EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000010900 (Gene tree)
Gene ID: 101088454
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 92188 bases
Position: chrF1:26756424-26848611
Accession: 101088454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000045636	EST1	PF10374.9	7.7e-25	1	1
ENSFCAP00000010130	EST1	PF10374.9	8.2e-25	1	1
ENSFCAP00000037723	EST1	PF10374.9	8.5e-25	1	1
ENSFCAP00000029094	EST1	PF10374.9	8.7e-25	1	1
ENSFCAP00000041963	EST1	PF10374.9	8.8e-25	1	1
ENSFCAP00000049330	EST1	PF10374.9	2.8e-22	1	1
ENSFCAP00000046478	EST1	PF10374.9	3.6e-22	1	1
ENSFCAP00000046478	EST1_DNA_bind	PF10373.9	1.8e-55	1	1
ENSFCAP00000049330	EST1_DNA_bind	PF10373.9	1.8e-55	1	1
ENSFCAP00000045636	EST1_DNA_bind	PF10373.9	1.8e-55	1	1
ENSFCAP00000010130	EST1_DNA_bind	PF10373.9	2e-55	1	1
ENSFCAP00000037723	EST1_DNA_bind	PF10373.9	2.1e-55	1	1
ENSFCAP00000029094	EST1_DNA_bind	PF10373.9	2.2e-55	1	1
ENSFCAP00000041963	EST1_DNA_bind	PF10373.9	2.2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000040759	SMG7-201	6258	XM_006942748	ENSFCAP00000029094	1168 (aa)	XP_006942810	A0A2I2U9L4
ENSFCAT00000010908	SMG7-202	6108	XM_006942752	ENSFCAP00000010130	1115 (aa)	XP_006942814	M3WE60
ENSFCAT00000032944	SMG7-204	3423	XM_006942749	ENSFCAP00000037723	1140 (aa)	XP_006942811	A0A2I2UYZ3
ENSFCAT00000066295	SMG7-208	219	-	ENSFCAP00000045873	73 (aa)	-	UPI0001D3BD71
ENSFCAT00000050807	SMG7-205	3192	-	ENSFCAP00000045636	1063 (aa)	-	UPI000DE7D92C
ENSFCAT00000050674	SMG7-206	3123	-	ENSFCAP00000046478	1040 (aa)	-	UPI000DE7E165
ENSFCAT00000050172	SMG7-207	3150	XM_023247828	ENSFCAP00000049330	1042 (aa)	XP_023103596	UPI000DE7EC35
ENSFCAT00000066355	SMG7-203	3534	-	ENSFCAP00000041963	1177 (aa)	-	UPI000DE7DC69

Gene Model

Click here to download ENSFCAG00000010900's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000010900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000010900	SMG7	100	97.519	ENSG00000116698	SMG7	99	99.329	Homo_sapiens
ENSFCAG00000010900	SMG7	88	72.163	ENSAPOG00000009611	smg7	95	72.163	Acanthochromis_polyacanthus
ENSFCAG00000010900	SMG7	99	94.052	ENSAMEG00000002357	SMG7	100	94.318	Ailuropoda_melanoleuca
ENSFCAG00000010900	SMG7	99	62.888	ENSACIG00000015152	smg7	100	64.164	Amphilophus_citrinellus
ENSFCAG00000010900	SMG7	99	68.900	ENSAOCG00000013538	smg7	99	65.296	Amphiprion_ocellaris
ENSFCAG00000010900	SMG7	99	69.378	ENSAPEG00000007851	smg7	99	65.242	Amphiprion_percula
ENSFCAG00000010900	SMG7	99	63.527	ENSATEG00000006931	smg7	99	64.048	Anabas_testudineus
ENSFCAG00000010900	SMG7	99	85.596	ENSAPLG00000015811	SMG7	99	86.320	Anas_platyrhynchos
ENSFCAG00000010900	SMG7	100	89.394	ENSACAG00000014989	SMG7	100	84.628	Anolis_carolinensis
ENSFCAG00000010900	SMG7	97	97.583	ENSANAG00000028114	SMG7	100	93.513	Aotus_nancymaae
ENSFCAG00000010900	SMG7	99	71.154	ENSACLG00000022079	smg7	94	71.154	Astatotilapia_calliptera
ENSFCAG00000010900	SMG7	99	68.202	ENSAMXG00000020809	smg7	99	67.308	Astyanax_mexicanus
ENSFCAG00000010900	SMG7	100	97.348	ENSBTAG00000008003	SMG7	99	97.348	Bos_taurus
ENSFCAG00000010900	SMG7	99	97.329	ENSCJAG00000005135	SMG7	100	97.170	Callithrix_jacchus
ENSFCAG00000010900	SMG7	100	98.459	ENSCAFG00000013276	SMG7	99	98.459	Canis_familiaris
ENSFCAG00000010900	SMG7	100	98.459	ENSCAFG00020015475	SMG7	99	98.459	Canis_lupus_dingo
ENSFCAG00000010900	SMG7	99	97.002	ENSCHIG00000018192	SMG7	99	97.087	Capra_hircus
ENSFCAG00000010900	SMG7	100	96.835	ENSTSYG00000002667	SMG7	99	96.835	Carlito_syrichta
ENSFCAG00000010900	SMG7	99	97.253	ENSCPOG00000008906	SMG7	100	97.253	Cavia_porcellus
ENSFCAG00000010900	SMG7	99	93.129	ENSCCAG00000028596	SMG7	100	93.450	Cebus_capucinus
ENSFCAG00000010900	SMG7	100	97.690	ENSCATG00000011063	SMG7	99	97.690	Cercocebus_atys
ENSFCAG00000010900	SMG7	100	97.238	ENSCLAG00000010751	SMG7	100	96.757	Chinchilla_lanigera
ENSFCAG00000010900	SMG7	100	97.519	ENSCSAG00000012654	SMG7	99	97.519	Chlorocebus_sabaeus
ENSFCAG00000010900	SMG7	96	88.061	ENSCHOG00000010522	SMG7	99	86.482	Choloepus_hoffmanni
ENSFCAG00000010900	SMG7	100	89.899	ENSCPBG00000015724	SMG7	100	88.151	Chrysemys_picta_bellii
ENSFCAG00000010900	SMG7	99	93.315	ENSCANG00000015680	SMG7	100	93.624	Colobus_angolensis_palliatus
ENSFCAG00000010900	SMG7	100	95.793	ENSCGRG00001013705	Smg7	100	95.626	Cricetulus_griseus_chok1gshd
ENSFCAG00000010900	SMG7	99	95.675	ENSCGRG00000018401	Smg7	100	95.561	Cricetulus_griseus_crigri
ENSFCAG00000010900	SMG7	98	67.308	ENSCVAG00000011842	smg7	100	63.531	Cyprinodon_variegatus
ENSFCAG00000010900	SMG7	99	66.639	ENSDARG00000060767	smg7	99	65.489	Danio_rerio
ENSFCAG00000010900	SMG7	100	96.433	ENSDORG00000007331	Smg7	100	96.319	Dipodomys_ordii
ENSFCAG00000010900	SMG7	97	95.018	ENSETEG00000002654	SMG7	100	95.109	Echinops_telfairi
ENSFCAG00000010900	SMG7	100	98.504	ENSEASG00005006524	SMG7	100	98.247	Equus_asinus_asinus
ENSFCAG00000010900	SMG7	100	98.504	ENSECAG00000004313	SMG7	100	98.335	Equus_caballus
ENSFCAG00000010900	SMG7	97	96.199	ENSEEUG00000002024	SMG7	99	92.973	Erinaceus_europaeus
ENSFCAG00000010900	SMG7	99	69.340	ENSELUG00000010293	smg7	99	66.576	Esox_lucius
ENSFCAG00000010900	SMG7	98	88.442	ENSFALG00000003047	SMG7	100	83.418	Ficedula_albicollis
ENSFCAG00000010900	SMG7	99	96.313	ENSFDAG00000012121	SMG7	99	96.702	Fukomys_damarensis
ENSFCAG00000010900	SMG7	99	61.691	ENSFHEG00000011073	smg7	99	62.661	Fundulus_heteroclitus
ENSFCAG00000010900	SMG7	96	61.538	ENSGMOG00000004916	smg7	93	68.175	Gadus_morhua
ENSFCAG00000010900	SMG7	99	85.701	ENSGALG00000004667	SMG7	99	86.356	Gallus_gallus
ENSFCAG00000010900	SMG7	99	62.284	ENSGAFG00000019000	smg7	99	62.941	Gambusia_affinis
ENSFCAG00000010900	SMG7	97	65.919	ENSGACG00000001634	smg7	99	64.834	Gasterosteus_aculeatus
ENSFCAG00000010900	SMG7	100	97.519	ENSGGOG00000002342	SMG7	99	97.519	Gorilla_gorilla
ENSFCAG00000010900	SMG7	99	71.154	ENSHBUG00000003726	smg7	97	73.096	Haplochromis_burtoni
ENSFCAG00000010900	SMG7	98	97.059	ENSHGLG00000009353	SMG7	100	96.970	Heterocephalus_glaber_female
ENSFCAG00000010900	SMG7	98	95.276	ENSHGLG00100009637	-	100	95.276	Heterocephalus_glaber_male
ENSFCAG00000010900	SMG7	100	88.957	ENSHGLG00100004878	-	100	88.782	Heterocephalus_glaber_male
ENSFCAG00000010900	SMG7	99	69.802	ENSIPUG00000016997	smg7	99	67.590	Ictalurus_punctatus
ENSFCAG00000010900	SMG7	100	97.814	ENSSTOG00000000401	SMG7	100	97.634	Ictidomys_tridecemlineatus
ENSFCAG00000010900	SMG7	100	95.857	ENSJJAG00000012351	Smg7	100	94.917	Jaculus_jaculus
ENSFCAG00000010900	SMG7	99	59.243	ENSKMAG00000004900	smg7	100	60.847	Kryptolebias_marmoratus
ENSFCAG00000010900	SMG7	99	64.983	ENSLBEG00000002983	smg7	99	64.991	Labrus_bergylta
ENSFCAG00000010900	SMG7	53	64.623	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSFCAG00000010900	SMG7	99	77.889	ENSLACG00000000972	SMG7	99	76.542	Latimeria_chalumnae
ENSFCAG00000010900	SMG7	99	66.971	ENSLOCG00000002010	smg7	93	77.273	Lepisosteus_oculatus
ENSFCAG00000010900	SMG7	99	96.977	ENSLAFG00000008186	SMG7	100	96.867	Loxodonta_africana
ENSFCAG00000010900	SMG7	100	97.634	ENSMFAG00000031653	SMG7	100	97.634	Macaca_fascicularis
ENSFCAG00000010900	SMG7	100	97.690	ENSMMUG00000018458	SMG7	99	97.690	Macaca_mulatta
ENSFCAG00000010900	SMG7	96	96.447	ENSMNEG00000034798	SMG7	100	93.712	Macaca_nemestrina
ENSFCAG00000010900	SMG7	100	97.690	ENSMLEG00000037170	SMG7	99	97.690	Mandrillus_leucophaeus
ENSFCAG00000010900	SMG7	87	64.794	ENSMAMG00000018733	smg7	84	64.955	Mastacembelus_armatus
ENSFCAG00000010900	SMG7	99	71.154	ENSMZEG00005015247	smg7	94	71.154	Maylandia_zebra
ENSFCAG00000010900	SMG7	99	85.569	ENSMGAG00000001561	SMG7	99	86.092	Meleagris_gallopavo
ENSFCAG00000010900	SMG7	100	96.318	ENSMAUG00000019484	Smg7	100	96.231	Mesocricetus_auratus
ENSFCAG00000010900	SMG7	99	97.907	ENSMICG00000007145	SMG7	100	97.909	Microcebus_murinus
ENSFCAG00000010900	SMG7	100	96.087	ENSMOCG00000020748	Smg7	100	96.056	Microtus_ochrogaster
ENSFCAG00000010900	SMG7	99	62.587	ENSMMOG00000001524	smg7	99	63.185	Mola_mola
ENSFCAG00000010900	SMG7	91	89.012	ENSMODG00000007139	SMG7	99	89.048	Monodelphis_domestica
ENSFCAG00000010900	SMG7	99	68.293	ENSMALG00000000061	smg7	94	69.652	Monopterus_albus
ENSFCAG00000010900	SMG7	100	95.968	MGP_CAROLIEiJ_G0014704	Smg7	100	95.968	Mus_caroli
ENSFCAG00000010900	SMG7	100	95.881	ENSMUSG00000042772	Smg7	100	95.706	Mus_musculus
ENSFCAG00000010900	SMG7	100	95.793	MGP_PahariEiJ_G0027940	Smg7	100	95.618	Mus_pahari
ENSFCAG00000010900	SMG7	100	95.968	MGP_SPRETEiJ_G0015511	Smg7	100	95.968	Mus_spretus
ENSFCAG00000010900	SMG7	98	98.704	ENSMPUG00000011732	SMG7	97	98.662	Mustela_putorius_furo
ENSFCAG00000010900	SMG7	99	97.329	ENSMLUG00000015417	SMG7	99	96.999	Myotis_lucifugus
ENSFCAG00000010900	SMG7	99	96.628	ENSNGAG00000009836	Smg7	100	95.993	Nannospalax_galili
ENSFCAG00000010900	SMG7	98	60.459	ENSNBRG00000024343	smg7	98	70.952	Neolamprologus_brichardi
ENSFCAG00000010900	SMG7	100	97.776	ENSNLEG00000018018	SMG7	99	97.776	Nomascus_leucogenys
ENSFCAG00000010900	SMG7	77	85.431	ENSMEUG00000004681	SMG7	77	85.774	Notamacropus_eugenii
ENSFCAG00000010900	SMG7	96	86.250	ENSOPRG00000013942	SMG7	96	85.009	Ochotona_princeps
ENSFCAG00000010900	SMG7	100	97.008	ENSODEG00000010390	SMG7	100	96.757	Octodon_degus
ENSFCAG00000010900	SMG7	99	64.058	ENSONIG00000000277	smg7	99	63.863	Oreochromis_niloticus
ENSFCAG00000010900	SMG7	98	91.617	ENSOANG00000000994	SMG7	100	91.755	Ornithorhynchus_anatinus
ENSFCAG00000010900	SMG7	99	90.941	ENSOCUG00000005887	SMG7	95	89.735	Oryctolagus_cuniculus
ENSFCAG00000010900	SMG7	99	63.022	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSFCAG00000010900	SMG7	99	63.189	ENSORLG00020015779	smg7	99	63.773	Oryzias_latipes_hni
ENSFCAG00000010900	SMG7	99	64.741	ENSORLG00015012289	smg7	99	63.394	Oryzias_latipes_hsok
ENSFCAG00000010900	SMG7	99	63.228	ENSOMEG00000002328	smg7	99	63.591	Oryzias_melastigma
ENSFCAG00000010900	SMG7	97	96.461	ENSOGAG00000003107	SMG7	99	93.926	Otolemur_garnettii
ENSFCAG00000010900	SMG7	100	97.092	ENSOARG00000001352	SMG7	100	96.831	Ovis_aries
ENSFCAG00000010900	SMG7	99	93.408	ENSPPAG00000031619	SMG7	100	93.712	Pan_paniscus
ENSFCAG00000010900	SMG7	100	99.829	ENSPPRG00000011222	SMG7	100	99.829	Panthera_pardus
ENSFCAG00000010900	SMG7	100	99.660	ENSPTIG00000007242	SMG7	100	99.660	Panthera_tigris_altaica
ENSFCAG00000010900	SMG7	97	97.814	ENSPTRG00000001764	SMG7	99	95.474	Pan_troglodytes
ENSFCAG00000010900	SMG7	100	97.690	ENSPANG00000004520	SMG7	99	97.690	Papio_anubis
ENSFCAG00000010900	SMG7	99	64.770	ENSPKIG00000007242	smg7	99	68.317	Paramormyrops_kingsleyae
ENSFCAG00000010900	SMG7	99	90.909	ENSPSIG00000012201	SMG7	99	90.468	Pelodiscus_sinensis
ENSFCAG00000010900	SMG7	73	41.787	ENSPMGG00000021833	smg7	79	71.681	Periophthalmus_magnuspinnatus
ENSFCAG00000010900	SMG7	100	95.004	ENSPEMG00000011315	Smg7	100	94.829	Peromyscus_maniculatus_bairdii
ENSFCAG00000010900	SMG7	100	91.919	ENSPCIG00000003786	SMG7	100	91.919	Phascolarctos_cinereus
ENSFCAG00000010900	SMG7	99	65.865	ENSPFOG00000019219	smg7	99	62.706	Poecilia_formosa
ENSFCAG00000010900	SMG7	99	62.045	ENSPLAG00000001446	smg7	99	62.285	Poecilia_latipinna
ENSFCAG00000010900	SMG7	96	61.146	ENSPMEG00000005218	smg7	99	61.402	Poecilia_mexicana
ENSFCAG00000010900	SMG7	86	61.489	ENSPREG00000019039	smg7	92	60.474	Poecilia_reticulata
ENSFCAG00000010900	SMG7	99	93.500	ENSPPYG00000000427	SMG7	99	93.711	Pongo_abelii
ENSFCAG00000010900	SMG7	95	91.875	ENSPCAG00000008360	SMG7	100	82.872	Procavia_capensis
ENSFCAG00000010900	SMG7	100	97.860	ENSPCOG00000011996	SMG7	99	97.860	Propithecus_coquereli
ENSFCAG00000010900	SMG7	98	86.130	ENSPVAG00000000851	SMG7	99	86.130	Pteropus_vampyrus
ENSFCAG00000010900	SMG7	99	70.531	ENSPNYG00000007643	smg7	94	70.531	Pundamilia_nyererei
ENSFCAG00000010900	SMG7	99	66.555	ENSPNAG00000011374	smg7	98	70.707	Pygocentrus_nattereri
ENSFCAG00000010900	SMG7	100	95.052	ENSRNOG00000027962	Smg7	100	95.238	Rattus_norvegicus
ENSFCAG00000010900	SMG7	100	97.605	ENSRBIG00000036316	SMG7	99	97.605	Rhinopithecus_bieti
ENSFCAG00000010900	SMG7	100	97.699	ENSRROG00000035719	SMG7	100	97.634	Rhinopithecus_roxellana
ENSFCAG00000010900	SMG7	100	97.699	ENSSBOG00000023454	SMG7	100	97.283	Saimiri_boliviensis_boliviensis
ENSFCAG00000010900	SMG7	99	88.590	ENSSHAG00000013147	SMG7	99	88.948	Sarcophilus_harrisii
ENSFCAG00000010900	SMG7	99	74.619	ENSSFOG00015017252	smg7	99	75.789	Scleropages_formosus
ENSFCAG00000010900	SMG7	99	69.712	ENSSMAG00000006067	smg7	99	65.311	Scophthalmus_maximus
ENSFCAG00000010900	SMG7	99	63.415	ENSSDUG00000017543	smg7	99	64.273	Seriola_dumerili
ENSFCAG00000010900	SMG7	99	85.939	ENSSPUG00000002064	SMG7	99	85.702	Sphenodon_punctatus
ENSFCAG00000010900	SMG7	100	64.410	ENSSPAG00000008733	smg7	100	64.087	Stegastes_partitus
ENSFCAG00000010900	SMG7	100	98.504	ENSSSCG00000015558	SMG7	100	98.072	Sus_scrofa
ENSFCAG00000010900	SMG7	99	85.424	ENSTGUG00000003928	SMG7	100	86.167	Taeniopygia_guttata
ENSFCAG00000010900	SMG7	99	65.563	ENSTNIG00000002802	smg7	99	63.997	Tetraodon_nigroviridis
ENSFCAG00000010900	SMG7	77	95.763	ENSTBEG00000003220	SMG7	81	92.489	Tupaia_belangeri
ENSFCAG00000010900	SMG7	96	98.023	ENSTTRG00000014778	SMG7	100	95.474	Tursiops_truncatus
ENSFCAG00000010900	SMG7	99	98.544	ENSUAMG00000017473	SMG7	100	98.569	Ursus_americanus
ENSFCAG00000010900	SMG7	99	98.544	ENSUMAG00000016389	SMG7	100	98.569	Ursus_maritimus
ENSFCAG00000010900	SMG7	100	98.733	ENSVVUG00000008976	SMG7	100	98.733	Vulpes_vulpes
ENSFCAG00000010900	SMG7	100	68.166	ENSXETG00000012528	smg7	99	69.930	Xenopus_tropicalis
ENSFCAG00000010900	SMG7	99	62.489	ENSXMAG00000007123	smg7	99	62.823	Xiphophorus_maculatus