EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000008289 (Gene tree)
Gene ID: 101099624
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 427691 bases
Position: chrA2:146001824-146429514
Accession: 101099624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000007685	TUDOR	PF00567.24	1.4e-27	1	1
ENSFCAP00000029235	TUDOR	PF00567.24	1.3e-20	1	1
ENSFCAP00000029235	SNase	PF00565.17	1.2e-69	1	5
ENSFCAP00000029235	SNase	PF00565.17	1.2e-69	2	5
ENSFCAP00000029235	SNase	PF00565.17	1.2e-69	3	5
ENSFCAP00000029235	SNase	PF00565.17	1.2e-69	4	5
ENSFCAP00000029235	SNase	PF00565.17	1.2e-69	5	5
ENSFCAP00000007685	SNase	PF00565.17	1.5e-69	1	5
ENSFCAP00000007685	SNase	PF00565.17	1.5e-69	2	5
ENSFCAP00000007685	SNase	PF00565.17	1.5e-69	3	5
ENSFCAP00000007685	SNase	PF00565.17	1.5e-69	4	5
ENSFCAP00000007685	SNase	PF00565.17	1.5e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000038715	SND1-202	5333	-	ENSFCAP00000029235	879 (aa)	-	A0A2I2UA05
ENSFCAT00000008291	SND1-201	5426	XM_011280535	ENSFCAP00000007685	910 (aa)	XP_011278837	M3W9B3

Gene Model

Click here to download ENSFCAG00000008289's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000008289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000008289	SND1	100	99.011	ENSG00000197157	SND1	100	99.011	Homo_sapiens
ENSFCAG00000008289	SND1	100	83.882	ENSAPOG00000017599	snd1	100	83.882	Acanthochromis_polyacanthus
ENSFCAG00000008289	SND1	100	99.123	ENSAMEG00000004664	SND1	94	99.123	Ailuropoda_melanoleuca
ENSFCAG00000008289	SND1	98	82.083	ENSACIG00000003551	snd1	100	81.120	Amphilophus_citrinellus
ENSFCAG00000008289	SND1	100	83.662	ENSAOCG00000014166	snd1	100	83.662	Amphiprion_ocellaris
ENSFCAG00000008289	SND1	100	83.662	ENSAPEG00000007067	snd1	100	83.662	Amphiprion_percula
ENSFCAG00000008289	SND1	98	83.017	ENSATEG00000018475	snd1	89	83.017	Anabas_testudineus
ENSFCAG00000008289	SND1	100	99.231	ENSANAG00000034463	SND1	100	99.231	Aotus_nancymaae
ENSFCAG00000008289	SND1	100	83.333	ENSACLG00000022897	snd1	100	83.333	Astatotilapia_calliptera
ENSFCAG00000008289	SND1	99	84.598	ENSAMXG00000016318	snd1	99	84.598	Astyanax_mexicanus
ENSFCAG00000008289	SND1	100	98.791	ENSBTAG00000010692	SND1	100	98.791	Bos_taurus
ENSFCAG00000008289	SND1	98	46.981	WBGene00006626	tsn-1	98	47.420	Caenorhabditis_elegans
ENSFCAG00000008289	SND1	100	99.011	ENSCJAG00000017668	SND1	100	99.011	Callithrix_jacchus
ENSFCAG00000008289	SND1	100	99.451	ENSCAFG00000001700	SND1	100	99.451	Canis_familiaris
ENSFCAG00000008289	SND1	100	99.451	ENSCAFG00020021639	SND1	100	99.451	Canis_lupus_dingo
ENSFCAG00000008289	SND1	100	99.121	ENSCHIG00000023390	SND1	100	99.121	Capra_hircus
ENSFCAG00000008289	SND1	75	99.472	ENSTSYG00000004979	SND1	96	99.472	Carlito_syrichta
ENSFCAG00000008289	SND1	99	86.766	ENSCAPG00000010677	SND1	98	86.766	Cavia_aperea
ENSFCAG00000008289	SND1	100	98.022	ENSCPOG00000006251	SND1	100	98.022	Cavia_porcellus
ENSFCAG00000008289	SND1	100	99.341	ENSCCAG00000036847	SND1	100	99.341	Cebus_capucinus
ENSFCAG00000008289	SND1	100	99.231	ENSCATG00000035214	SND1	100	99.231	Cercocebus_atys
ENSFCAG00000008289	SND1	100	98.242	ENSCLAG00000011796	SND1	100	98.242	Chinchilla_lanigera
ENSFCAG00000008289	SND1	100	99.231	ENSCSAG00000010182	SND1	100	99.231	Chlorocebus_sabaeus
ENSFCAG00000008289	SND1	80	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSFCAG00000008289	SND1	100	92.308	ENSCPBG00000018094	SND1	100	92.308	Chrysemys_picta_bellii
ENSFCAG00000008289	SND1	98	57.143	ENSCING00000000524	-	99	56.460	Ciona_intestinalis
ENSFCAG00000008289	SND1	99	58.015	ENSCSAVG00000008807	-	99	58.015	Ciona_savignyi
ENSFCAG00000008289	SND1	100	99.231	ENSCANG00000035119	SND1	100	99.231	Colobus_angolensis_palliatus
ENSFCAG00000008289	SND1	100	97.253	ENSCGRG00001022514	Snd1	100	97.253	Cricetulus_griseus_chok1gshd
ENSFCAG00000008289	SND1	97	97.398	ENSCGRG00000012277	Snd1	99	97.398	Cricetulus_griseus_crigri
ENSFCAG00000008289	SND1	100	82.895	ENSCSEG00000008661	snd1	99	82.895	Cynoglossus_semilaevis
ENSFCAG00000008289	SND1	100	83.991	ENSCVAG00000010316	snd1	100	83.678	Cyprinodon_variegatus
ENSFCAG00000008289	SND1	100	84.556	ENSDARG00000006766	snd1	99	86.140	Danio_rerio
ENSFCAG00000008289	SND1	97	96.280	ENSDNOG00000006795	SND1	100	96.280	Dasypus_novemcinctus
ENSFCAG00000008289	SND1	100	98.681	ENSDORG00000000336	Snd1	100	98.681	Dipodomys_ordii
ENSFCAG00000008289	SND1	98	50.703	FBgn0035121	Tudor-SN	99	50.212	Drosophila_melanogaster
ENSFCAG00000008289	SND1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSFCAG00000008289	SND1	62	67.568	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSFCAG00000008289	SND1	100	97.624	ENSEASG00005008513	SND1	100	97.624	Equus_asinus_asinus
ENSFCAG00000008289	SND1	100	99.231	ENSECAG00000011451	SND1	100	99.231	Equus_caballus
ENSFCAG00000008289	SND1	100	86.923	ENSEEUG00000014737	SND1	100	86.923	Erinaceus_europaeus
ENSFCAG00000008289	SND1	99	82.237	ENSELUG00000001805	snd1	96	82.237	Esox_lucius
ENSFCAG00000008289	SND1	100	98.352	ENSFDAG00000015881	SND1	100	98.352	Fukomys_damarensis
ENSFCAG00000008289	SND1	99	82.093	ENSFHEG00000004093	snd1	99	83.812	Fundulus_heteroclitus
ENSFCAG00000008289	SND1	64	74.294	ENSGMOG00000018932	snd1	66	74.294	Gadus_morhua
ENSFCAG00000008289	SND1	100	84.320	ENSGAFG00000008421	snd1	100	84.320	Gambusia_affinis
ENSFCAG00000008289	SND1	100	53.963	ENSGACG00000019793	snd1	100	53.963	Gasterosteus_aculeatus
ENSFCAG00000008289	SND1	100	99.231	ENSGGOG00000009614	SND1	100	99.231	Gorilla_gorilla
ENSFCAG00000008289	SND1	99	83.370	ENSHBUG00000019135	snd1	99	83.370	Haplochromis_burtoni
ENSFCAG00000008289	SND1	100	98.022	ENSHGLG00000003618	SND1	100	98.022	Heterocephalus_glaber_female
ENSFCAG00000008289	SND1	99	97.569	ENSHGLG00100012449	SND1	100	97.569	Heterocephalus_glaber_male
ENSFCAG00000008289	SND1	100	82.785	ENSHCOG00000005266	snd1	100	82.785	Hippocampus_comes
ENSFCAG00000008289	SND1	100	83.042	ENSIPUG00000013279	snd1	100	83.042	Ictalurus_punctatus
ENSFCAG00000008289	SND1	100	98.681	ENSSTOG00000002140	SND1	100	98.681	Ictidomys_tridecemlineatus
ENSFCAG00000008289	SND1	100	98.901	ENSJJAG00000009561	Snd1	100	98.901	Jaculus_jaculus
ENSFCAG00000008289	SND1	100	84.101	ENSKMAG00000016997	snd1	100	84.101	Kryptolebias_marmoratus
ENSFCAG00000008289	SND1	100	84.899	ENSLBEG00000013563	snd1	100	82.566	Labrus_bergylta
ENSFCAG00000008289	SND1	99	85.447	ENSLOCG00000015537	snd1	100	84.691	Lepisosteus_oculatus
ENSFCAG00000008289	SND1	100	98.242	ENSLAFG00000009696	SND1	100	98.242	Loxodonta_africana
ENSFCAG00000008289	SND1	100	99.231	ENSMFAG00000038114	SND1	100	99.231	Macaca_fascicularis
ENSFCAG00000008289	SND1	100	99.231	ENSMMUG00000015432	SND1	100	99.231	Macaca_mulatta
ENSFCAG00000008289	SND1	100	99.231	ENSMNEG00000039808	SND1	100	99.322	Macaca_nemestrina
ENSFCAG00000008289	SND1	100	99.121	ENSMLEG00000029040	SND1	100	99.209	Mandrillus_leucophaeus
ENSFCAG00000008289	SND1	100	83.443	ENSMAMG00000011739	snd1	100	83.443	Mastacembelus_armatus
ENSFCAG00000008289	SND1	100	83.333	ENSMZEG00005005681	snd1	100	83.333	Maylandia_zebra
ENSFCAG00000008289	SND1	100	99.011	ENSMICG00000000097	SND1	100	99.011	Microcebus_murinus
ENSFCAG00000008289	SND1	100	98.132	ENSMOCG00000005040	Snd1	100	98.132	Microtus_ochrogaster
ENSFCAG00000008289	SND1	100	83.443	ENSMMOG00000001795	snd1	100	83.443	Mola_mola
ENSFCAG00000008289	SND1	99	95.987	ENSMODG00000015182	SND1	100	95.934	Monodelphis_domestica
ENSFCAG00000008289	SND1	100	83.333	ENSMALG00000012071	snd1	100	83.333	Monopterus_albus
ENSFCAG00000008289	SND1	100	97.692	MGP_CAROLIEiJ_G0028159	Snd1	100	97.692	Mus_caroli
ENSFCAG00000008289	SND1	100	97.473	ENSMUSG00000001424	Snd1	100	97.473	Mus_musculus
ENSFCAG00000008289	SND1	100	97.692	MGP_PahariEiJ_G0021917	Snd1	100	98.314	Mus_pahari
ENSFCAG00000008289	SND1	100	97.692	MGP_SPRETEiJ_G0029159	Snd1	100	97.692	Mus_spretus
ENSFCAG00000008289	SND1	100	98.901	ENSMPUG00000006545	SND1	100	98.901	Mustela_putorius_furo
ENSFCAG00000008289	SND1	97	97.430	ENSMLUG00000017130	SND1	99	97.430	Myotis_lucifugus
ENSFCAG00000008289	SND1	100	98.022	ENSNGAG00000011186	Snd1	100	98.022	Nannospalax_galili
ENSFCAG00000008289	SND1	100	83.224	ENSNBRG00000006681	snd1	100	83.224	Neolamprologus_brichardi
ENSFCAG00000008289	SND1	100	99.121	ENSNLEG00000012263	SND1	100	99.322	Nomascus_leucogenys
ENSFCAG00000008289	SND1	91	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSFCAG00000008289	SND1	100	98.462	ENSODEG00000011502	SND1	100	98.462	Octodon_degus
ENSFCAG00000008289	SND1	100	83.224	ENSONIG00000011481	snd1	97	83.224	Oreochromis_niloticus
ENSFCAG00000008289	SND1	98	94.707	ENSOANG00000000817	SND1	99	93.502	Ornithorhynchus_anatinus
ENSFCAG00000008289	SND1	100	97.582	ENSOCUG00000001620	SND1	100	97.582	Oryctolagus_cuniculus
ENSFCAG00000008289	SND1	98	83.911	ENSORLG00000015201	snd1	100	82.895	Oryzias_latipes
ENSFCAG00000008289	SND1	98	84.022	ENSORLG00020013991	snd1	100	83.004	Oryzias_latipes_hni
ENSFCAG00000008289	SND1	98	84.022	ENSORLG00015012436	snd1	100	83.004	Oryzias_latipes_hsok
ENSFCAG00000008289	SND1	100	83.114	ENSOMEG00000006406	snd1	99	83.114	Oryzias_melastigma
ENSFCAG00000008289	SND1	100	98.794	ENSOGAG00000013356	SND1	94	98.794	Otolemur_garnettii
ENSFCAG00000008289	SND1	97	96.271	ENSOARG00000002149	SND1	100	96.271	Ovis_aries
ENSFCAG00000008289	SND1	100	99.121	ENSPPAG00000042947	SND1	100	99.121	Pan_paniscus
ENSFCAG00000008289	SND1	100	100.000	ENSPPRG00000004494	SND1	100	100.000	Panthera_pardus
ENSFCAG00000008289	SND1	100	99.890	ENSPTIG00000014214	SND1	100	99.890	Panthera_tigris_altaica
ENSFCAG00000008289	SND1	100	99.121	ENSPTRG00000023911	SND1	100	99.121	Pan_troglodytes
ENSFCAG00000008289	SND1	100	99.317	ENSPANG00000011997	SND1	100	99.317	Papio_anubis
ENSFCAG00000008289	SND1	99	81.588	ENSPKIG00000023494	snd1	100	80.849	Paramormyrops_kingsleyae
ENSFCAG00000008289	SND1	92	82.994	ENSPMGG00000003629	snd1	100	82.994	Periophthalmus_magnuspinnatus
ENSFCAG00000008289	SND1	100	98.022	ENSPEMG00000010240	Snd1	100	98.022	Peromyscus_maniculatus_bairdii
ENSFCAG00000008289	SND1	97	73.559	ENSPMAG00000007915	-	99	73.559	Petromyzon_marinus
ENSFCAG00000008289	SND1	100	96.374	ENSPCIG00000011561	SND1	100	96.374	Phascolarctos_cinereus
ENSFCAG00000008289	SND1	100	83.772	ENSPFOG00000001557	snd1	100	83.772	Poecilia_formosa
ENSFCAG00000008289	SND1	100	83.772	ENSPLAG00000018459	snd1	97	83.772	Poecilia_latipinna
ENSFCAG00000008289	SND1	100	84.211	ENSPMEG00000006803	snd1	100	84.211	Poecilia_mexicana
ENSFCAG00000008289	SND1	100	84.101	ENSPREG00000002189	snd1	100	84.101	Poecilia_reticulata
ENSFCAG00000008289	SND1	93	99.007	ENSPPYG00000017972	SND1	100	99.007	Pongo_abelii
ENSFCAG00000008289	SND1	100	86.593	ENSPCAG00000011305	SND1	100	86.593	Procavia_capensis
ENSFCAG00000008289	SND1	100	99.011	ENSPCOG00000026791	SND1	100	99.096	Propithecus_coquereli
ENSFCAG00000008289	SND1	100	97.143	ENSPVAG00000013945	SND1	100	97.143	Pteropus_vampyrus
ENSFCAG00000008289	SND1	100	83.333	ENSPNYG00000000932	snd1	100	83.333	Pundamilia_nyererei
ENSFCAG00000008289	SND1	100	83.807	ENSPNAG00000001206	snd1	100	83.807	Pygocentrus_nattereri
ENSFCAG00000008289	SND1	99	97.357	ENSRNOG00000031173	Snd1	99	97.357	Rattus_norvegicus
ENSFCAG00000008289	SND1	75	99.810	ENSRBIG00000027782	-	93	99.810	Rhinopithecus_bieti
ENSFCAG00000008289	SND1	100	99.231	ENSRROG00000033020	SND1	100	99.231	Rhinopithecus_roxellana
ENSFCAG00000008289	SND1	100	99.231	ENSSBOG00000032461	SND1	100	99.231	Saimiri_boliviensis_boliviensis
ENSFCAG00000008289	SND1	98	93.018	ENSSHAG00000015359	SND1	100	93.018	Sarcophilus_harrisii
ENSFCAG00000008289	SND1	100	82.372	ENSSFOG00015001103	snd1	100	82.372	Scleropages_formosus
ENSFCAG00000008289	SND1	98	83.669	ENSSMAG00000001932	snd1	95	82.566	Scophthalmus_maximus
ENSFCAG00000008289	SND1	100	83.662	ENSSDUG00000002699	snd1	94	83.662	Seriola_dumerili
ENSFCAG00000008289	SND1	100	76.425	ENSSLDG00000001950	snd1	100	76.425	Seriola_lalandi_dorsalis
ENSFCAG00000008289	SND1	87	99.057	ENSSARG00000004877	SND1	92	99.057	Sorex_araneus
ENSFCAG00000008289	SND1	75	87.826	ENSSPUG00000017586	SND1	96	87.826	Sphenodon_punctatus
ENSFCAG00000008289	SND1	78	85.110	ENSSPAG00000021398	snd1	99	85.110	Stegastes_partitus
ENSFCAG00000008289	SND1	100	99.011	ENSSSCG00000016590	SND1	100	99.011	Sus_scrofa
ENSFCAG00000008289	SND1	100	82.675	ENSTRUG00000014067	snd1	100	82.675	Takifugu_rubripes
ENSFCAG00000008289	SND1	100	83.443	ENSTNIG00000011019	snd1	98	85.762	Tetraodon_nigroviridis
ENSFCAG00000008289	SND1	93	93.278	ENSTBEG00000003999	SND1	100	93.278	Tupaia_belangeri
ENSFCAG00000008289	SND1	100	94.396	ENSTTRG00000006059	SND1	100	94.396	Tursiops_truncatus
ENSFCAG00000008289	SND1	91	99.240	ENSUAMG00000005604	-	93	99.240	Ursus_americanus
ENSFCAG00000008289	SND1	73	90.649	ENSUAMG00000002820	-	90	90.649	Ursus_americanus
ENSFCAG00000008289	SND1	100	99.341	ENSUMAG00000005960	SND1	100	99.341	Ursus_maritimus
ENSFCAG00000008289	SND1	80	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSFCAG00000008289	SND1	100	99.231	ENSVVUG00000007226	SND1	100	99.231	Vulpes_vulpes
ENSFCAG00000008289	SND1	97	84.746	ENSXETG00000023043	snd1	100	84.668	Xenopus_tropicalis
ENSFCAG00000008289	SND1	92	81.591	ENSXCOG00000013629	snd1	99	81.591	Xiphophorus_couchianus
ENSFCAG00000008289	SND1	100	84.320	ENSXMAG00000011469	snd1	100	84.320	Xiphophorus_maculatus