EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000011179 (Gene tree)
Gene ID: 101090646
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 77498 bases
Position: chrD2:6627995-6705492
Accession: 101090646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000010384	DND1_DSRM	PF14709.7	1.3e-24	1	1
ENSFCAP00000040147	DND1_DSRM	PF14709.7	1.3e-24	1	1
ENSFCAP00000010384	RRM_1	PF00076.22	1.2e-39	1	3
ENSFCAP00000010384	RRM_1	PF00076.22	1.2e-39	2	3
ENSFCAP00000010384	RRM_1	PF00076.22	1.2e-39	3	3
ENSFCAP00000040147	RRM_1	PF00076.22	1.5e-39	1	3
ENSFCAP00000040147	RRM_1	PF00076.22	1.5e-39	2	3
ENSFCAP00000040147	RRM_1	PF00076.22	1.5e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000011182	A1CF-201	2363	XM_006937714	ENSFCAP00000010384	584 (aa)	XP_006937776	M3WEL9
ENSFCAT00000067045	A1CF-202	1797	-	ENSFCAP00000040147	598 (aa)	-	UPI000DE7DB95

Gene Model

Click here to download ENSFCAG00000011179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000011179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000011179	A1CF	74	59.551	ENSFCAG00000012399	RBM47	77	57.783
ENSFCAG00000011179	A1CF	54	51.899	ENSFCAG00000019123	HNRNPR	51	51.899
ENSFCAG00000011179	A1CF	52	52.104	ENSFCAG00000023146	SYNCRIP	57	51.077
ENSFCAG00000011179	A1CF	75	68.889	ENSFCAG00000029812	RBM46	88	68.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000011179	A1CF	100	94.369	ENSG00000148584	A1CF	100	96.020	Homo_sapiens
ENSFCAG00000011179	A1CF	100	74.199	ENSAPOG00000008259	a1cf	100	73.524	Acanthochromis_polyacanthus
ENSFCAG00000011179	A1CF	100	95.101	ENSAMEG00000000523	A1CF	100	95.101	Ailuropoda_melanoleuca
ENSFCAG00000011179	A1CF	100	75.868	ENSACIG00000008632	a1cf	100	76.529	Amphilophus_citrinellus
ENSFCAG00000011179	A1CF	100	74.709	ENSAOCG00000023744	a1cf	96	83.478	Amphiprion_ocellaris
ENSFCAG00000011179	A1CF	100	73.563	ENSAPEG00000009537	a1cf	100	73.563	Amphiprion_percula
ENSFCAG00000011179	A1CF	100	75.743	ENSATEG00000013720	a1cf	100	76.578	Anabas_testudineus
ENSFCAG00000011179	A1CF	100	86.678	ENSAPLG00000002964	A1CF	100	86.509	Anas_platyrhynchos
ENSFCAG00000011179	A1CF	100	83.590	ENSACAG00000015269	A1CF	100	82.564	Anolis_carolinensis
ENSFCAG00000011179	A1CF	100	94.539	ENSANAG00000019974	A1CF	100	94.369	Aotus_nancymaae
ENSFCAG00000011179	A1CF	100	74.210	ENSACLG00000017428	a1cf	100	75.707	Astatotilapia_calliptera
ENSFCAG00000011179	A1CF	100	73.223	ENSAMXG00000018180	a1cf	100	72.397	Astyanax_mexicanus
ENSFCAG00000011179	A1CF	100	94.037	ENSBTAG00000021195	A1CF	100	93.867	Bos_taurus
ENSFCAG00000011179	A1CF	100	93.603	ENSCJAG00000005045	A1CF	100	93.434	Callithrix_jacchus
ENSFCAG00000011179	A1CF	100	95.439	ENSCAFG00000015581	A1CF	100	95.439	Canis_familiaris
ENSFCAG00000011179	A1CF	100	95.439	ENSCAFG00020026421	A1CF	98	97.980	Canis_lupus_dingo
ENSFCAG00000011179	A1CF	100	92.101	ENSCHIG00000020411	A1CF	100	91.933	Capra_hircus
ENSFCAG00000011179	A1CF	100	90.000	ENSTSYG00000001755	A1CF	100	94.737	Carlito_syrichta
ENSFCAG00000011179	A1CF	85	93.388	ENSCAPG00000017386	A1CF	90	91.903	Cavia_aperea
ENSFCAG00000011179	A1CF	100	91.751	ENSCPOG00000009807	A1CF	100	91.751	Cavia_porcellus
ENSFCAG00000011179	A1CF	100	93.761	ENSCCAG00000018168	A1CF	100	93.592	Cebus_capucinus
ENSFCAG00000011179	A1CF	100	94.692	ENSCATG00000043715	A1CF	100	94.692	Cercocebus_atys
ENSFCAG00000011179	A1CF	100	91.779	ENSCLAG00000010424	A1CF	100	91.107	Chinchilla_lanigera
ENSFCAG00000011179	A1CF	100	93.243	ENSCSAG00000007032	A1CF	100	93.243	Chlorocebus_sabaeus
ENSFCAG00000011179	A1CF	100	88.226	ENSCHOG00000009089	A1CF	100	87.396	Choloepus_hoffmanni
ENSFCAG00000011179	A1CF	100	86.172	ENSCPBG00000026464	A1CF	100	85.835	Chrysemys_picta_bellii
ENSFCAG00000011179	A1CF	100	93.412	ENSCANG00000038032	A1CF	100	93.412	Colobus_angolensis_palliatus
ENSFCAG00000011179	A1CF	100	90.252	ENSCGRG00001017413	A1cf	100	90.084	Cricetulus_griseus_chok1gshd
ENSFCAG00000011179	A1CF	100	89.580	ENSCGRG00000017332	A1cf	100	90.420	Cricetulus_griseus_crigri
ENSFCAG00000011179	A1CF	100	73.798	ENSCSEG00000002361	a1cf	100	74.295	Cynoglossus_semilaevis
ENSFCAG00000011179	A1CF	100	75.413	ENSCVAG00000010520	a1cf	100	76.578	Cyprinodon_variegatus
ENSFCAG00000011179	A1CF	100	78.644	ENSDARG00000002968	a1cf	100	80.000	Danio_rerio
ENSFCAG00000011179	A1CF	100	91.597	ENSDNOG00000002829	A1CF	100	91.597	Dasypus_novemcinctus
ENSFCAG00000011179	A1CF	82	90.580	ENSETEG00000012527	A1CF	81	90.580	Echinops_telfairi
ENSFCAG00000011179	A1CF	100	93.802	ENSEASG00005012924	A1CF	100	93.635	Equus_asinus_asinus
ENSFCAG00000011179	A1CF	100	93.467	ENSECAG00000010424	A1CF	100	93.300	Equus_caballus
ENSFCAG00000011179	A1CF	78	81.004	ENSEEUG00000000013	A1CF	97	81.448	Erinaceus_europaeus
ENSFCAG00000011179	A1CF	100	77.090	ENSELUG00000003159	a1cf	100	77.926	Esox_lucius
ENSFCAG00000011179	A1CF	100	87.350	ENSFALG00000013183	A1CF	100	87.009	Ficedula_albicollis
ENSFCAG00000011179	A1CF	100	92.334	ENSFDAG00000019371	A1CF	100	91.652	Fukomys_damarensis
ENSFCAG00000011179	A1CF	100	70.957	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSFCAG00000011179	A1CF	100	70.579	ENSGMOG00000018943	a1cf	100	69.983	Gadus_morhua
ENSFCAG00000011179	A1CF	94	88.235	ENSGALG00000003765	A1CF	96	87.879	Gallus_gallus
ENSFCAG00000011179	A1CF	100	70.500	ENSGAFG00000014868	a1cf	100	71.000	Gambusia_affinis
ENSFCAG00000011179	A1CF	100	72.697	ENSGACG00000010241	a1cf	100	72.951	Gasterosteus_aculeatus
ENSFCAG00000011179	A1CF	94	87.057	ENSGAGG00000016508	A1CF	97	86.702	Gopherus_agassizii
ENSFCAG00000011179	A1CF	100	93.266	ENSGGOG00000009670	A1CF	100	92.761	Gorilla_gorilla
ENSFCAG00000011179	A1CF	100	75.041	ENSHBUG00000021959	a1cf	100	76.198	Haplochromis_burtoni
ENSFCAG00000011179	A1CF	100	91.933	ENSHGLG00000008955	A1CF	100	91.261	Heterocephalus_glaber_female
ENSFCAG00000011179	A1CF	100	91.261	ENSHGLG00100000518	A1CF	100	90.588	Heterocephalus_glaber_male
ENSFCAG00000011179	A1CF	100	69.935	ENSHCOG00000017669	a1cf	100	71.778	Hippocampus_comes
ENSFCAG00000011179	A1CF	89	81.157	ENSIPUG00000010367	a1cf	95	81.614	Ictalurus_punctatus
ENSFCAG00000011179	A1CF	100	75.447	ENSKMAG00000006568	a1cf	100	75.851	Kryptolebias_marmoratus
ENSFCAG00000011179	A1CF	99	73.806	ENSLBEG00000020994	a1cf	98	74.629	Labrus_bergylta
ENSFCAG00000011179	A1CF	100	82.143	ENSLACG00000008061	A1CF	100	81.973	Latimeria_chalumnae
ENSFCAG00000011179	A1CF	100	80.737	ENSLOCG00000006302	a1cf	100	80.235	Lepisosteus_oculatus
ENSFCAG00000011179	A1CF	100	91.933	ENSLAFG00000015462	A1CF	100	91.597	Loxodonta_africana
ENSFCAG00000011179	A1CF	100	94.863	ENSMFAG00000035948	A1CF	100	94.863	Macaca_fascicularis
ENSFCAG00000011179	A1CF	100	94.863	ENSMMUG00000007077	A1CF	100	94.863	Macaca_mulatta
ENSFCAG00000011179	A1CF	100	94.521	ENSMNEG00000031454	A1CF	100	94.521	Macaca_nemestrina
ENSFCAG00000011179	A1CF	100	93.412	ENSMLEG00000037223	A1CF	100	93.412	Mandrillus_leucophaeus
ENSFCAG00000011179	A1CF	100	74.295	ENSMAMG00000010402	a1cf	100	75.497	Mastacembelus_armatus
ENSFCAG00000011179	A1CF	100	74.958	ENSMZEG00005013245	a1cf	100	75.712	Maylandia_zebra
ENSFCAG00000011179	A1CF	100	87.037	ENSMGAG00000001507	A1CF	100	86.700	Meleagris_gallopavo
ENSFCAG00000011179	A1CF	100	89.748	ENSMAUG00000007422	A1cf	100	89.580	Mesocricetus_auratus
ENSFCAG00000011179	A1CF	100	93.051	ENSMICG00000003377	A1CF	100	92.881	Microcebus_murinus
ENSFCAG00000011179	A1CF	100	90.252	ENSMOCG00000021536	A1cf	100	90.084	Microtus_ochrogaster
ENSFCAG00000011179	A1CF	100	68.053	ENSMMOG00000009422	a1cf	100	70.167	Mola_mola
ENSFCAG00000011179	A1CF	92	89.572	ENSMODG00000016478	A1CF	97	89.827	Monodelphis_domestica
ENSFCAG00000011179	A1CF	100	73.854	ENSMALG00000012992	a1cf	100	73.514	Monopterus_albus
ENSFCAG00000011179	A1CF	100	90.801	MGP_CAROLIEiJ_G0022873	A1cf	100	90.460	Mus_caroli
ENSFCAG00000011179	A1CF	100	90.801	ENSMUSG00000052595	A1cf	99	93.963	Mus_musculus
ENSFCAG00000011179	A1CF	100	90.801	MGP_PahariEiJ_G0014366	A1cf	100	89.608	Mus_pahari
ENSFCAG00000011179	A1CF	100	90.630	MGP_SPRETEiJ_G0023792	A1cf	100	90.290	Mus_spretus
ENSFCAG00000011179	A1CF	100	88.176	ENSMPUG00000016971	A1CF	100	88.176	Mustela_putorius_furo
ENSFCAG00000011179	A1CF	100	92.101	ENSMLUG00000016071	A1CF	100	92.101	Myotis_lucifugus
ENSFCAG00000011179	A1CF	100	91.261	ENSNGAG00000015136	A1cf	100	91.261	Nannospalax_galili
ENSFCAG00000011179	A1CF	100	75.372	ENSNBRG00000001712	a1cf	100	76.529	Neolamprologus_brichardi
ENSFCAG00000011179	A1CF	100	93.613	ENSNLEG00000012028	A1CF	100	92.941	Nomascus_leucogenys
ENSFCAG00000011179	A1CF	94	89.493	ENSMEUG00000015909	A1CF	100	89.130	Notamacropus_eugenii
ENSFCAG00000011179	A1CF	89	81.143	ENSOPRG00000010667	A1CF	97	81.250	Ochotona_princeps
ENSFCAG00000011179	A1CF	100	75.537	ENSONIG00000019105	a1cf	100	77.025	Oreochromis_niloticus
ENSFCAG00000011179	A1CF	78	88.017	ENSOANG00000007360	A1CF	99	88.017	Ornithorhynchus_anatinus
ENSFCAG00000011179	A1CF	100	92.177	ENSOCUG00000011587	A1CF	100	92.517	Oryctolagus_cuniculus
ENSFCAG00000011179	A1CF	100	72.906	ENSORLG00000013342	a1cf	100	73.071	Oryzias_latipes
ENSFCAG00000011179	A1CF	100	74.304	ENSORLG00020000586	a1cf	100	73.856	Oryzias_latipes_hni
ENSFCAG00000011179	A1CF	100	74.141	ENSORLG00015018569	a1cf	100	73.693	Oryzias_latipes_hsok
ENSFCAG00000011179	A1CF	100	75.290	ENSOMEG00000013531	a1cf	100	74.129	Oryzias_melastigma
ENSFCAG00000011179	A1CF	100	91.892	ENSOGAG00000012884	A1CF	100	91.892	Otolemur_garnettii
ENSFCAG00000011179	A1CF	100	92.605	ENSOARG00000013695	A1CF	100	92.269	Ovis_aries
ENSFCAG00000011179	A1CF	100	90.365	ENSPPAG00000028115	A1CF	100	94.332	Pan_paniscus
ENSFCAG00000011179	A1CF	100	98.997	ENSPPRG00000012180	A1CF	100	98.997	Panthera_pardus
ENSFCAG00000011179	A1CF	100	98.829	ENSPTIG00000021223	A1CF	100	98.829	Panthera_tigris_altaica
ENSFCAG00000011179	A1CF	100	94.369	ENSPTRG00000002508	A1CF	100	93.857	Pan_troglodytes
ENSFCAG00000011179	A1CF	100	94.863	ENSPANG00000021988	A1CF	100	94.863	Papio_anubis
ENSFCAG00000011179	A1CF	100	78.667	ENSPKIG00000025176	a1cf	100	78.428	Paramormyrops_kingsleyae
ENSFCAG00000011179	A1CF	100	87.009	ENSPSIG00000010318	A1CF	100	86.667	Pelodiscus_sinensis
ENSFCAG00000011179	A1CF	88	71.954	ENSPMGG00000013359	a1cf	99	68.000	Periophthalmus_magnuspinnatus
ENSFCAG00000011179	A1CF	100	90.924	ENSPEMG00000015021	A1cf	100	90.084	Peromyscus_maniculatus_bairdii
ENSFCAG00000011179	A1CF	100	89.402	ENSPCIG00000002175	A1CF	100	89.060	Phascolarctos_cinereus
ENSFCAG00000011179	A1CF	100	74.593	ENSPFOG00000006683	a1cf	100	75.487	Poecilia_formosa
ENSFCAG00000011179	A1CF	100	74.430	ENSPFOG00000007437	-	100	75.325	Poecilia_formosa
ENSFCAG00000011179	A1CF	100	75.413	ENSPLAG00000001210	-	100	76.316	Poecilia_latipinna
ENSFCAG00000011179	A1CF	100	75.413	ENSPLAG00000000026	a1cf	100	76.316	Poecilia_latipinna
ENSFCAG00000011179	A1CF	100	66.993	ENSPMEG00000015529	-	100	68.137	Poecilia_mexicana
ENSFCAG00000011179	A1CF	100	67.881	ENSPMEG00000000921	a1cf	100	69.040	Poecilia_mexicana
ENSFCAG00000011179	A1CF	100	74.430	ENSPREG00000016298	a1cf	100	75.407	Poecilia_reticulata
ENSFCAG00000011179	A1CF	100	94.719	ENSPPYG00000002819	A1CF	100	94.037	Pongo_abelii
ENSFCAG00000011179	A1CF	79	73.491	ENSPCAG00000006463	A1CF	70	89.362	Procavia_capensis
ENSFCAG00000011179	A1CF	100	92.282	ENSPCOG00000024172	A1CF	100	91.946	Propithecus_coquereli
ENSFCAG00000011179	A1CF	100	74.225	ENSPNYG00000017944	a1cf	100	75.367	Pundamilia_nyererei
ENSFCAG00000011179	A1CF	100	80.705	ENSPNAG00000007704	a1cf	100	80.034	Pygocentrus_nattereri
ENSFCAG00000011179	A1CF	100	91.141	ENSRNOG00000033195	A1cf	100	90.801	Rattus_norvegicus
ENSFCAG00000011179	A1CF	100	87.037	ENSRBIG00000042892	A1CF	100	93.000	Rhinopithecus_bieti
ENSFCAG00000011179	A1CF	100	93.581	ENSRROG00000041398	A1CF	100	93.581	Rhinopithecus_roxellana
ENSFCAG00000011179	A1CF	100	93.277	ENSSBOG00000021930	A1CF	100	93.042	Saimiri_boliviensis_boliviensis
ENSFCAG00000011179	A1CF	100	88.718	ENSSHAG00000005096	A1CF	100	88.718	Sarcophilus_harrisii
ENSFCAG00000011179	A1CF	100	79.496	ENSSFOG00015011774	a1cf	100	79.328	Scleropages_formosus
ENSFCAG00000011179	A1CF	100	73.127	ENSSMAG00000013271	a1cf	100	72.801	Scophthalmus_maximus
ENSFCAG00000011179	A1CF	100	74.295	ENSSDUG00000013930	a1cf	100	75.042	Seriola_dumerili
ENSFCAG00000011179	A1CF	100	70.067	ENSSLDG00000004290	a1cf	100	70.805	Seriola_lalandi_dorsalis
ENSFCAG00000011179	A1CF	95	83.692	ENSSARG00000005940	A1CF	96	83.154	Sorex_araneus
ENSFCAG00000011179	A1CF	94	86.170	ENSSPUG00000006797	A1CF	94	85.816	Sphenodon_punctatus
ENSFCAG00000011179	A1CF	100	92.941	ENSSSCG00000010431	A1CF	100	92.437	Sus_scrofa
ENSFCAG00000011179	A1CF	100	86.000	ENSTGUG00000005090	A1CF	100	85.619	Taeniopygia_guttata
ENSFCAG00000011179	A1CF	100	73.083	ENSTRUG00000001982	a1cf	100	72.313	Takifugu_rubripes
ENSFCAG00000011179	A1CF	100	73.171	ENSTNIG00000003580	a1cf	100	72.520	Tetraodon_nigroviridis
ENSFCAG00000011179	A1CF	100	84.219	ENSTTRG00000013190	A1CF	100	84.053	Tursiops_truncatus
ENSFCAG00000011179	A1CF	100	96.404	ENSUAMG00000020065	A1CF	100	96.404	Ursus_americanus
ENSFCAG00000011179	A1CF	100	94.595	ENSUMAG00000011162	A1CF	100	94.426	Ursus_maritimus
ENSFCAG00000011179	A1CF	87	89.864	ENSVPAG00000006130	A1CF	86	89.669	Vicugna_pacos
ENSFCAG00000011179	A1CF	100	96.575	ENSVVUG00000002504	A1CF	100	96.575	Vulpes_vulpes
ENSFCAG00000011179	A1CF	100	77.722	ENSXETG00000006611	a1cf	100	77.052	Xenopus_tropicalis
ENSFCAG00000011179	A1CF	100	76.578	ENSXCOG00000003302	a1cf	100	77.243	Xiphophorus_couchianus
ENSFCAG00000011179	A1CF	100	75.574	ENSXMAG00000016703	a1cf	100	76.230	Xiphophorus_maculatus