EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000011601 (Gene tree)
Gene ID: 101087508
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 9131 bases
Position: chrC1:161154841-161163971
Accession: 101087508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000010770	RRM_1	PF00076.22	2.4e-16	1	1
ENSFCAP00000010770	RRM_3	PF08777.11	2.2e-31	1	1
ENSFCAP00000010770	La	PF05383.17	7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000011604	SSB-201	1648	XM_011285323	ENSFCAP00000010770	406 (aa)	XP_011283625	M3WFE1

Gene Model

Click here to download ENSFCAG00000011601's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000011601's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000011601	SSB	100	94.621	ENSG00000138385	SSB	100	98.370	Homo_sapiens
ENSFCAG00000011601	SSB	98	55.831	ENSAPOG00000003448	ssb	100	56.265	Acanthochromis_polyacanthus
ENSFCAG00000011601	SSB	100	93.810	ENSAMEG00000010507	SSB	100	93.810	Ailuropoda_melanoleuca
ENSFCAG00000011601	SSB	92	58.824	ENSACIG00000001738	ssb	97	58.667	Amphilophus_citrinellus
ENSFCAG00000011601	SSB	98	56.079	ENSAOCG00000020398	ssb	100	56.757	Amphiprion_ocellaris
ENSFCAG00000011601	SSB	98	56.576	ENSAPEG00000020395	ssb	100	57.248	Amphiprion_percula
ENSFCAG00000011601	SSB	99	57.740	ENSATEG00000016884	ssb	100	58.231	Anabas_testudineus
ENSFCAG00000011601	SSB	100	69.811	ENSAPLG00000006109	SSB	100	71.831	Anas_platyrhynchos
ENSFCAG00000011601	SSB	100	67.640	ENSACAG00000017008	SSB	99	67.640	Anolis_carolinensis
ENSFCAG00000011601	SSB	100	85.714	ENSANAG00000027195	-	100	85.714	Aotus_nancymaae
ENSFCAG00000011601	SSB	99	55.309	ENSACLG00000010798	ssb	100	55.062	Astatotilapia_calliptera
ENSFCAG00000011601	SSB	98	55.637	ENSAMXG00000012606	ssb	100	56.416	Astyanax_mexicanus
ENSFCAG00000011601	SSB	100	94.581	ENSBTAG00000008716	SSB	100	94.581	Bos_taurus
ENSFCAG00000011601	SSB	73	35.099	WBGene00016653	C44E4.4	85	33.041	Caenorhabditis_elegans
ENSFCAG00000011601	SSB	100	94.335	ENSCJAG00000045073	SSB	100	94.335	Callithrix_jacchus
ENSFCAG00000011601	SSB	100	97.044	ENSCAFG00000012418	SSB	100	97.044	Canis_familiaris
ENSFCAG00000011601	SSB	100	97.044	ENSCAFG00020002900	SSB	100	97.044	Canis_lupus_dingo
ENSFCAG00000011601	SSB	100	94.581	ENSCHIG00000022624	-	100	94.581	Capra_hircus
ENSFCAG00000011601	SSB	100	88.670	ENSCHIG00000022196	-	100	88.670	Capra_hircus
ENSFCAG00000011601	SSB	100	94.089	ENSTSYG00000000097	SSB	100	94.089	Carlito_syrichta
ENSFCAG00000011601	SSB	100	95.074	ENSCPOG00000003338	SSB	100	95.074	Cavia_porcellus
ENSFCAG00000011601	SSB	100	95.074	ENSCCAG00000035147	SSB	100	95.074	Cebus_capucinus
ENSFCAG00000011601	SSB	100	74.138	ENSCATG00000036701	SSB	100	74.138	Cercocebus_atys
ENSFCAG00000011601	SSB	100	70.690	ENSCATG00000042909	-	100	70.690	Cercocebus_atys
ENSFCAG00000011601	SSB	100	94.828	ENSCLAG00000015617	-	100	94.828	Chinchilla_lanigera
ENSFCAG00000011601	SSB	100	94.828	ENSCSAG00000015200	SSB	89	94.828	Chlorocebus_sabaeus
ENSFCAG00000011601	SSB	98	85.930	ENSCSAG00000018390	-	100	85.930	Chlorocebus_sabaeus
ENSFCAG00000011601	SSB	100	94.581	ENSCHOG00000007763	SSB	100	94.581	Choloepus_hoffmanni
ENSFCAG00000011601	SSB	100	78.293	ENSCPBG00000006519	SSB	100	78.780	Chrysemys_picta_bellii
ENSFCAG00000011601	SSB	100	95.074	ENSCANG00000027695	SSB	100	95.074	Colobus_angolensis_palliatus
ENSFCAG00000011601	SSB	100	80.049	ENSCANG00000033240	-	100	80.049	Colobus_angolensis_palliatus
ENSFCAG00000011601	SSB	98	74.937	ENSCANG00000028838	-	95	74.937	Colobus_angolensis_palliatus
ENSFCAG00000011601	SSB	100	79.319	ENSCGRG00001024831	Ssb	100	80.535	Cricetulus_griseus_chok1gshd
ENSFCAG00000011601	SSB	100	79.319	ENSCGRG00000005387	Ssb	100	80.535	Cricetulus_griseus_crigri
ENSFCAG00000011601	SSB	98	57.357	ENSCSEG00000011599	ssb	99	58.105	Cynoglossus_semilaevis
ENSFCAG00000011601	SSB	99	57.843	ENSCVAG00000021558	ssb	100	58.333	Cyprinodon_variegatus
ENSFCAG00000011601	SSB	98	56.858	ENSDARG00000029252	ssb	99	56.858	Danio_rerio
ENSFCAG00000011601	SSB	100	93.842	ENSDNOG00000013450	SSB	100	93.842	Dasypus_novemcinctus
ENSFCAG00000011601	SSB	100	84.466	ENSDORG00000005543	Ssb	100	84.466	Dipodomys_ordii
ENSFCAG00000011601	SSB	83	34.097	FBgn0011638	La	92	33.947	Drosophila_melanogaster
ENSFCAG00000011601	SSB	58	94.527	ENSETEG00000004614	-	61	94.527	Echinops_telfairi
ENSFCAG00000011601	SSB	96	47.328	ENSEBUG00000001237	ssb	96	47.583	Eptatretus_burgeri
ENSFCAG00000011601	SSB	100	96.552	ENSEASG00005022835	SSB	100	96.552	Equus_asinus_asinus
ENSFCAG00000011601	SSB	100	96.798	ENSECAG00000018495	SSB	100	96.798	Equus_caballus
ENSFCAG00000011601	SSB	75	75.490	ENSEEUG00000008077	SSB	78	75.490	Erinaceus_europaeus
ENSFCAG00000011601	SSB	98	58.853	ENSELUG00000020929	ssb	100	59.360	Esox_lucius
ENSFCAG00000011601	SSB	100	75.245	ENSFALG00000000930	SSB	100	75.245	Ficedula_albicollis
ENSFCAG00000011601	SSB	100	94.335	ENSFDAG00000000598	SSB	100	94.335	Fukomys_damarensis
ENSFCAG00000011601	SSB	72	56.522	ENSFHEG00000003268	ssb	95	56.536	Fundulus_heteroclitus
ENSFCAG00000011601	SSB	97	55.172	ENSGMOG00000002664	ssb	99	55.693	Gadus_morhua
ENSFCAG00000011601	SSB	100	74.328	ENSGALG00000009677	SSB	100	74.328	Gallus_gallus
ENSFCAG00000011601	SSB	99	56.757	ENSGAFG00000002749	ssb	100	57.002	Gambusia_affinis
ENSFCAG00000011601	SSB	99	54.479	ENSGACG00000005107	ssb	100	54.831	Gasterosteus_aculeatus
ENSFCAG00000011601	SSB	100	78.049	ENSGAGG00000007807	SSB	100	78.049	Gopherus_agassizii
ENSFCAG00000011601	SSB	63	90.708	ENSGGOG00000023471	-	100	90.708	Gorilla_gorilla
ENSFCAG00000011601	SSB	100	78.571	ENSGGOG00000024891	-	100	78.571	Gorilla_gorilla
ENSFCAG00000011601	SSB	99	54.815	ENSHBUG00000006584	ssb	100	54.568	Haplochromis_burtoni
ENSFCAG00000011601	SSB	100	86.275	ENSHGLG00000004478	-	100	86.275	Heterocephalus_glaber_female
ENSFCAG00000011601	SSB	100	85.468	ENSHGLG00000005832	-	100	85.468	Heterocephalus_glaber_female
ENSFCAG00000011601	SSB	100	93.220	ENSHGLG00000017580	-	100	93.220	Heterocephalus_glaber_female
ENSFCAG00000011601	SSB	100	93.220	ENSHGLG00100003084	-	100	93.220	Heterocephalus_glaber_male
ENSFCAG00000011601	SSB	100	81.773	ENSHGLG00100008767	-	100	81.773	Heterocephalus_glaber_male
ENSFCAG00000011601	SSB	98	55.025	ENSHCOG00000019011	ssb	99	55.276	Hippocampus_comes
ENSFCAG00000011601	SSB	97	58.458	ENSIPUG00000003681	SSB	99	59.158	Ictalurus_punctatus
ENSFCAG00000011601	SSB	100	95.074	ENSSTOG00000008416	SSB	100	95.074	Ictidomys_tridecemlineatus
ENSFCAG00000011601	SSB	99	67.990	ENSJJAG00000016250	-	99	67.990	Jaculus_jaculus
ENSFCAG00000011601	SSB	100	79.717	ENSJJAG00000023158	-	100	79.717	Jaculus_jaculus
ENSFCAG00000011601	SSB	99	56.757	ENSKMAG00000017317	ssb	100	57.248	Kryptolebias_marmoratus
ENSFCAG00000011601	SSB	98	54.342	ENSLBEG00000017345	ssb	100	55.283	Labrus_bergylta
ENSFCAG00000011601	SSB	99	66.176	ENSLACG00000014056	SSB	99	68.460	Latimeria_chalumnae
ENSFCAG00000011601	SSB	98	66.334	ENSLOCG00000007933	ssb	99	66.833	Lepisosteus_oculatus
ENSFCAG00000011601	SSB	74	69.536	ENSLAFG00000026721	-	99	69.536	Loxodonta_africana
ENSFCAG00000011601	SSB	100	78.818	ENSLAFG00000028909	-	100	78.818	Loxodonta_africana
ENSFCAG00000011601	SSB	100	87.678	ENSLAFG00000000867	-	100	89.336	Loxodonta_africana
ENSFCAG00000011601	SSB	88	81.232	ENSMFAG00000041478	-	100	81.232	Macaca_fascicularis
ENSFCAG00000011601	SSB	100	95.074	ENSMFAG00000039066	SSB	100	95.074	Macaca_fascicularis
ENSFCAG00000011601	SSB	100	79.803	ENSMMUG00000011724	-	97	79.803	Macaca_mulatta
ENSFCAG00000011601	SSB	100	95.074	ENSMMUG00000023051	SSB	100	95.074	Macaca_mulatta
ENSFCAG00000011601	SSB	99	66.832	ENSMMUG00000039889	-	100	67.079	Macaca_mulatta
ENSFCAG00000011601	SSB	100	82.725	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSFCAG00000011601	SSB	88	81.232	ENSMNEG00000034698	-	100	81.232	Macaca_nemestrina
ENSFCAG00000011601	SSB	100	67.241	ENSMLEG00000042644	-	100	67.241	Mandrillus_leucophaeus
ENSFCAG00000011601	SSB	100	95.074	ENSMLEG00000035717	SSB	100	95.074	Mandrillus_leucophaeus
ENSFCAG00000011601	SSB	99	58.722	ENSMAMG00000004800	ssb	100	59.214	Mastacembelus_armatus
ENSFCAG00000011601	SSB	99	55.309	ENSMZEG00005005749	ssb	100	55.062	Maylandia_zebra
ENSFCAG00000011601	SSB	100	74.328	ENSMGAG00000010328	SSB	99	75.610	Meleagris_gallopavo
ENSFCAG00000011601	SSB	98	87.940	ENSMICG00000033304	-	94	90.541	Microcebus_murinus
ENSFCAG00000011601	SSB	99	95.792	ENSMICG00000028252	-	99	95.792	Microcebus_murinus
ENSFCAG00000011601	SSB	85	81.132	ENSMODG00000007027	-	99	81.132	Monodelphis_domestica
ENSFCAG00000011601	SSB	100	77.644	ENSMODG00000008227	-	100	78.846	Monodelphis_domestica
ENSFCAG00000011601	SSB	100	66.749	ENSMODG00000019271	-	100	67.241	Monodelphis_domestica
ENSFCAG00000011601	SSB	90	58.311	ENSMALG00000008045	ssb	90	58.621	Monopterus_albus
ENSFCAG00000011601	SSB	100	77.488	MGP_CAROLIEiJ_G0023629	-	100	91.304	Mus_caroli
ENSFCAG00000011601	SSB	100	76.777	ENSMUSG00000068882	Ssb	100	91.304	Mus_musculus
ENSFCAG00000011601	SSB	100	76.777	MGP_PahariEiJ_G0025081	-	100	91.304	Mus_pahari
ENSFCAG00000011601	SSB	100	76.777	MGP_SPRETEiJ_G0024551	Ssb	100	91.304	Mus_spretus
ENSFCAG00000011601	SSB	100	97.537	ENSMPUG00000000785	SSB	100	97.537	Mustela_putorius_furo
ENSFCAG00000011601	SSB	100	90.024	ENSMLUG00000016316	SSB	100	90.024	Myotis_lucifugus
ENSFCAG00000011601	SSB	99	55.309	ENSNBRG00000012661	ssb	100	55.062	Neolamprologus_brichardi
ENSFCAG00000011601	SSB	100	95.320	ENSNLEG00000004958	SSB	100	95.320	Nomascus_leucogenys
ENSFCAG00000011601	SSB	100	68.719	ENSNLEG00000028754	-	100	68.719	Nomascus_leucogenys
ENSFCAG00000011601	SSB	61	86.694	ENSMEUG00000001650	-	100	86.694	Notamacropus_eugenii
ENSFCAG00000011601	SSB	72	72.509	ENSOPRG00000008475	-	100	73.540	Ochotona_princeps
ENSFCAG00000011601	SSB	93	88.654	ENSODEG00000004202	-	100	88.654	Octodon_degus
ENSFCAG00000011601	SSB	99	55.309	ENSONIG00000008776	ssb	100	55.062	Oreochromis_niloticus
ENSFCAG00000011601	SSB	100	83.744	ENSOANG00000008543	SSB	100	83.744	Ornithorhynchus_anatinus
ENSFCAG00000011601	SSB	100	94.581	ENSOCUG00000010396	SSB	100	94.581	Oryctolagus_cuniculus
ENSFCAG00000011601	SSB	99	58.722	ENSORLG00000017208	ssb	100	58.968	Oryzias_latipes
ENSFCAG00000011601	SSB	99	58.477	ENSORLG00020022574	ssb	100	58.722	Oryzias_latipes_hni
ENSFCAG00000011601	SSB	99	58.477	ENSORLG00015016592	ssb	100	58.722	Oryzias_latipes_hsok
ENSFCAG00000011601	SSB	98	57.960	ENSOMEG00000003193	ssb	100	58.867	Oryzias_melastigma
ENSFCAG00000011601	SSB	100	89.362	ENSOGAG00000029768	SSB	100	89.362	Otolemur_garnettii
ENSFCAG00000011601	SSB	100	94.089	ENSOARG00000002906	SSB	100	94.089	Ovis_aries
ENSFCAG00000011601	SSB	97	73.924	ENSPPAG00000006189	-	96	77.748	Pan_paniscus
ENSFCAG00000011601	SSB	100	77.833	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSFCAG00000011601	SSB	100	94.621	ENSPPAG00000042673	SSB	100	94.621	Pan_paniscus
ENSFCAG00000011601	SSB	100	100.000	ENSPPRG00000006599	SSB	100	100.000	Panthera_pardus
ENSFCAG00000011601	SSB	100	99.754	ENSPTIG00000011021	SSB	97	99.754	Panthera_tigris_altaica
ENSFCAG00000011601	SSB	100	74.138	ENSPTRG00000042880	-	100	74.138	Pan_troglodytes
ENSFCAG00000011601	SSB	100	94.621	ENSPTRG00000012620	SSB	100	94.621	Pan_troglodytes
ENSFCAG00000011601	SSB	100	67.980	ENSPANG00000034126	-	100	68.473	Papio_anubis
ENSFCAG00000011601	SSB	100	95.074	ENSPANG00000007440	SSB	100	95.074	Papio_anubis
ENSFCAG00000011601	SSB	98	66.165	ENSPANG00000031877	-	95	66.165	Papio_anubis
ENSFCAG00000011601	SSB	98	62.687	ENSPKIG00000019325	ssb	99	63.547	Paramormyrops_kingsleyae
ENSFCAG00000011601	SSB	100	75.122	ENSPSIG00000002265	SSB	93	76.098	Pelodiscus_sinensis
ENSFCAG00000011601	SSB	84	54.857	ENSPMGG00000020075	ssb	92	55.301	Periophthalmus_magnuspinnatus
ENSFCAG00000011601	SSB	81	49.394	ENSPMAG00000002982	ssb	89	48.312	Petromyzon_marinus
ENSFCAG00000011601	SSB	100	82.064	ENSPCIG00000028591	-	100	82.801	Phascolarctos_cinereus
ENSFCAG00000011601	SSB	99	58.231	ENSPFOG00000009650	ssb	100	58.477	Poecilia_formosa
ENSFCAG00000011601	SSB	99	57.985	ENSPLAG00000020498	ssb	100	58.231	Poecilia_latipinna
ENSFCAG00000011601	SSB	99	57.494	ENSPMEG00000001051	ssb	100	57.985	Poecilia_mexicana
ENSFCAG00000011601	SSB	94	58.073	ENSPREG00000003708	ssb	99	58.333	Poecilia_reticulata
ENSFCAG00000011601	SSB	100	95.320	ENSPPYG00000012919	SSB	100	95.320	Pongo_abelii
ENSFCAG00000011601	SSB	95	89.062	ENSPCAG00000010276	SSB	100	89.062	Procavia_capensis
ENSFCAG00000011601	SSB	100	91.626	ENSPCOG00000015741	-	100	91.626	Propithecus_coquereli
ENSFCAG00000011601	SSB	100	83.990	ENSPCOG00000023189	-	100	83.990	Propithecus_coquereli
ENSFCAG00000011601	SSB	87	95.763	ENSPVAG00000006615	SSB	100	95.763	Pteropus_vampyrus
ENSFCAG00000011601	SSB	99	55.309	ENSPNYG00000006444	ssb	100	55.062	Pundamilia_nyererei
ENSFCAG00000011601	SSB	98	57.389	ENSPNAG00000011708	ssb	100	58.010	Pygocentrus_nattereri
ENSFCAG00000011601	SSB	100	78.240	ENSRNOG00000011606	AABR07061825.1	100	78.240	Rattus_norvegicus
ENSFCAG00000011601	SSB	100	77.488	ENSRNOG00000007998	Ssb	100	77.488	Rattus_norvegicus
ENSFCAG00000011601	SSB	94	78.421	ENSRBIG00000041232	-	98	78.421	Rhinopithecus_bieti
ENSFCAG00000011601	SSB	100	69.287	ENSRBIG00000029918	-	100	69.287	Rhinopithecus_bieti
ENSFCAG00000011601	SSB	89	86.777	ENSRBIG00000041608	-	98	86.777	Rhinopithecus_bieti
ENSFCAG00000011601	SSB	100	78.345	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSFCAG00000011601	SSB	100	78.870	ENSRROG00000007149	-	100	78.870	Rhinopithecus_roxellana
ENSFCAG00000011601	SSB	98	85.287	ENSRROG00000034102	-	98	85.213	Rhinopithecus_roxellana
ENSFCAG00000011601	SSB	100	95.074	ENSRROG00000040346	SSB	100	95.074	Rhinopithecus_roxellana
ENSFCAG00000011601	SSB	98	79.597	ENSRROG00000031684	-	100	79.597	Rhinopithecus_roxellana
ENSFCAG00000011601	SSB	100	95.567	ENSSBOG00000027204	SSB	100	95.567	Saimiri_boliviensis_boliviensis
ENSFCAG00000011601	SSB	100	81.327	ENSSHAG00000018062	SSB	100	82.801	Sarcophilus_harrisii
ENSFCAG00000011601	SSB	99	64.059	ENSSFOG00015000550	ssb	100	64.548	Scleropages_formosus
ENSFCAG00000011601	SSB	98	54.750	ENSSMAG00000013885	ssb	99	58.289	Scophthalmus_maximus
ENSFCAG00000011601	SSB	99	57.740	ENSSDUG00000020117	ssb	100	57.985	Seriola_dumerili
ENSFCAG00000011601	SSB	99	55.693	ENSSLDG00000002525	ssb	100	55.693	Seriola_lalandi_dorsalis
ENSFCAG00000011601	SSB	95	85.677	ENSSARG00000007747	SSB	100	85.677	Sorex_araneus
ENSFCAG00000011601	SSB	100	76.961	ENSSPUG00000012112	SSB	100	76.961	Sphenodon_punctatus
ENSFCAG00000011601	SSB	98	55.831	ENSSPAG00000005696	ssb	100	56.511	Stegastes_partitus
ENSFCAG00000011601	SSB	97	78.571	ENSSSCG00000015938	SSB	98	78.697	Sus_scrofa
ENSFCAG00000011601	SSB	100	74.146	ENSTGUG00000007942	SSB	100	74.390	Taeniopygia_guttata
ENSFCAG00000011601	SSB	99	57.531	ENSTRUG00000017839	ssb	100	58.128	Takifugu_rubripes
ENSFCAG00000011601	SSB	90	59.783	ENSTNIG00000000915	ssb	100	59.783	Tetraodon_nigroviridis
ENSFCAG00000011601	SSB	83	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSFCAG00000011601	SSB	100	95.567	ENSTTRG00000002152	SSB	100	95.567	Tursiops_truncatus
ENSFCAG00000011601	SSB	93	98.408	ENSUAMG00000027833	SSB	99	98.408	Ursus_americanus
ENSFCAG00000011601	SSB	100	97.537	ENSUMAG00000013907	SSB	100	97.537	Ursus_maritimus
ENSFCAG00000011601	SSB	100	94.581	ENSVPAG00000007183	SSB	100	94.581	Vicugna_pacos
ENSFCAG00000011601	SSB	100	97.044	ENSVVUG00000016573	SSB	78	97.044	Vulpes_vulpes
ENSFCAG00000011601	SSB	100	59.346	ENSXETG00000025402	ssb	100	61.072	Xenopus_tropicalis
ENSFCAG00000011601	SSB	94	55.875	ENSXCOG00000019109	ssb	99	56.136	Xiphophorus_couchianus
ENSFCAG00000011601	SSB	99	56.757	ENSXMAG00000004888	ssb	100	57.002	Xiphophorus_maculatus