EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000008966 (Gene tree)
Gene ID: 101087313
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 75316 bases
Position: chrA3:103123020-103198335
Accession: 101087313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000008311	RNA_pol_Rpb1_5	PF04998.17	6.6e-104	1	1
ENSFCAP00000008311	RNA_pol_Rpb1_4	PF05000.17	5.6e-25	1	1
ENSFCAP00000008311	RNA_pol_Rpb1_2	PF00623.20	3.3e-70	1	1
ENSFCAP00000008311	RNA_pol_Rpb1_3	PF04983.18	5.4e-37	1	1
ENSFCAP00000008311	RNA_pol_Rpb1_1	PF04997.12	2.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000008968	POLR1A-201	6151	XM_023251840	ENSFCAP00000008311	1718 (aa)	XP_023107608	M3WAJ5

Gene Model

Click here to download ENSFCAG00000008966's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000008966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000008966	POLR1A	55	37.584	ENSFCAG00000000843	POLR3A	65	37.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000008966	POLR1A	100	91.570	ENSG00000068654	POLR1A	100	91.919	Homo_sapiens
ENSFCAG00000008966	POLR1A	69	68.182	ENSAPOG00000017945	polr1a	99	68.182	Acanthochromis_polyacanthus
ENSFCAG00000008966	POLR1A	100	94.878	ENSAMEG00000005807	POLR1A	100	96.004	Ailuropoda_melanoleuca
ENSFCAG00000008966	POLR1A	100	63.573	ENSACIG00000022147	polr1a	100	63.051	Amphilophus_citrinellus
ENSFCAG00000008966	POLR1A	100	66.415	ENSAOCG00000017336	polr1a	100	68.547	Amphiprion_ocellaris
ENSFCAG00000008966	POLR1A	100	66.357	ENSAPEG00000016105	polr1a	100	66.241	Amphiprion_percula
ENSFCAG00000008966	POLR1A	100	66.590	ENSATEG00000016773	polr1a	100	66.320	Anabas_testudineus
ENSFCAG00000008966	POLR1A	86	73.288	ENSAPLG00000013871	POLR1A	99	72.346	Anas_platyrhynchos
ENSFCAG00000008966	POLR1A	99	69.636	ENSACAG00000012141	POLR1A	99	69.231	Anolis_carolinensis
ENSFCAG00000008966	POLR1A	100	90.518	ENSANAG00000033927	POLR1A	100	90.809	Aotus_nancymaae
ENSFCAG00000008966	POLR1A	100	62.703	ENSACLG00000020541	polr1a	100	61.828	Astatotilapia_calliptera
ENSFCAG00000008966	POLR1A	100	91.444	ENSBTAG00000006481	POLR1A	100	91.512	Bos_taurus
ENSFCAG00000008966	POLR1A	97	40.080	WBGene00012999	rpoa-1	98	38.063	Caenorhabditis_elegans
ENSFCAG00000008966	POLR1A	100	90.000	ENSCJAG00000019547	POLR1A	100	90.174	Callithrix_jacchus
ENSFCAG00000008966	POLR1A	100	95.111	ENSCAFG00000007613	POLR1A	100	95.111	Canis_familiaris
ENSFCAG00000008966	POLR1A	100	94.893	ENSCAFG00020014752	POLR1A	100	94.893	Canis_lupus_dingo
ENSFCAG00000008966	POLR1A	100	89.907	ENSCHIG00000018204	POLR1A	100	89.791	Capra_hircus
ENSFCAG00000008966	POLR1A	100	88.307	ENSTSYG00000002761	POLR1A	100	88.249	Carlito_syrichta
ENSFCAG00000008966	POLR1A	97	84.597	ENSCAPG00000010132	POLR1A	100	84.450	Cavia_aperea
ENSFCAG00000008966	POLR1A	100	89.070	ENSCPOG00000012350	POLR1A	100	89.070	Cavia_porcellus
ENSFCAG00000008966	POLR1A	100	90.465	ENSCCAG00000019839	POLR1A	100	90.581	Cebus_capucinus
ENSFCAG00000008966	POLR1A	100	91.686	ENSCATG00000029786	POLR1A	100	91.860	Cercocebus_atys
ENSFCAG00000008966	POLR1A	100	89.037	ENSCLAG00000005187	POLR1A	100	89.037	Chinchilla_lanigera
ENSFCAG00000008966	POLR1A	100	91.686	ENSCSAG00000016251	POLR1A	100	91.860	Chlorocebus_sabaeus
ENSFCAG00000008966	POLR1A	99	75.044	ENSCPBG00000001115	POLR1A	99	74.811	Chrysemys_picta_bellii
ENSFCAG00000008966	POLR1A	99	46.942	ENSCSAVG00000007184	-	91	55.211	Ciona_savignyi
ENSFCAG00000008966	POLR1A	100	88.844	ENSCANG00000031785	POLR1A	100	88.844	Colobus_angolensis_palliatus
ENSFCAG00000008966	POLR1A	100	82.783	ENSCGRG00001006651	Polr1a	100	83.072	Cricetulus_griseus_chok1gshd
ENSFCAG00000008966	POLR1A	60	86.240	ENSCGRG00000010834	Polr1a	100	86.919	Cricetulus_griseus_crigri
ENSFCAG00000008966	POLR1A	100	62.195	ENSCSEG00000020190	polr1a	100	62.311	Cynoglossus_semilaevis
ENSFCAG00000008966	POLR1A	100	64.167	ENSCVAG00000020941	polr1a	100	64.948	Cyprinodon_variegatus
ENSFCAG00000008966	POLR1A	100	67.499	ENSDARG00000098375	polr1a	100	66.802	Danio_rerio
ENSFCAG00000008966	POLR1A	100	83.401	ENSDNOG00000010829	POLR1A	100	83.401	Dasypus_novemcinctus
ENSFCAG00000008966	POLR1A	100	88.303	ENSDORG00000008298	Polr1a	100	87.905	Dipodomys_ordii
ENSFCAG00000008966	POLR1A	79	44.956	FBgn0019938	RpI1	99	43.790	Drosophila_melanogaster
ENSFCAG00000008966	POLR1A	72	93.750	ENSETEG00000000412	-	72	93.750	Echinops_telfairi
ENSFCAG00000008966	POLR1A	88	65.891	ENSEBUG00000005667	-	99	48.444	Eptatretus_burgeri
ENSFCAG00000008966	POLR1A	100	94.186	ENSEASG00005001625	POLR1A	100	94.360	Equus_asinus_asinus
ENSFCAG00000008966	POLR1A	100	94.186	ENSECAG00000030510	-	100	96.258	Equus_caballus
ENSFCAG00000008966	POLR1A	100	94.186	ENSECAG00000036306	-	100	96.258	Equus_caballus
ENSFCAG00000008966	POLR1A	100	94.186	ENSECAG00000010092	POLR1A	100	96.258	Equus_caballus
ENSFCAG00000008966	POLR1A	85	94.541	ENSEEUG00000000676	POLR1A	85	94.541	Erinaceus_europaeus
ENSFCAG00000008966	POLR1A	100	67.130	ENSELUG00000012769	polr1a	99	67.188	Esox_lucius
ENSFCAG00000008966	POLR1A	99	71.873	ENSFALG00000010082	POLR1A	99	71.228	Ficedula_albicollis
ENSFCAG00000008966	POLR1A	100	88.727	ENSFDAG00000013726	POLR1A	100	88.553	Fukomys_damarensis
ENSFCAG00000008966	POLR1A	100	62.065	ENSFHEG00000005996	polr1a	100	62.087	Fundulus_heteroclitus
ENSFCAG00000008966	POLR1A	100	60.442	ENSGMOG00000002230	polr1a	100	60.151	Gadus_morhua
ENSFCAG00000008966	POLR1A	90	70.161	ENSGALG00000038160	-	99	70.289	Gallus_gallus
ENSFCAG00000008966	POLR1A	100	64.662	ENSGAFG00000015266	polr1a	100	63.940	Gambusia_affinis
ENSFCAG00000008966	POLR1A	100	65.225	ENSGACG00000018791	polr1a	100	64.821	Gasterosteus_aculeatus
ENSFCAG00000008966	POLR1A	89	76.055	ENSGAGG00000004984	-	96	81.542	Gopherus_agassizii
ENSFCAG00000008966	POLR1A	100	91.395	ENSGGOG00000001788	POLR1A	100	91.744	Gorilla_gorilla
ENSFCAG00000008966	POLR1A	90	64.785	ENSHBUG00000020021	polr1a	100	64.785	Haplochromis_burtoni
ENSFCAG00000008966	POLR1A	100	89.419	ENSHGLG00000006334	POLR1A	100	89.419	Heterocephalus_glaber_female
ENSFCAG00000008966	POLR1A	100	89.159	ENSHGLG00100006614	POLR1A	100	89.159	Heterocephalus_glaber_male
ENSFCAG00000008966	POLR1A	100	62.091	ENSHCOG00000003345	polr1a	100	62.053	Hippocampus_comes
ENSFCAG00000008966	POLR1A	100	66.242	ENSIPUG00000013174	polr1a	100	65.587	Ictalurus_punctatus
ENSFCAG00000008966	POLR1A	100	87.442	ENSSTOG00000012580	POLR1A	100	87.442	Ictidomys_tridecemlineatus
ENSFCAG00000008966	POLR1A	100	87.812	ENSJJAG00000013113	Polr1a	100	87.812	Jaculus_jaculus
ENSFCAG00000008966	POLR1A	100	65.465	ENSKMAG00000007399	polr1a	100	65.116	Kryptolebias_marmoratus
ENSFCAG00000008966	POLR1A	95	68.724	ENSLBEG00000015401	polr1a	99	68.724	Labrus_bergylta
ENSFCAG00000008966	POLR1A	53	76.413	ENSLACG00000003218	polr1a	100	76.413	Latimeria_chalumnae
ENSFCAG00000008966	POLR1A	100	70.718	ENSLOCG00000010881	polr1a	100	70.428	Lepisosteus_oculatus
ENSFCAG00000008966	POLR1A	100	90.493	ENSLAFG00000014948	POLR1A	100	90.683	Loxodonta_africana
ENSFCAG00000008966	POLR1A	100	91.686	ENSMFAG00000046097	POLR1A	100	91.860	Macaca_fascicularis
ENSFCAG00000008966	POLR1A	100	91.570	ENSMMUG00000015815	POLR1A	100	91.744	Macaca_mulatta
ENSFCAG00000008966	POLR1A	100	91.686	ENSMNEG00000043313	POLR1A	100	91.860	Macaca_nemestrina
ENSFCAG00000008966	POLR1A	100	91.105	ENSMLEG00000042428	POLR1A	100	91.279	Mandrillus_leucophaeus
ENSFCAG00000008966	POLR1A	100	66.996	ENSMAMG00000016565	polr1a	100	66.222	Mastacembelus_armatus
ENSFCAG00000008966	POLR1A	100	66.125	ENSMZEG00005004915	polr1a	100	65.356	Maylandia_zebra
ENSFCAG00000008966	POLR1A	99	69.454	ENSMGAG00000013111	POLR1A	99	69.570	Meleagris_gallopavo
ENSFCAG00000008966	POLR1A	92	87.492	ENSMAUG00000008497	Polr1a	100	87.745	Mesocricetus_auratus
ENSFCAG00000008966	POLR1A	100	91.923	ENSMICG00000000757	POLR1A	100	91.807	Microcebus_murinus
ENSFCAG00000008966	POLR1A	100	87.652	ENSMOCG00000000122	Polr1a	100	87.594	Microtus_ochrogaster
ENSFCAG00000008966	POLR1A	100	65.411	ENSMMOG00000010216	polr1a	100	65.313	Mola_mola
ENSFCAG00000008966	POLR1A	100	75.086	ENSMODG00000009335	POLR1A	100	74.914	Monodelphis_domestica
ENSFCAG00000008966	POLR1A	100	65.719	ENSMALG00000013363	polr1a	100	65.549	Monopterus_albus
ENSFCAG00000008966	POLR1A	100	86.261	MGP_CAROLIEiJ_G0028494	Polr1a	100	86.087	Mus_caroli
ENSFCAG00000008966	POLR1A	100	86.319	ENSMUSG00000049553	Polr1a	100	86.145	Mus_musculus
ENSFCAG00000008966	POLR1A	100	86.841	MGP_PahariEiJ_G0022230	Polr1a	100	86.667	Mus_pahari
ENSFCAG00000008966	POLR1A	100	84.738	MGP_SPRETEiJ_G0029499	Polr1a	100	84.826	Mus_spretus
ENSFCAG00000008966	POLR1A	100	94.645	ENSMPUG00000009135	POLR1A	100	94.645	Mustela_putorius_furo
ENSFCAG00000008966	POLR1A	100	90.851	ENSMLUG00000015723	POLR1A	100	90.851	Myotis_lucifugus
ENSFCAG00000008966	POLR1A	100	88.123	ENSNGAG00000017907	Polr1a	100	87.775	Nannospalax_galili
ENSFCAG00000008966	POLR1A	100	66.241	ENSNBRG00000000519	polr1a	100	65.933	Neolamprologus_brichardi
ENSFCAG00000008966	POLR1A	100	89.583	ENSNLEG00000002264	POLR1A	100	89.757	Nomascus_leucogenys
ENSFCAG00000008966	POLR1A	75	92.913	ENSMEUG00000011665	-	75	92.913	Notamacropus_eugenii
ENSFCAG00000008966	POLR1A	99	82.901	ENSOPRG00000008269	POLR1A	100	82.637	Ochotona_princeps
ENSFCAG00000008966	POLR1A	100	89.309	ENSODEG00000003542	POLR1A	100	89.425	Octodon_degus
ENSFCAG00000008966	POLR1A	100	66.551	ENSONIG00000015895	polr1a	100	65.761	Oreochromis_niloticus
ENSFCAG00000008966	POLR1A	100	90.180	ENSOCUG00000010138	POLR1A	100	90.122	Oryctolagus_cuniculus
ENSFCAG00000008966	POLR1A	100	64.447	ENSORLG00000008753	polr1a	99	64.385	Oryzias_latipes
ENSFCAG00000008966	POLR1A	100	63.578	ENSORLG00020020726	polr1a	99	63.167	Oryzias_latipes_hni
ENSFCAG00000008966	POLR1A	96	74.468	ENSORLG00015016071	polr1a	99	74.444	Oryzias_latipes_hsok
ENSFCAG00000008966	POLR1A	100	90.523	ENSOGAG00000004031	POLR1A	100	90.465	Otolemur_garnettii
ENSFCAG00000008966	POLR1A	100	91.173	ENSOARG00000020601	POLR1A	100	90.957	Ovis_aries
ENSFCAG00000008966	POLR1A	100	91.453	ENSPPAG00000042450	POLR1A	100	91.802	Pan_paniscus
ENSFCAG00000008966	POLR1A	100	99.418	ENSPPRG00000006702	POLR1A	100	99.418	Panthera_pardus
ENSFCAG00000008966	POLR1A	100	98.840	ENSPTIG00000018783	POLR1A	100	98.840	Panthera_tigris_altaica
ENSFCAG00000008966	POLR1A	100	91.105	ENSPTRG00000012147	POLR1A	100	91.744	Pan_troglodytes
ENSFCAG00000008966	POLR1A	100	91.686	ENSPANG00000025908	POLR1A	100	91.860	Papio_anubis
ENSFCAG00000008966	POLR1A	94	75.694	ENSPKIG00000005468	polr1a	99	75.694	Paramormyrops_kingsleyae
ENSFCAG00000008966	POLR1A	63	72.007	ENSPSIG00000009321	-	99	71.455	Pelodiscus_sinensis
ENSFCAG00000008966	POLR1A	54	68.877	ENSPMGG00000009718	polr1a	95	68.877	Periophthalmus_magnuspinnatus
ENSFCAG00000008966	POLR1A	100	88.000	ENSPEMG00000022224	Polr1a	100	88.000	Peromyscus_maniculatus_bairdii
ENSFCAG00000008966	POLR1A	95	79.562	ENSPCIG00000004222	POLR1A	99	78.941	Phascolarctos_cinereus
ENSFCAG00000008966	POLR1A	100	64.870	ENSPFOG00000005025	polr1a	100	64.187	Poecilia_formosa
ENSFCAG00000008966	POLR1A	100	65.041	ENSPLAG00000021389	polr1a	100	64.604	Poecilia_latipinna
ENSFCAG00000008966	POLR1A	100	62.993	ENSPMEG00000006463	polr1a	100	62.543	Poecilia_mexicana
ENSFCAG00000008966	POLR1A	100	65.081	ENSPREG00000002389	polr1a	100	64.286	Poecilia_reticulata
ENSFCAG00000008966	POLR1A	100	90.814	ENSPPYG00000012217	POLR1A	100	91.163	Pongo_abelii
ENSFCAG00000008966	POLR1A	92	92.000	ENSPCAG00000011582	POLR1A	92	92.000	Procavia_capensis
ENSFCAG00000008966	POLR1A	100	91.749	ENSPCOG00000026987	POLR1A	100	91.691	Propithecus_coquereli
ENSFCAG00000008966	POLR1A	95	92.279	ENSPVAG00000012674	POLR1A	95	91.519	Pteropus_vampyrus
ENSFCAG00000008966	POLR1A	100	66.125	ENSPNYG00000000026	polr1a	100	65.356	Pundamilia_nyererei
ENSFCAG00000008966	POLR1A	100	66.589	ENSPNAG00000019223	polr1a	99	68.288	Pygocentrus_nattereri
ENSFCAG00000008966	POLR1A	100	87.942	ENSRNOG00000009545	Polr1a	100	87.768	Rattus_norvegicus
ENSFCAG00000008966	POLR1A	100	91.047	ENSRBIG00000028335	POLR1A	100	91.221	Rhinopithecus_bieti
ENSFCAG00000008966	POLR1A	100	90.988	ENSRROG00000031473	POLR1A	100	91.163	Rhinopithecus_roxellana
ENSFCAG00000008966	POLR1A	99	36.522	YOR341W	RPA190	99	36.302	Saccharomyces_cerevisiae
ENSFCAG00000008966	POLR1A	100	90.070	ENSSBOG00000030262	POLR1A	100	90.244	Saimiri_boliviensis_boliviensis
ENSFCAG00000008966	POLR1A	100	73.687	ENSSHAG00000014739	POLR1A	100	73.687	Sarcophilus_harrisii
ENSFCAG00000008966	POLR1A	100	67.288	ENSSFOG00015019716	polr1a	100	67.229	Scleropages_formosus
ENSFCAG00000008966	POLR1A	100	66.261	ENSSMAG00000014342	polr1a	100	66.088	Scophthalmus_maximus
ENSFCAG00000008966	POLR1A	100	67.342	ENSSDUG00000014631	polr1a	100	67.516	Seriola_dumerili
ENSFCAG00000008966	POLR1A	100	65.489	ENSSLDG00000024095	polr1a	100	65.663	Seriola_lalandi_dorsalis
ENSFCAG00000008966	POLR1A	75	96.809	ENSSARG00000003136	-	76	96.809	Sorex_araneus
ENSFCAG00000008966	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSFCAG00000008966	POLR1A	65	72.789	ENSSPAG00000016341	polr1a	96	72.789	Stegastes_partitus
ENSFCAG00000008966	POLR1A	83	93.413	ENSSSCG00000008226	POLR1A	99	93.394	Sus_scrofa
ENSFCAG00000008966	POLR1A	99	70.689	ENSTGUG00000010704	POLR1A	100	70.416	Taeniopygia_guttata
ENSFCAG00000008966	POLR1A	100	64.447	ENSTRUG00000002210	polr1a	99	64.074	Takifugu_rubripes
ENSFCAG00000008966	POLR1A	100	60.185	ENSTNIG00000010116	polr1a	100	60.242	Tetraodon_nigroviridis
ENSFCAG00000008966	POLR1A	74	96.460	ENSTBEG00000008646	POLR1A	74	96.460	Tupaia_belangeri
ENSFCAG00000008966	POLR1A	100	88.650	ENSTTRG00000008597	POLR1A	100	88.184	Tursiops_truncatus
ENSFCAG00000008966	POLR1A	69	95.597	ENSUAMG00000012158	-	94	95.597	Ursus_americanus
ENSFCAG00000008966	POLR1A	100	94.645	ENSUMAG00000006700	POLR1A	100	94.645	Ursus_maritimus
ENSFCAG00000008966	POLR1A	100	94.820	ENSVVUG00000001245	POLR1A	100	94.820	Vulpes_vulpes
ENSFCAG00000008966	POLR1A	100	68.203	ENSXETG00000001952	polr1a	100	69.714	Xenopus_tropicalis
ENSFCAG00000008966	POLR1A	100	64.876	ENSXMAG00000004032	polr1a	100	64.529	Xiphophorus_maculatus