EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000010465 (Gene tree)
Gene ID: 101092223
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 2793 bases
Position: chrE2:63029157-63031949
Accession: 101092223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000009714	RRM_1	PF00076.22	3.9e-16	1	1
ENSFCAP00000031906	RRM_1	PF00076.22	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000033951	PABPN1L-201	765	-	ENSFCAP00000031906	254 (aa)	-	A0A2I2UHG5
ENSFCAT00000010468	PABPN1L-202	913	XM_003998332	ENSFCAP00000009714	277 (aa)	XP_003998381	M3WDB4

Gene Model

Click here to download ENSFCAG00000010465's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03015	mRNA surveillance pathway	KEGG
fca05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000010465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000010465	PABPN1L	50	63.380	ENSFCAG00000031922	PABPN1	70	45.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000010465	PABPN1L	100	69.039	ENSG00000205022	PABPN1L	100	70.213	Homo_sapiens
ENSFCAG00000010465	PABPN1L	53	57.895	ENSAPOG00000000685	PABPN1L	50	55.696	Acanthochromis_polyacanthus
ENSFCAG00000010465	PABPN1L	53	57.616	ENSACIG00000021400	PABPN1L	72	60.465	Amphilophus_citrinellus
ENSFCAG00000010465	PABPN1L	59	50.909	ENSAOCG00000019844	PABPN1L	63	52.023	Amphiprion_ocellaris
ENSFCAG00000010465	PABPN1L	59	50.909	ENSAPEG00000019534	PABPN1L	63	52.023	Amphiprion_percula
ENSFCAG00000010465	PABPN1L	70	57.868	ENSACAG00000013250	PABPN1L	99	57.868	Anolis_carolinensis
ENSFCAG00000010465	PABPN1L	100	66.308	ENSANAG00000038178	PABPN1L	100	66.308	Aotus_nancymaae
ENSFCAG00000010465	PABPN1L	73	48.276	ENSACLG00000025147	PABPN1L	62	52.047	Astatotilapia_calliptera
ENSFCAG00000010465	PABPN1L	54	56.667	ENSAMXG00000010873	PABPN1L	66	54.237	Astyanax_mexicanus
ENSFCAG00000010465	PABPN1L	100	74.007	ENSBTAG00000023752	-	100	75.540	Bos_taurus
ENSFCAG00000010465	PABPN1L	51	85.816	ENSBTAG00000006727	-	86	85.816	Bos_taurus
ENSFCAG00000010465	PABPN1L	100	65.233	ENSCJAG00000045284	PABPN1L	100	61.089	Callithrix_jacchus
ENSFCAG00000010465	PABPN1L	99	72.161	ENSCHIG00000013987	PABPN1L	100	68.421	Capra_hircus
ENSFCAG00000010465	PABPN1L	95	64.469	ENSCAPG00000007240	PABPN1L	97	64.773	Cavia_aperea
ENSFCAG00000010465	PABPN1L	100	67.025	ENSCPOG00000025951	PABPN1L	100	67.025	Cavia_porcellus
ENSFCAG00000010465	PABPN1L	100	67.742	ENSCCAG00000027631	PABPN1L	100	70.357	Cebus_capucinus
ENSFCAG00000010465	PABPN1L	100	70.251	ENSCATG00000031060	PABPN1L	100	72.143	Cercocebus_atys
ENSFCAG00000010465	PABPN1L	100	69.176	ENSCLAG00000000704	PABPN1L	100	69.176	Chinchilla_lanigera
ENSFCAG00000010465	PABPN1L	100	67.119	ENSCSAG00000002881	PABPN1L	100	67.905	Chlorocebus_sabaeus
ENSFCAG00000010465	PABPN1L	70	57.360	ENSCPBG00000023441	PABPN1L	61	57.360	Chrysemys_picta_bellii
ENSFCAG00000010465	PABPN1L	100	68.100	ENSCANG00000039336	PABPN1L	100	70.357	Colobus_angolensis_palliatus
ENSFCAG00000010465	PABPN1L	100	67.742	ENSCGRG00001013211	Pabpn1l	100	68.100	Cricetulus_griseus_chok1gshd
ENSFCAG00000010465	PABPN1L	100	67.742	ENSCGRG00000015868	Pabpn1l	100	68.100	Cricetulus_griseus_crigri
ENSFCAG00000010465	PABPN1L	59	52.096	ENSCSEG00000001142	pabpn1l	62	53.179	Cynoglossus_semilaevis
ENSFCAG00000010465	PABPN1L	59	50.909	ENSCVAG00000015547	PABPN1L	63	52.047	Cyprinodon_variegatus
ENSFCAG00000010465	PABPN1L	100	59.075	ENSDNOG00000034677	PABPN1L	100	59.574	Dasypus_novemcinctus
ENSFCAG00000010465	PABPN1L	100	76.534	ENSEASG00005000777	PABPN1L	100	75.812	Equus_asinus_asinus
ENSFCAG00000010465	PABPN1L	100	75.812	ENSECAG00000000378	PABPN1L	100	75.090	Equus_caballus
ENSFCAG00000010465	PABPN1L	100	61.733	ENSEEUG00000004747	PABPN1L	100	61.733	Erinaceus_europaeus
ENSFCAG00000010465	PABPN1L	59	51.829	ENSELUG00000018385	PABPN1L	68	51.630	Esox_lucius
ENSFCAG00000010465	PABPN1L	71	56.853	ENSFALG00000003319	PABPN1L	78	54.592	Ficedula_albicollis
ENSFCAG00000010465	PABPN1L	100	68.817	ENSFDAG00000021067	PABPN1L	100	68.817	Fukomys_damarensis
ENSFCAG00000010465	PABPN1L	59	50.000	ENSFHEG00000018295	PABPN1L	63	51.149	Fundulus_heteroclitus
ENSFCAG00000010465	PABPN1L	56	67.516	ENSGALG00000006242	PABPN1L	89	64.968	Gallus_gallus
ENSFCAG00000010465	PABPN1L	59	51.515	ENSGAFG00000012565	PABPN1L	63	52.632	Gambusia_affinis
ENSFCAG00000010465	PABPN1L	59	50.877	ENSGACG00000015428	PABPN1L	64	52.542	Gasterosteus_aculeatus
ENSFCAG00000010465	PABPN1L	65	59.116	ENSGAGG00000010613	PABPN1L	56	59.302	Gopherus_agassizii
ENSFCAG00000010465	PABPN1L	100	69.892	ENSGGOG00000012670	PABPN1L	100	71.071	Gorilla_gorilla
ENSFCAG00000010465	PABPN1L	73	47.783	ENSHBUG00000002388	PABPN1L	63	52.632	Haplochromis_burtoni
ENSFCAG00000010465	PABPN1L	96	69.288	ENSHGLG00000014207	PABPN1L	96	69.922	Heterocephalus_glaber_female
ENSFCAG00000010465	PABPN1L	96	69.288	ENSHGLG00100005230	PABPN1L	96	69.922	Heterocephalus_glaber_male
ENSFCAG00000010465	PABPN1L	62	49.133	ENSHCOG00000004151	PABPN1L	66	50.838	Hippocampus_comes
ENSFCAG00000010465	PABPN1L	54	55.333	ENSIPUG00000023583	PABPN1L	83	54.118	Ictalurus_punctatus
ENSFCAG00000010465	PABPN1L	100	66.667	ENSSTOG00000020814	PABPN1L	92	68.605	Ictidomys_tridecemlineatus
ENSFCAG00000010465	PABPN1L	100	68.459	ENSJJAG00000006433	Pabpn1l	100	67.025	Jaculus_jaculus
ENSFCAG00000010465	PABPN1L	59	49.080	ENSLBEG00000011647	PABPN1L	60	52.047	Labrus_bergylta
ENSFCAG00000010465	PABPN1L	70	70.000	ENSLAFG00000025902	-	78	69.500	Loxodonta_africana
ENSFCAG00000010465	PABPN1L	100	70.251	ENSMFAG00000002924	PABPN1L	100	72.143	Macaca_fascicularis
ENSFCAG00000010465	PABPN1L	100	69.424	ENSMMUG00000012438	PABPN1L	100	71.326	Macaca_mulatta
ENSFCAG00000010465	PABPN1L	100	70.251	ENSMNEG00000044808	PABPN1L	100	72.143	Macaca_nemestrina
ENSFCAG00000010465	PABPN1L	100	69.892	ENSMLEG00000032667	PABPN1L	100	71.786	Mandrillus_leucophaeus
ENSFCAG00000010465	PABPN1L	73	48.276	ENSMZEG00005002186	PABPN1L	62	52.047	Maylandia_zebra
ENSFCAG00000010465	PABPN1L	100	65.233	ENSMAUG00000014032	Pabpn1l	100	65.233	Mesocricetus_auratus
ENSFCAG00000010465	PABPN1L	100	68.705	ENSMICG00000028179	PABPN1L	100	69.892	Microcebus_murinus
ENSFCAG00000010465	PABPN1L	100	64.875	ENSMOCG00000007955	Pabpn1l	100	64.875	Microtus_ochrogaster
ENSFCAG00000010465	PABPN1L	100	51.254	ENSMODG00000003873	-	100	50.538	Monodelphis_domestica
ENSFCAG00000010465	PABPN1L	61	53.216	ENSMALG00000016926	PABPN1L	65	52.247	Monopterus_albus
ENSFCAG00000010465	PABPN1L	100	63.799	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	63.799	Mus_caroli
ENSFCAG00000010465	PABPN1L	100	63.799	ENSMUSG00000069867	Pabpn1l	100	63.799	Mus_musculus
ENSFCAG00000010465	PABPN1L	100	64.516	MGP_PahariEiJ_G0023268	Pabpn1l	100	64.516	Mus_pahari
ENSFCAG00000010465	PABPN1L	100	62.724	MGP_SPRETEiJ_G0032788	Pabpn1l	100	62.724	Mus_spretus
ENSFCAG00000010465	PABPN1L	96	57.554	ENSMLUG00000003228	PABPN1L	84	61.943	Myotis_lucifugus
ENSFCAG00000010465	PABPN1L	100	67.742	ENSNGAG00000023992	Pabpn1l	100	67.742	Nannospalax_galili
ENSFCAG00000010465	PABPN1L	53	56.667	ENSNBRG00000017078	PABPN1L	63	53.846	Neolamprologus_brichardi
ENSFCAG00000010465	PABPN1L	100	68.571	ENSOPRG00000005597	PABPN1L	100	68.571	Ochotona_princeps
ENSFCAG00000010465	PABPN1L	100	63.699	ENSODEG00000004649	PABPN1L	100	62.329	Octodon_degus
ENSFCAG00000010465	PABPN1L	100	56.475	ENSOANG00000013901	PABPN1L	100	56.835	Ornithorhynchus_anatinus
ENSFCAG00000010465	PABPN1L	73	49.751	ENSORLG00000026560	PABPN1L	62	53.254	Oryzias_latipes
ENSFCAG00000010465	PABPN1L	73	49.751	ENSORLG00020015068	PABPN1L	62	53.254	Oryzias_latipes_hni
ENSFCAG00000010465	PABPN1L	73	49.751	ENSORLG00015000397	PABPN1L	62	53.254	Oryzias_latipes_hsok
ENSFCAG00000010465	PABPN1L	100	70.144	ENSOGAG00000000433	PABPN1L	100	70.144	Otolemur_garnettii
ENSFCAG00000010465	PABPN1L	100	70.530	ENSOARG00000013682	PABPN1L	100	71.617	Ovis_aries
ENSFCAG00000010465	PABPN1L	100	69.751	ENSPPAG00000028866	PABPN1L	100	70.213	Pan_paniscus
ENSFCAG00000010465	PABPN1L	100	96.457	ENSPPRG00000015106	PABPN1L	100	96.457	Panthera_pardus
ENSFCAG00000010465	PABPN1L	93	85.659	ENSPTIG00000015606	PABPN1L	99	85.547	Panthera_tigris_altaica
ENSFCAG00000010465	PABPN1L	100	69.751	ENSPTRG00000031120	PABPN1L	100	70.213	Pan_troglodytes
ENSFCAG00000010465	PABPN1L	100	69.892	ENSPANG00000026039	PABPN1L	100	71.786	Papio_anubis
ENSFCAG00000010465	PABPN1L	70	56.410	ENSPSIG00000003404	PABPN1L	100	56.923	Pelodiscus_sinensis
ENSFCAG00000010465	PABPN1L	100	67.025	ENSPEMG00000016624	Pabpn1l	100	67.025	Peromyscus_maniculatus_bairdii
ENSFCAG00000010465	PABPN1L	52	68.056	ENSPCIG00000007038	-	100	65.972	Phascolarctos_cinereus
ENSFCAG00000010465	PABPN1L	59	51.515	ENSPFOG00000007001	PABPN1L	80	44.175	Poecilia_formosa
ENSFCAG00000010465	PABPN1L	59	51.515	ENSPLAG00000018431	PABPN1L	63	52.632	Poecilia_latipinna
ENSFCAG00000010465	PABPN1L	59	51.515	ENSPMEG00000009108	PABPN1L	63	52.632	Poecilia_mexicana
ENSFCAG00000010465	PABPN1L	100	68.327	ENSPPYG00000007655	PABPN1L	100	70.567	Pongo_abelii
ENSFCAG00000010465	PABPN1L	100	71.942	ENSPCOG00000024077	PABPN1L	100	72.662	Propithecus_coquereli
ENSFCAG00000010465	PABPN1L	100	78.214	ENSPVAG00000002716	PABPN1L	100	78.929	Pteropus_vampyrus
ENSFCAG00000010465	PABPN1L	73	48.276	ENSPNYG00000004803	PABPN1L	62	52.047	Pundamilia_nyererei
ENSFCAG00000010465	PABPN1L	100	64.875	ENSRNOG00000029558	Pabpn1l	100	65.591	Rattus_norvegicus
ENSFCAG00000010465	PABPN1L	100	71.326	ENSRBIG00000030740	PABPN1L	100	73.214	Rhinopithecus_bieti
ENSFCAG00000010465	PABPN1L	100	71.685	ENSRROG00000032240	-	100	71.685	Rhinopithecus_roxellana
ENSFCAG00000010465	PABPN1L	99	70.504	ENSRROG00000035483	-	99	71.583	Rhinopithecus_roxellana
ENSFCAG00000010465	PABPN1L	100	68.100	ENSSBOG00000018410	PABPN1L	100	69.643	Saimiri_boliviensis_boliviensis
ENSFCAG00000010465	PABPN1L	100	52.027	ENSSHAG00000010001	-	100	51.014	Sarcophilus_harrisii
ENSFCAG00000010465	PABPN1L	59	49.704	ENSSMAG00000021348	PABPN1L	61	51.429	Scophthalmus_maximus
ENSFCAG00000010465	PABPN1L	59	50.909	ENSSDUG00000006986	PABPN1L	63	52.047	Seriola_dumerili
ENSFCAG00000010465	PABPN1L	59	51.515	ENSSLDG00000021845	PABPN1L	63	52.632	Seriola_lalandi_dorsalis
ENSFCAG00000010465	PABPN1L	94	52.874	ENSSARG00000005178	-	96	54.251	Sorex_araneus
ENSFCAG00000010465	PABPN1L	70	61.340	ENSSPUG00000007031	PABPN1L	84	59.487	Sphenodon_punctatus
ENSFCAG00000010465	PABPN1L	73	49.261	ENSSPAG00000017978	PABPN1L	63	52.632	Stegastes_partitus
ENSFCAG00000010465	PABPN1L	100	75.177	ENSSSCG00000036367	PABPN1L	100	75.532	Sus_scrofa
ENSFCAG00000010465	PABPN1L	59	51.515	ENSTRUG00000024725	PABPN1L	70	51.462	Takifugu_rubripes
ENSFCAG00000010465	PABPN1L	100	80.505	ENSTTRG00000004691	PABPN1L	100	80.505	Tursiops_truncatus
ENSFCAG00000010465	PABPN1L	55	54.375	ENSXETG00000011258	pabpn1l	79	54.802	Xenopus_tropicalis