00000049225	MIF4G	PF02854.19	4e-76	3	3
ENSFCAP00000041396	MIF4G	PF02854.19	5.8e-76	1	3
ENSFCAP00000041396	MIF4G	PF02854.19	5.8e-76	2	3
ENSFCAP00000041396	MIF4G	PF02854.19	5.8e-76	3	3
ENSFCAP00000020411	MIF4G	PF02854.19	5.9e-76	1	3
ENSFCAP00000020411	MIF4G	PF02854.19	5.9e-76	2	3
ENSFCAP00000020411	MIF4G	PF02854.19	5.9e-76	3	3
ENSFCAP00000050677	MIF4G	PF02854.19	1.7e-71	1	3
ENSFCAP00000050677	MIF4G	PF02854.19	1.7e-71	2	3
ENSFCAP00000050677	MIF4G	PF02854.19	1.7e-71	3	3
ENSFCAP00000005374	MIF4G	PF02854.19	2.1e-62	1	2
ENSFCAP00000005374	MIF4G	PF02854.19	2.1e-62	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000064924	UPF2-203	5207	XM_011283561	ENSFCAP00000049225	1271 (aa)	XP_011281863	UPI00042C22D1
ENSFCAT00000044601	UPF2-202	8063	-	ENSFCAP00000034999	1271 (aa)	-	A0A2I2UR56
ENSFCAT00000062569	UPF2-204	5216	XM_019833926	ENSFCAP00000047901	1271 (aa)	XP_019689485	UPI00042C22D1
ENSFCAT00000023412	UPF2-205	4137	-	ENSFCAP00000020411	1372 (aa)	-	M3X1B8
ENSFCAT00000005790	UPF2-206	4020	-	ENSFCAP00000005374	1333 (aa)	-	M3W4Q0
ENSFCAT00000058925	UPF2-207	3948	-	ENSFCAP00000050677	1309 (aa)	-	UPI000DE7D24F
ENSFCAT00000065333	UPF2-201	8363	-	ENSFCAP00000041396	1371 (aa)	-	UPI000DE7C80D

Gene Model

Click here to download ENSFCAG00000005785's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03013	RNA transport	KEGG
fca03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000005785's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000005785	UPF2	100	97.563	ENSG00000151461	UPF2	100	99.448	Homo_sapiens
ENSFCAG00000005785	UPF2	99	78.935	ENSAPOG00000015837	UPF2	100	85.635	Acanthochromis_polyacanthus
ENSFCAG00000005785	UPF2	100	99.371	ENSAMEG00000004586	UPF2	100	99.371	Ailuropoda_melanoleuca
ENSFCAG00000005785	UPF2	99	82.812	ENSACIG00000018078	UPF2	100	86.034	Amphilophus_citrinellus
ENSFCAG00000005785	UPF2	100	82.995	ENSAOCG00000016766	UPF2	100	85.792	Amphiprion_ocellaris
ENSFCAG00000005785	UPF2	100	83.073	ENSAPEG00000019084	UPF2	100	85.792	Amphiprion_percula
ENSFCAG00000005785	UPF2	100	82.815	ENSATEG00000021677	UPF2	99	86.339	Anabas_testudineus
ENSFCAG00000005785	UPF2	92	96.067	ENSAPLG00000010287	UPF2	90	95.580	Anas_platyrhynchos
ENSFCAG00000005785	UPF2	100	92.840	ENSACAG00000009259	UPF2	100	96.133	Anolis_carolinensis
ENSFCAG00000005785	UPF2	92	100.000	ENSANAG00000028451	UPF2	99	99.441	Aotus_nancymaae
ENSFCAG00000005785	UPF2	100	81.201	ENSACLG00000012696	UPF2	100	85.635	Astatotilapia_calliptera
ENSFCAG00000005785	UPF2	99	83.255	ENSAMXG00000013700	UPF2	99	86.667	Astyanax_mexicanus
ENSFCAG00000005785	UPF2	100	98.977	ENSBTAG00000000288	UPF2	100	98.977	Bos_taurus
ENSFCAG00000005785	UPF2	100	97.563	ENSCJAG00000020685	UPF2	100	99.448	Callithrix_jacchus
ENSFCAG00000005785	UPF2	100	99.371	ENSCAFG00000004839	UPF2	100	99.371	Canis_familiaris
ENSFCAG00000005785	UPF2	97	99.507	ENSCAFG00020005882	UPF2	100	98.883	Canis_lupus_dingo
ENSFCAG00000005785	UPF2	100	99.056	ENSCHIG00000020359	UPF2	100	99.056	Capra_hircus
ENSFCAG00000005785	UPF2	100	97.482	ENSTSYG00000000935	UPF2	100	99.448	Carlito_syrichta
ENSFCAG00000005785	UPF2	91	87.435	ENSCAPG00000016658	UPF2	94	90.000	Cavia_aperea
ENSFCAG00000005785	UPF2	99	95.956	ENSCPOG00000008809	UPF2	99	99.441	Cavia_porcellus
ENSFCAG00000005785	UPF2	93	99.448	ENSCCAG00000035991	UPF2	100	99.448	Cebus_capucinus
ENSFCAG00000005785	UPF2	100	97.720	ENSCATG00000032679	UPF2	100	99.448	Cercocebus_atys
ENSFCAG00000005785	UPF2	100	97.718	ENSCLAG00000011434	UPF2	100	99.448	Chinchilla_lanigera
ENSFCAG00000005785	UPF2	100	97.799	ENSCSAG00000013372	UPF2	100	99.448	Chlorocebus_sabaeus
ENSFCAG00000005785	UPF2	87	98.884	ENSCHOG00000000422	UPF2	89	98.884	Choloepus_hoffmanni
ENSFCAG00000005785	UPF2	99	92.435	ENSCPBG00000027823	UPF2	100	97.765	Chrysemys_picta_bellii
ENSFCAG00000005785	UPF2	79	48.865	ENSCSAVG00000007772	-	99	47.610	Ciona_savignyi
ENSFCAG00000005785	UPF2	99	91.406	ENSCANG00000040396	UPF2	98	97.164	Colobus_angolensis_palliatus
ENSFCAG00000005785	UPF2	100	97.954	ENSCGRG00001019347	Upf2	100	98.895	Cricetulus_griseus_chok1gshd
ENSFCAG00000005785	UPF2	100	97.954	ENSCGRG00000017993	Upf2	100	98.895	Cricetulus_griseus_crigri
ENSFCAG00000005785	UPF2	91	81.293	ENSCSEG00000003520	UPF2	91	85.792	Cynoglossus_semilaevis
ENSFCAG00000005785	UPF2	99	83.032	ENSCVAG00000006167	UPF2	100	84.699	Cyprinodon_variegatus
ENSFCAG00000005785	UPF2	100	98.584	ENSDNOG00000018160	UPF2	100	98.584	Dasypus_novemcinctus
ENSFCAG00000005785	UPF2	100	97.482	ENSDORG00000002478	Upf2	100	97.790	Dipodomys_ordii
ENSFCAG00000005785	UPF2	89	36.559	FBgn0029992	Upf2	79	47.297	Drosophila_melanogaster
ENSFCAG00000005785	UPF2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSFCAG00000005785	UPF2	69	68.806	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSFCAG00000005785	UPF2	100	98.584	ENSEASG00005019274	UPF2	100	99.448	Equus_asinus_asinus
ENSFCAG00000005785	UPF2	100	98.662	ENSECAG00000017022	UPF2	100	99.448	Equus_caballus
ENSFCAG00000005785	UPF2	82	94.888	ENSEEUG00000007819	UPF2	82	96.685	Erinaceus_europaeus
ENSFCAG00000005785	UPF2	99	81.626	ENSELUG00000012014	UPF2	100	86.264	Esox_lucius
ENSFCAG00000005785	UPF2	100	94.256	ENSFALG00000001889	UPF2	98	96.685	Ficedula_albicollis
ENSFCAG00000005785	UPF2	100	97.561	ENSFDAG00000014348	UPF2	100	98.895	Fukomys_damarensis
ENSFCAG00000005785	UPF2	99	83.478	ENSFHEG00000009826	UPF2	99	84.153	Fundulus_heteroclitus
ENSFCAG00000005785	UPF2	91	82.902	ENSGMOG00000005557	UPF2	91	84.358	Gadus_morhua
ENSFCAG00000005785	UPF2	100	94.261	ENSGALG00000033772	UPF2	100	96.685	Gallus_gallus
ENSFCAG00000005785	UPF2	100	80.109	ENSGAFG00000020867	UPF2	100	85.792	Gambusia_affinis
ENSFCAG00000005785	UPF2	90	84.469	ENSGACG00000001080	UPF2	100	85.635	Gasterosteus_aculeatus
ENSFCAG00000005785	UPF2	100	93.784	ENSGAGG00000002700	UPF2	100	97.238	Gopherus_agassizii
ENSFCAG00000005785	UPF2	100	97.563	ENSGGOG00000001479	UPF2	100	99.448	Gorilla_gorilla
ENSFCAG00000005785	UPF2	100	81.045	ENSHBUG00000004249	UPF2	100	85.475	Haplochromis_burtoni
ENSFCAG00000005785	UPF2	100	97.718	ENSHGLG00000015176	-	100	99.448	Heterocephalus_glaber_female
ENSFCAG00000005785	UPF2	92	94.350	ENSHGLG00000003822	-	99	93.889	Heterocephalus_glaber_female
ENSFCAG00000005785	UPF2	99	94.484	ENSHGLG00100010036	UPF2	89	99.441	Heterocephalus_glaber_male
ENSFCAG00000005785	UPF2	100	80.808	ENSHCOG00000004025	UPF2	99	85.792	Hippocampus_comes
ENSFCAG00000005785	UPF2	100	81.981	ENSIPUG00000015524	UPF2	100	85.635	Ictalurus_punctatus
ENSFCAG00000005785	UPF2	100	98.269	ENSSTOG00000013075	UPF2	100	99.448	Ictidomys_tridecemlineatus
ENSFCAG00000005785	UPF2	100	96.538	ENSJJAG00000004913	Upf2	100	96.685	Jaculus_jaculus
ENSFCAG00000005785	UPF2	92	84.851	ENSKMAG00000001071	UPF2	92	85.792	Kryptolebias_marmoratus
ENSFCAG00000005785	UPF2	80	83.006	ENSLBEG00000000728	-	93	83.104	Labrus_bergylta
ENSFCAG00000005785	UPF2	100	83.294	ENSLBEG00000016394	-	100	85.635	Labrus_bergylta
ENSFCAG00000005785	UPF2	87	93.258	ENSLACG00000015945	UPF2	97	93.258	Latimeria_chalumnae
ENSFCAG00000005785	UPF2	99	86.761	ENSLOCG00000015698	UPF2	100	89.560	Lepisosteus_oculatus
ENSFCAG00000005785	UPF2	100	97.642	ENSMFAG00000043865	UPF2	100	99.448	Macaca_fascicularis
ENSFCAG00000005785	UPF2	100	97.642	ENSMMUG00000008241	UPF2	100	99.448	Macaca_mulatta
ENSFCAG00000005785	UPF2	81	96.878	ENSMNEG00000008062	UPF2	100	96.878	Macaca_nemestrina
ENSFCAG00000005785	UPF2	95	99.275	ENSMLEG00000036120	UPF2	100	99.448	Mandrillus_leucophaeus
ENSFCAG00000005785	UPF2	100	82.504	ENSMAMG00000018276	UPF2	100	85.792	Mastacembelus_armatus
ENSFCAG00000005785	UPF2	100	81.201	ENSMZEG00005021595	UPF2	100	85.635	Maylandia_zebra
ENSFCAG00000005785	UPF2	99	93.627	ENSMGAG00000004573	UPF2	99	96.111	Meleagris_gallopavo
ENSFCAG00000005785	UPF2	100	95.594	ENSMAUG00000016512	Upf2	100	98.895	Mesocricetus_auratus
ENSFCAG00000005785	UPF2	99	93.459	ENSMICG00000001716	UPF2	100	98.883	Microcebus_murinus
ENSFCAG00000005785	UPF2	100	96.853	ENSMOCG00000008263	Upf2	100	98.895	Microtus_ochrogaster
ENSFCAG00000005785	UPF2	90	83.377	ENSMMOG00000006528	UPF2	100	84.530	Mola_mola
ENSFCAG00000005785	UPF2	100	96.302	ENSMODG00000016794	UPF2	100	97.238	Monodelphis_domestica
ENSFCAG00000005785	UPF2	99	82.486	ENSMALG00000002663	UPF2	100	83.425	Monopterus_albus
ENSFCAG00000005785	UPF2	100	97.404	MGP_CAROLIEiJ_G0023157	Upf2	100	98.895	Mus_caroli
ENSFCAG00000005785	UPF2	100	97.246	ENSMUSG00000043241	Upf2	100	98.895	Mus_musculus
ENSFCAG00000005785	UPF2	100	96.853	MGP_PahariEiJ_G0019217	Upf2	100	98.895	Mus_pahari
ENSFCAG00000005785	UPF2	100	97.482	MGP_SPRETEiJ_G0024075	Upf2	100	98.895	Mus_spretus
ENSFCAG00000005785	UPF2	100	99.213	ENSMPUG00000001064	UPF2	100	99.448	Mustela_putorius_furo
ENSFCAG00000005785	UPF2	99	98.036	ENSMLUG00000000228	UPF2	100	99.441	Myotis_lucifugus
ENSFCAG00000005785	UPF2	100	81.201	ENSNBRG00000013629	UPF2	100	85.635	Neolamprologus_brichardi
ENSFCAG00000005785	UPF2	100	97.563	ENSNLEG00000012058	UPF2	100	99.448	Nomascus_leucogenys
ENSFCAG00000005785	UPF2	56	97.927	ENSMEUG00000002180	-	54	97.927	Notamacropus_eugenii
ENSFCAG00000005785	UPF2	76	100.000	ENSOPRG00000006801	-	77	100.000	Ochotona_princeps
ENSFCAG00000005785	UPF2	100	97.246	ENSODEG00000001290	UPF2	100	98.895	Octodon_degus
ENSFCAG00000005785	UPF2	100	81.279	ENSONIG00000017991	UPF2	100	86.188	Oreochromis_niloticus
ENSFCAG00000005785	UPF2	99	97.414	ENSOCUG00000006230	UPF2	100	98.324	Oryctolagus_cuniculus
ENSFCAG00000005785	UPF2	100	81.790	ENSORLG00000017189	UPF2	100	84.153	Oryzias_latipes
ENSFCAG00000005785	UPF2	100	81.790	ENSORLG00020005969	UPF2	100	84.153	Oryzias_latipes_hni
ENSFCAG00000005785	UPF2	100	81.790	ENSORLG00015005713	UPF2	100	84.153	Oryzias_latipes_hsok
ENSFCAG00000005785	UPF2	99	78.315	ENSOMEG00000023420	UPF2	98	84.530	Oryzias_melastigma
ENSFCAG00000005785	UPF2	100	97.482	ENSOGAG00000005796	UPF2	100	98.343	Otolemur_garnettii
ENSFCAG00000005785	UPF2	100	98.900	ENSOARG00000014587	UPF2	100	98.900	Ovis_aries
ENSFCAG00000005785	UPF2	99	93.667	ENSPPAG00000037953	UPF2	98	99.457	Pan_paniscus
ENSFCAG00000005785	UPF2	100	100.000	ENSPPRG00000000690	UPF2	100	100.000	Panthera_pardus
ENSFCAG00000005785	UPF2	100	100.000	ENSPTIG00000008867	UPF2	100	100.000	Panthera_tigris_altaica
ENSFCAG00000005785	UPF2	100	97.563	ENSPTRG00000002291	UPF2	100	99.448	Pan_troglodytes
ENSFCAG00000005785	UPF2	100	97.642	ENSPANG00000023399	UPF2	100	99.448	Papio_anubis
ENSFCAG00000005785	UPF2	100	82.137	ENSPKIG00000025502	UPF2	100	85.714	Paramormyrops_kingsleyae
ENSFCAG00000005785	UPF2	59	92.829	ENSPSIG00000015158	UPF2	95	92.829	Pelodiscus_sinensis
ENSFCAG00000005785	UPF2	99	81.068	ENSPMGG00000005259	UPF2	100	83.978	Periophthalmus_magnuspinnatus
ENSFCAG00000005785	UPF2	93	95.627	ENSPEMG00000015731	Upf2	99	95.627	Peromyscus_maniculatus_bairdii
ENSFCAG00000005785	UPF2	100	95.909	ENSPCIG00000006656	UPF2	100	96.133	Phascolarctos_cinereus
ENSFCAG00000005785	UPF2	100	80.265	ENSPFOG00000017118	UPF2	100	85.246	Poecilia_formosa
ENSFCAG00000005785	UPF2	100	80.265	ENSPLAG00000005094	UPF2	100	85.246	Poecilia_latipinna
ENSFCAG00000005785	UPF2	100	80.265	ENSPMEG00000017009	UPF2	100	85.246	Poecilia_mexicana
ENSFCAG00000005785	UPF2	99	80.266	ENSPREG00000021880	UPF2	100	85.083	Poecilia_reticulata
ENSFCAG00000005785	UPF2	66	99.163	ENSPPYG00000002089	-	100	99.448	Pongo_abelii
ENSFCAG00000005785	UPF2	93	98.343	ENSPCAG00000000684	UPF2	100	98.343	Procavia_capensis
ENSFCAG00000005785	UPF2	99	94.878	ENSPCOG00000021656	UPF2	100	99.435	Propithecus_coquereli
ENSFCAG00000005785	UPF2	92	100.000	ENSPVAG00000017286	UPF2	100	99.448	Pteropus_vampyrus
ENSFCAG00000005785	UPF2	92	86.932	ENSPNYG00000017096	UPF2	100	85.475	Pundamilia_nyererei
ENSFCAG00000005785	UPF2	100	83.463	ENSPNAG00000009357	UPF2	100	86.813	Pygocentrus_nattereri
ENSFCAG00000005785	UPF2	99	91.287	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSFCAG00000005785	UPF2	99	96.612	ENSRBIG00000037780	UPF2	100	99.441	Rhinopithecus_bieti
ENSFCAG00000005785	UPF2	100	97.563	ENSRROG00000043547	UPF2	100	99.448	Rhinopithecus_roxellana
ENSFCAG00000005785	UPF2	100	97.327	ENSSBOG00000020012	UPF2	100	99.448	Saimiri_boliviensis_boliviensis
ENSFCAG00000005785	UPF2	100	81.761	ENSSFOG00015023788	upf2	100	87.912	Scleropages_formosus
ENSFCAG00000005785	UPF2	90	82.827	ENSSMAG00000007637	UPF2	100	84.239	Scophthalmus_maximus
ENSFCAG00000005785	UPF2	100	82.995	ENSSDUG00000017244	UPF2	100	85.635	Seriola_dumerili
ENSFCAG00000005785	UPF2	99	81.519	ENSSLDG00000016866	UPF2	100	85.635	Seriola_lalandi_dorsalis
ENSFCAG00000005785	UPF2	100	96.302	ENSSARG00000008615	UPF2	100	98.895	Sorex_araneus
ENSFCAG00000005785	UPF2	99	91.102	ENSSPUG00000014544	UPF2	99	96.111	Sphenodon_punctatus
ENSFCAG00000005785	UPF2	68	98.849	ENSSSCG00000011117	-	100	99.448	Sus_scrofa
ENSFCAG00000005785	UPF2	99	94.243	ENSTGUG00000002163	-	100	97.191	Taeniopygia_guttata
ENSFCAG00000005785	UPF2	100	82.477	ENSTRUG00000007519	UPF2	99	84.153	Takifugu_rubripes
ENSFCAG00000005785	UPF2	100	80.171	ENSTNIG00000004453	UPF2	94	85.326	Tetraodon_nigroviridis
ENSFCAG00000005785	UPF2	85	98.864	ENSTBEG00000012679	UPF2	93	97.802	Tupaia_belangeri
ENSFCAG00000005785	UPF2	100	98.662	ENSTTRG00000016388	UPF2	100	98.895	Tursiops_truncatus
ENSFCAG00000005785	UPF2	94	100.000	ENSUAMG00000023560	UPF2	100	99.243	Ursus_americanus
ENSFCAG00000005785	UPF2	100	99.371	ENSUMAG00000012953	UPF2	95	99.448	Ursus_maritimus
ENSFCAG00000005785	UPF2	85	96.774	ENSVPAG00000006763	UPF2	86	96.774	Vicugna_pacos
ENSFCAG00000005785	UPF2	100	99.292	ENSVVUG00000006166	UPF2	100	99.292	Vulpes_vulpes
ENSFCAG00000005785	UPF2	100	83.333	ENSXETG00000033103	UPF2	91	89.023	Xenopus_tropicalis
ENSFCAG00000005785	UPF2	92	84.701	ENSXCOG00000011604	UPF2	100	85.083	Xiphophorus_couchianus
ENSFCAG00000005785	UPF2	100	80.109	ENSXMAG00000017209	UPF2	100	85.246	Xiphophorus_maculatus