EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000006376 (Gene tree)
Gene ID: 101086437
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 11833 bases
Position: chrE2:17953397-17965229
Accession: 101086437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000005928	RRM_1	PF00076.22	6.6e-18	1	1
ENSFCAP00000030167	RRM_1	PF00076.22	7.3e-18	1	1
ENSFCAP00000045501	RRM_1	PF00076.22	7.8e-18	1	1
ENSFCAP00000041155	RRM_1	PF00076.22	6.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000040376	RBM42-202	1478	XM_003997931	ENSFCAP00000030167	455 (aa)	XP_003997980	A0A2I2UCT9
ENSFCAT00000053497	RBM42-205	546	-	ENSFCAP00000041155	181 (aa)	-	UPI000DE7EF6B
ENSFCAT00000057083	RBM42-204	1152	-	ENSFCAP00000044505	383 (aa)	-	UPI000DE7D3AB
ENSFCAT00000006378	RBM42-203	1272	-	ENSFCAP00000005928	423 (aa)	-	M3W5T4
ENSFCAT00000053929	RBM42-201	5240	XM_003997930	ENSFCAP00000045501	477 (aa)	XP_003997979	UPI00029900E8

Gene Model

Click here to download ENSFCAG00000006376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000006376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000006376	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSFCAG00000006376	RBM42	100	100.000	ENSAMEG00000000524	RBM42	100	98.956	Ailuropoda_melanoleuca
ENSFCAG00000006376	RBM42	85	95.775	ENSACAG00000005495	RBM42	72	93.333	Anolis_carolinensis
ENSFCAG00000006376	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSFCAG00000006376	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.681	Bos_taurus
ENSFCAG00000006376	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSFCAG00000006376	RBM42	100	100.000	ENSCAFG00020018628	RBM42	100	97.826	Canis_lupus_dingo
ENSFCAG00000006376	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	97.694	Capra_hircus
ENSFCAG00000006376	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSFCAG00000006376	RBM42	81	97.927	ENSCAPG00000009566	RBM42	99	97.927	Cavia_aperea
ENSFCAG00000006376	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	97.904	Cavia_porcellus
ENSFCAG00000006376	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSFCAG00000006376	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSFCAG00000006376	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.694	Chinchilla_lanigera
ENSFCAG00000006376	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	96.288	Chlorocebus_sabaeus
ENSFCAG00000006376	RBM42	100	88.050	ENSCANG00000030272	RBM42	100	88.050	Colobus_angolensis_palliatus
ENSFCAG00000006376	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.484	Cricetulus_griseus_chok1gshd
ENSFCAG00000006376	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	97.083	Dasypus_novemcinctus
ENSFCAG00000006376	RBM42	100	97.065	ENSDORG00000013001	Rbm42	99	97.065	Dipodomys_ordii
ENSFCAG00000006376	RBM42	93	92.754	ENSETEG00000007878	RBM42	74	92.754	Echinops_telfairi
ENSFCAG00000006376	RBM42	100	100.000	ENSEASG00005001074	RBM42	100	97.143	Equus_asinus_asinus
ENSFCAG00000006376	RBM42	100	100.000	ENSECAG00000018215	RBM42	100	97.143	Equus_caballus
ENSFCAG00000006376	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.660	Fukomys_damarensis
ENSFCAG00000006376	RBM42	73	97.183	ENSGAGG00000014805	RBM42	64	92.086	Gopherus_agassizii
ENSFCAG00000006376	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSFCAG00000006376	RBM42	96	100.000	ENSHGLG00000008418	RBM42	99	95.807	Heterocephalus_glaber_female
ENSFCAG00000006376	RBM42	96	100.000	ENSHGLG00100018667	RBM42	99	95.807	Heterocephalus_glaber_male
ENSFCAG00000006376	RBM42	100	100.000	ENSSTOG00000013050	RBM42	100	97.065	Ictidomys_tridecemlineatus
ENSFCAG00000006376	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.646	Jaculus_jaculus
ENSFCAG00000006376	RBM42	100	95.807	ENSLAFG00000014993	RBM42	99	95.807	Loxodonta_africana
ENSFCAG00000006376	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSFCAG00000006376	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSFCAG00000006376	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSFCAG00000006376	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSFCAG00000006376	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSFCAG00000006376	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	97.694	Microtus_ochrogaster
ENSFCAG00000006376	RBM42	83	100.000	ENSMODG00000013957	RBM42	83	84.583	Monodelphis_domestica
ENSFCAG00000006376	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.275	Mus_caroli
ENSFCAG00000006376	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.275	Mus_musculus
ENSFCAG00000006376	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.694	Mus_pahari
ENSFCAG00000006376	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.275	Mus_spretus
ENSFCAG00000006376	RBM42	100	100.000	ENSMPUG00000006288	RBM42	100	98.242	Mustela_putorius_furo
ENSFCAG00000006376	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	97.694	Myotis_lucifugus
ENSFCAG00000006376	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	97.065	Nannospalax_galili
ENSFCAG00000006376	RBM42	71	99.007	ENSNLEG00000011272	-	94	91.341	Nomascus_leucogenys
ENSFCAG00000006376	RBM42	90	100.000	ENSMEUG00000016300	RBM42	100	84.200	Notamacropus_eugenii
ENSFCAG00000006376	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	89.937	Ochotona_princeps
ENSFCAG00000006376	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.484	Octodon_degus
ENSFCAG00000006376	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	95.852	Oryctolagus_cuniculus
ENSFCAG00000006376	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.275	Otolemur_garnettii
ENSFCAG00000006376	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	93.697	Ovis_aries
ENSFCAG00000006376	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSFCAG00000006376	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSFCAG00000006376	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSFCAG00000006376	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSFCAG00000006376	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSFCAG00000006376	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.904	Peromyscus_maniculatus_bairdii
ENSFCAG00000006376	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	84.792	Phascolarctos_cinereus
ENSFCAG00000006376	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	97.113	Pongo_abelii
ENSFCAG00000006376	RBM42	90	100.000	ENSPCAG00000013053	RBM42	100	82.809	Procavia_capensis
ENSFCAG00000006376	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSFCAG00000006376	RBM42	97	76.279	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSFCAG00000006376	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	98.742	Pteropus_vampyrus
ENSFCAG00000006376	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.484	Rattus_norvegicus
ENSFCAG00000006376	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSFCAG00000006376	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSFCAG00000006376	RBM42	90	98.421	ENSSBOG00000030666	RBM42	100	98.768	Saimiri_boliviensis_boliviensis
ENSFCAG00000006376	RBM42	100	87.500	ENSSARG00000010724	RBM42	100	87.500	Sorex_araneus
ENSFCAG00000006376	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.636	Sus_scrofa
ENSFCAG00000006376	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	99.161	Ursus_americanus
ENSFCAG00000006376	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	99.161	Ursus_maritimus
ENSFCAG00000006376	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	97.694	Vulpes_vulpes