EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000007970 (Gene tree)
Gene ID: 101084699
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 78733 bases
Position: chrA3:46597888-46676620
Accession: 101084699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000042953	XRN_N	PF03159.18	1e-102	1	1
ENSFCAP00000007387	XRN_N	PF03159.18	1.1e-102	1	1
ENSFCAP00000044721	XRN_N	PF03159.18	1.3e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000007974	XRN2-201	3485	XM_011280982	ENSFCAP00000007387	950 (aa)	XP_011279284	M3W8Q9
ENSFCAT00000067117	XRN2-203	3275	-	ENSFCAP00000042953	914 (aa)	-	UPI000DE7D6E1
ENSFCAT00000060465	XRN2-202	3275	-	ENSFCAP00000044721	914 (aa)	-	UPI000DE7D71D

Gene Model

Click here to download ENSFCAG00000007970's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03008	Ribosome biogenesis in eukaryotes	KEGG
fca03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000007970's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000007970	XRN2	71	35.036	ENSFCAG00000027589	XRN1	76	42.402

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000007970	XRN2	100	97.789	ENSG00000088930	XRN2	100	97.789	Homo_sapiens
ENSFCAG00000007970	XRN2	97	71.489	ENSAPOG00000009818	xrn2	100	70.234	Acanthochromis_polyacanthus
ENSFCAG00000007970	XRN2	100	99.263	ENSAMEG00000012581	XRN2	100	99.263	Ailuropoda_melanoleuca
ENSFCAG00000007970	XRN2	90	70.159	ENSACIG00000015047	xrn2	95	74.664	Amphilophus_citrinellus
ENSFCAG00000007970	XRN2	97	72.009	ENSAOCG00000023632	xrn2	100	70.761	Amphiprion_ocellaris
ENSFCAG00000007970	XRN2	97	71.838	ENSAPEG00000014871	xrn2	100	70.570	Amphiprion_percula
ENSFCAG00000007970	XRN2	95	71.398	ENSATEG00000001273	xrn2	97	70.719	Anabas_testudineus
ENSFCAG00000007970	XRN2	97	83.208	ENSAPLG00000013869	XRN2	99	83.638	Anas_platyrhynchos
ENSFCAG00000007970	XRN2	100	80.745	ENSACAG00000005565	XRN2	100	80.745	Anolis_carolinensis
ENSFCAG00000007970	XRN2	100	97.474	ENSANAG00000020126	XRN2	100	97.474	Aotus_nancymaae
ENSFCAG00000007970	XRN2	90	73.526	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSFCAG00000007970	XRN2	100	71.050	ENSAMXG00000018301	xrn2	100	71.050	Astyanax_mexicanus
ENSFCAG00000007970	XRN2	100	96.215	ENSBTAG00000011304	XRN2	100	96.215	Bos_taurus
ENSFCAG00000007970	XRN2	87	55.814	WBGene00006964	xrn-2	89	55.090	Caenorhabditis_elegans
ENSFCAG00000007970	XRN2	100	97.684	ENSCJAG00000005611	XRN2	100	97.684	Callithrix_jacchus
ENSFCAG00000007970	XRN2	100	99.158	ENSCAFG00000005185	XRN2	100	99.158	Canis_familiaris
ENSFCAG00000007970	XRN2	100	99.158	ENSCAFG00020027479	XRN2	100	99.158	Canis_lupus_dingo
ENSFCAG00000007970	XRN2	100	96.425	ENSCHIG00000006921	XRN2	100	96.425	Capra_hircus
ENSFCAG00000007970	XRN2	100	97.263	ENSTSYG00000008315	XRN2	100	97.263	Carlito_syrichta
ENSFCAG00000007970	XRN2	97	82.201	ENSCAPG00000010773	XRN2	99	82.093	Cavia_aperea
ENSFCAG00000007970	XRN2	100	97.474	ENSCPOG00000009407	XRN2	100	97.474	Cavia_porcellus
ENSFCAG00000007970	XRN2	100	98.105	ENSCATG00000040350	XRN2	100	98.105	Cercocebus_atys
ENSFCAG00000007970	XRN2	100	97.789	ENSCLAG00000013419	XRN2	100	97.789	Chinchilla_lanigera
ENSFCAG00000007970	XRN2	100	98.105	ENSCSAG00000011094	XRN2	100	98.105	Chlorocebus_sabaeus
ENSFCAG00000007970	XRN2	71	98.925	ENSCHOG00000013404	XRN2	70	98.925	Choloepus_hoffmanni
ENSFCAG00000007970	XRN2	100	84.583	ENSCPBG00000023533	XRN2	100	85.208	Chrysemys_picta_bellii
ENSFCAG00000007970	XRN2	86	60.501	ENSCING00000022336	-	100	60.859	Ciona_intestinalis
ENSFCAG00000007970	XRN2	87	59.308	ENSCSAVG00000011217	-	100	61.787	Ciona_savignyi
ENSFCAG00000007970	XRN2	100	98.105	ENSCANG00000040240	XRN2	100	98.105	Colobus_angolensis_palliatus
ENSFCAG00000007970	XRN2	98	96.125	ENSCGRG00001010676	Xrn2	99	96.125	Cricetulus_griseus_chok1gshd
ENSFCAG00000007970	XRN2	97	95.361	ENSCGRG00000006378	Xrn2	99	95.361	Cricetulus_griseus_crigri
ENSFCAG00000007970	XRN2	56	72.353	ENSCSEG00000005628	xrn2	100	72.353	Cynoglossus_semilaevis
ENSFCAG00000007970	XRN2	89	71.149	ENSCVAG00000018999	xrn2	98	76.952	Cyprinodon_variegatus
ENSFCAG00000007970	XRN2	100	69.713	ENSDARG00000101900	xrn2	96	78.203	Danio_rerio
ENSFCAG00000007970	XRN2	100	97.053	ENSDNOG00000001895	XRN2	100	97.053	Dasypus_novemcinctus
ENSFCAG00000007970	XRN2	100	95.053	ENSDORG00000005434	Xrn2	100	95.053	Dipodomys_ordii
ENSFCAG00000007970	XRN2	87	56.590	FBgn0031868	Rat1	90	55.699	Drosophila_melanogaster
ENSFCAG00000007970	XRN2	94	93.600	ENSETEG00000001740	XRN2	100	83.789	Echinops_telfairi
ENSFCAG00000007970	XRN2	84	71.515	ENSEBUG00000016136	xrn2	100	71.515	Eptatretus_burgeri
ENSFCAG00000007970	XRN2	100	98.105	ENSEASG00005002484	XRN2	100	98.105	Equus_asinus_asinus
ENSFCAG00000007970	XRN2	99	98.205	ENSECAG00000018988	XRN2	100	96.384	Equus_caballus
ENSFCAG00000007970	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSFCAG00000007970	XRN2	100	70.492	ENSELUG00000000552	xrn2	100	70.902	Esox_lucius
ENSFCAG00000007970	XRN2	100	82.704	ENSFALG00000004508	XRN2	100	83.124	Ficedula_albicollis
ENSFCAG00000007970	XRN2	100	97.368	ENSFDAG00000016311	XRN2	100	97.368	Fukomys_damarensis
ENSFCAG00000007970	XRN2	56	69.847	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSFCAG00000007970	XRN2	86	72.783	ENSGMOG00000013436	xrn2	100	72.783	Gadus_morhua
ENSFCAG00000007970	XRN2	100	82.827	ENSGALG00000008372	XRN2	100	82.827	Gallus_gallus
ENSFCAG00000007970	XRN2	89	73.372	ENSGAFG00000014284	xrn2	98	73.372	Gambusia_affinis
ENSFCAG00000007970	XRN2	87	74.399	ENSGACG00000011870	xrn2	100	74.399	Gasterosteus_aculeatus
ENSFCAG00000007970	XRN2	100	84.583	ENSGAGG00000004884	XRN2	100	85.208	Gopherus_agassizii
ENSFCAG00000007970	XRN2	100	98.000	ENSGGOG00000013738	XRN2	100	98.000	Gorilla_gorilla
ENSFCAG00000007970	XRN2	56	74.664	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSFCAG00000007970	XRN2	100	96.421	ENSHGLG00000014831	XRN2	100	96.421	Heterocephalus_glaber_female
ENSFCAG00000007970	XRN2	100	96.421	ENSHGLG00100013130	XRN2	100	96.421	Heterocephalus_glaber_male
ENSFCAG00000007970	XRN2	99	67.915	ENSHCOG00000011994	xrn2	99	68.826	Hippocampus_comes
ENSFCAG00000007970	XRN2	100	69.388	ENSIPUG00000006639	xrn2	100	69.388	Ictalurus_punctatus
ENSFCAG00000007970	XRN2	100	98.105	ENSSTOG00000000589	XRN2	100	98.105	Ictidomys_tridecemlineatus
ENSFCAG00000007970	XRN2	100	96.526	ENSJJAG00000022128	Xrn2	100	96.526	Jaculus_jaculus
ENSFCAG00000007970	XRN2	56	79.688	ENSLBEG00000010041	xrn2	100	79.688	Labrus_bergylta
ENSFCAG00000007970	XRN2	94	77.197	ENSLACG00000008307	XRN2	99	79.755	Latimeria_chalumnae
ENSFCAG00000007970	XRN2	99	72.699	ENSLOCG00000016874	xrn2	100	72.699	Lepisosteus_oculatus
ENSFCAG00000007970	XRN2	100	97.158	ENSLAFG00000014624	XRN2	100	97.158	Loxodonta_africana
ENSFCAG00000007970	XRN2	100	98.105	ENSMFAG00000038122	XRN2	100	98.105	Macaca_fascicularis
ENSFCAG00000007970	XRN2	100	98.105	ENSMMUG00000011405	XRN2	100	98.105	Macaca_mulatta
ENSFCAG00000007970	XRN2	100	98.211	ENSMNEG00000040626	XRN2	100	98.211	Macaca_nemestrina
ENSFCAG00000007970	XRN2	100	98.000	ENSMLEG00000041897	XRN2	100	98.000	Mandrillus_leucophaeus
ENSFCAG00000007970	XRN2	95	72.579	ENSMAMG00000008633	xrn2	98	71.069	Mastacembelus_armatus
ENSFCAG00000007970	XRN2	90	75.491	ENSMZEG00005022362	xrn2	97	75.491	Maylandia_zebra
ENSFCAG00000007970	XRN2	99	81.250	ENSMGAG00000003196	XRN2	99	81.250	Meleagris_gallopavo
ENSFCAG00000007970	XRN2	100	96.316	ENSMAUG00000021842	Xrn2	100	96.316	Mesocricetus_auratus
ENSFCAG00000007970	XRN2	100	97.158	ENSMICG00000008126	XRN2	100	97.158	Microcebus_murinus
ENSFCAG00000007970	XRN2	100	95.895	ENSMOCG00000012588	Xrn2	100	95.895	Microtus_ochrogaster
ENSFCAG00000007970	XRN2	89	73.654	ENSMMOG00000017576	xrn2	96	74.432	Mola_mola
ENSFCAG00000007970	XRN2	100	90.947	ENSMODG00000006163	XRN2	100	90.947	Monodelphis_domestica
ENSFCAG00000007970	XRN2	91	72.135	ENSMALG00000011355	xrn2	95	76.291	Monopterus_albus
ENSFCAG00000007970	XRN2	100	95.268	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.268	Mus_caroli
ENSFCAG00000007970	XRN2	100	95.478	ENSMUSG00000027433	Xrn2	100	95.478	Mus_musculus
ENSFCAG00000007970	XRN2	100	95.268	MGP_PahariEiJ_G0025843	Xrn2	100	95.268	Mus_pahari
ENSFCAG00000007970	XRN2	100	95.478	MGP_SPRETEiJ_G0025318	Xrn2	100	95.478	Mus_spretus
ENSFCAG00000007970	XRN2	100	97.518	ENSMPUG00000001198	XRN2	93	97.518	Mustela_putorius_furo
ENSFCAG00000007970	XRN2	100	97.368	ENSMLUG00000001536	XRN2	100	97.368	Myotis_lucifugus
ENSFCAG00000007970	XRN2	100	96.632	ENSNGAG00000018138	Xrn2	100	96.632	Nannospalax_galili
ENSFCAG00000007970	XRN2	90	75.694	ENSNBRG00000008062	xrn2	97	75.694	Neolamprologus_brichardi
ENSFCAG00000007970	XRN2	100	98.000	ENSNLEG00000009991	XRN2	100	98.000	Nomascus_leucogenys
ENSFCAG00000007970	XRN2	68	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSFCAG00000007970	XRN2	78	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSFCAG00000007970	XRN2	98	88.134	ENSODEG00000000860	-	99	88.565	Octodon_degus
ENSFCAG00000007970	XRN2	100	97.263	ENSODEG00000010745	-	100	97.263	Octodon_degus
ENSFCAG00000007970	XRN2	100	71.546	ENSONIG00000018720	xrn2	100	71.753	Oreochromis_niloticus
ENSFCAG00000007970	XRN2	100	91.071	ENSOANG00000015673	XRN2	100	91.071	Ornithorhynchus_anatinus
ENSFCAG00000007970	XRN2	100	98.105	ENSOCUG00000013468	XRN2	100	98.105	Oryctolagus_cuniculus
ENSFCAG00000007970	XRN2	98	70.197	ENSORLG00000017213	xrn2	97	74.827	Oryzias_latipes
ENSFCAG00000007970	XRN2	98	70.197	ENSORLG00020001824	xrn2	100	69.857	Oryzias_latipes_hni
ENSFCAG00000007970	XRN2	98	69.990	ENSORLG00015019747	xrn2	100	69.654	Oryzias_latipes_hsok
ENSFCAG00000007970	XRN2	90	73.988	ENSOMEG00000019820	xrn2	100	69.442	Oryzias_melastigma
ENSFCAG00000007970	XRN2	100	96.951	ENSOGAG00000001068	XRN2	100	96.951	Otolemur_garnettii
ENSFCAG00000007970	XRN2	97	96.328	ENSOARG00000004443	XRN2	100	96.328	Ovis_aries
ENSFCAG00000007970	XRN2	100	98.000	ENSPPAG00000033549	XRN2	100	98.000	Pan_paniscus
ENSFCAG00000007970	XRN2	100	100.000	ENSPPRG00000008732	XRN2	100	100.000	Panthera_pardus
ENSFCAG00000007970	XRN2	97	100.000	ENSPTIG00000015683	XRN2	97	100.000	Panthera_tigris_altaica
ENSFCAG00000007970	XRN2	100	98.000	ENSPTRG00000013308	XRN2	100	98.000	Pan_troglodytes
ENSFCAG00000007970	XRN2	100	98.105	ENSPANG00000018088	XRN2	100	98.105	Papio_anubis
ENSFCAG00000007970	XRN2	100	70.727	ENSPKIG00000016889	xrn2	100	70.727	Paramormyrops_kingsleyae
ENSFCAG00000007970	XRN2	81	87.109	ENSPSIG00000014666	XRN2	100	87.109	Pelodiscus_sinensis
ENSFCAG00000007970	XRN2	100	95.684	ENSPEMG00000000111	Xrn2	100	95.684	Peromyscus_maniculatus_bairdii
ENSFCAG00000007970	XRN2	100	69.782	ENSPFOG00000004182	xrn2	99	70.186	Poecilia_formosa
ENSFCAG00000007970	XRN2	89	74.070	ENSPLAG00000007351	xrn2	96	74.070	Poecilia_latipinna
ENSFCAG00000007970	XRN2	94	68.118	ENSPMEG00000011798	xrn2	99	68.988	Poecilia_mexicana
ENSFCAG00000007970	XRN2	89	73.953	ENSPREG00000012452	xrn2	99	72.391	Poecilia_reticulata
ENSFCAG00000007970	XRN2	100	97.579	ENSPPYG00000010755	XRN2	100	97.579	Pongo_abelii
ENSFCAG00000007970	XRN2	100	91.071	ENSPCAG00000011191	XRN2	100	91.071	Procavia_capensis
ENSFCAG00000007970	XRN2	100	90.421	ENSPCOG00000016468	XRN2	100	90.421	Propithecus_coquereli
ENSFCAG00000007970	XRN2	96	95.441	ENSPVAG00000004596	XRN2	93	95.441	Pteropus_vampyrus
ENSFCAG00000007970	XRN2	90	73.526	ENSPNYG00000001765	xrn2	97	73.526	Pundamilia_nyererei
ENSFCAG00000007970	XRN2	100	71.122	ENSPNAG00000010956	xrn2	99	71.122	Pygocentrus_nattereri
ENSFCAG00000007970	XRN2	100	96.215	ENSRNOG00000011785	Xrn2	100	96.215	Rattus_norvegicus
ENSFCAG00000007970	XRN2	86	98.166	ENSRBIG00000036193	XRN2	100	98.166	Rhinopithecus_bieti
ENSFCAG00000007970	XRN2	100	98.105	ENSRROG00000044400	XRN2	90	98.105	Rhinopithecus_roxellana
ENSFCAG00000007970	XRN2	66	55.820	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSFCAG00000007970	XRN2	100	97.789	ENSSBOG00000021014	XRN2	100	97.789	Saimiri_boliviensis_boliviensis
ENSFCAG00000007970	XRN2	100	71.930	ENSSFOG00015001091	xrn2	100	71.930	Scleropages_formosus
ENSFCAG00000007970	XRN2	92	73.138	ENSSMAG00000007834	xrn2	100	68.794	Scophthalmus_maximus
ENSFCAG00000007970	XRN2	91	71.833	ENSSDUG00000012802	xrn2	99	72.172	Seriola_dumerili
ENSFCAG00000007970	XRN2	93	73.559	ENSSLDG00000021273	xrn2	100	73.559	Seriola_lalandi_dorsalis
ENSFCAG00000007970	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSFCAG00000007970	XRN2	98	79.636	ENSSPUG00000005485	XRN2	96	79.701	Sphenodon_punctatus
ENSFCAG00000007970	XRN2	100	70.420	ENSSPAG00000016027	xrn2	99	70.420	Stegastes_partitus
ENSFCAG00000007970	XRN2	100	96.211	ENSSSCG00000007109	XRN2	100	96.211	Sus_scrofa
ENSFCAG00000007970	XRN2	100	81.524	ENSTGUG00000007535	XRN2	100	81.942	Taeniopygia_guttata
ENSFCAG00000007970	XRN2	100	67.576	ENSTRUG00000015489	xrn2	100	67.947	Takifugu_rubripes
ENSFCAG00000007970	XRN2	100	70.924	ENSTNIG00000010712	xrn2	100	70.924	Tetraodon_nigroviridis
ENSFCAG00000007970	XRN2	100	97.158	ENSTBEG00000004119	XRN2	100	97.158	Tupaia_belangeri
ENSFCAG00000007970	XRN2	97	98.198	ENSTTRG00000009087	XRN2	93	98.198	Tursiops_truncatus
ENSFCAG00000007970	XRN2	100	99.368	ENSUAMG00000024634	XRN2	100	99.368	Ursus_americanus
ENSFCAG00000007970	XRN2	97	99.135	ENSUMAG00000004012	XRN2	95	99.135	Ursus_maritimus
ENSFCAG00000007970	XRN2	89	90.178	ENSVPAG00000010694	XRN2	91	90.178	Vicugna_pacos
ENSFCAG00000007970	XRN2	100	99.263	ENSVVUG00000012178	XRN2	100	99.263	Vulpes_vulpes
ENSFCAG00000007970	XRN2	100	74.348	ENSXETG00000023501	xrn2	100	74.974	Xenopus_tropicalis
ENSFCAG00000007970	XRN2	100	68.140	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus