EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000011783 (Gene tree)
Gene ID: 101085434
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 23989 bases
Position: chrF1:69632429-69656417
Accession: 101085434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000029072	EST1	PF10374.9	2.8e-24	1	1
ENSFCAP00000029072	EST1_DNA_bind	PF10373.9	2.4e-40	1	2
ENSFCAP00000029072	EST1_DNA_bind	PF10373.9	2.4e-40	2	2
ENSFCAP00000029072	PIN_4	PF13638.6	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000050065	SMG5-201	3039	XM_019822413	ENSFCAP00000029072	1012 (aa)	XP_019677972	A0A2I2U9F4

Gene Model

Click here to download ENSFCAG00000011783's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000011783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000011783	SMG5	100	93.412	ENSG00000198952	SMG5	100	93.996	Homo_sapiens
ENSFCAG00000011783	SMG5	99	66.435	ENSAPOG00000019690	smg5	99	65.907	Acanthochromis_polyacanthus
ENSFCAG00000011783	SMG5	98	95.468	ENSAMEG00000014458	SMG5	100	95.468	Ailuropoda_melanoleuca
ENSFCAG00000011783	SMG5	99	64.569	ENSACIG00000001353	smg5	99	65.861	Amphilophus_citrinellus
ENSFCAG00000011783	SMG5	98	64.548	ENSAOCG00000019483	smg5	99	60.982	Amphiprion_ocellaris
ENSFCAG00000011783	SMG5	98	66.000	ENSAPEG00000022949	smg5	98	65.900	Amphiprion_percula
ENSFCAG00000011783	SMG5	99	65.761	ENSATEG00000005348	smg5	99	66.214	Anabas_testudineus
ENSFCAG00000011783	SMG5	98	77.561	ENSAPLG00000010263	SMG5	100	77.561	Anas_platyrhynchos
ENSFCAG00000011783	SMG5	100	93.019	ENSANAG00000032899	SMG5	100	93.799	Aotus_nancymaae
ENSFCAG00000011783	SMG5	99	64.626	ENSACLG00000009311	smg5	99	64.981	Astatotilapia_calliptera
ENSFCAG00000011783	SMG5	99	44.434	ENSBTAG00000021747	-	99	43.853	Bos_taurus
ENSFCAG00000011783	SMG5	100	92.920	ENSBTAG00000009435	SMG5	100	94.094	Bos_taurus
ENSFCAG00000011783	SMG5	100	93.215	ENSCJAG00000005684	SMG5	100	93.996	Callithrix_jacchus
ENSFCAG00000011783	SMG5	100	97.036	ENSCAFG00000016839	SMG5	100	97.036	Canis_familiaris
ENSFCAG00000011783	SMG5	100	97.036	ENSCAFG00020006061	SMG5	100	97.036	Canis_lupus_dingo
ENSFCAG00000011783	SMG5	99	44.368	ENSCHIG00000006323	-	99	43.965	Capra_hircus
ENSFCAG00000011783	SMG5	100	93.805	ENSCHIG00000007709	SMG5	100	93.701	Capra_hircus
ENSFCAG00000011783	SMG5	100	93.811	ENSTSYG00000004099	SMG5	100	93.805	Carlito_syrichta
ENSFCAG00000011783	SMG5	97	71.530	ENSCAPG00000003631	SMG5	100	72.586	Cavia_aperea
ENSFCAG00000011783	SMG5	100	92.444	ENSCPOG00000015696	SMG5	100	92.633	Cavia_porcellus
ENSFCAG00000011783	SMG5	100	93.314	ENSCCAG00000027409	SMG5	100	94.094	Cebus_capucinus
ENSFCAG00000011783	SMG5	100	93.314	ENSCATG00000030539	SMG5	100	93.996	Cercocebus_atys
ENSFCAG00000011783	SMG5	100	93.131	ENSCLAG00000003983	SMG5	100	93.517	Chinchilla_lanigera
ENSFCAG00000011783	SMG5	100	93.215	ENSCSAG00000002120	SMG5	100	93.898	Chlorocebus_sabaeus
ENSFCAG00000011783	SMG5	54	87.956	ENSCHOG00000008741	-	57	87.956	Choloepus_hoffmanni
ENSFCAG00000011783	SMG5	93	76.166	ENSCPBG00000025848	SMG5	100	76.673	Chrysemys_picta_bellii
ENSFCAG00000011783	SMG5	93	34.635	ENSCING00000008706	-	99	34.012	Ciona_intestinalis
ENSFCAG00000011783	SMG5	100	89.577	ENSCANG00000029208	SMG5	100	90.551	Colobus_angolensis_palliatus
ENSFCAG00000011783	SMG5	100	90.275	ENSCGRG00001006336	Smg5	100	89.686	Cricetulus_griseus_chok1gshd
ENSFCAG00000011783	SMG5	98	90.141	ENSCGRG00000005111	Smg5	100	89.527	Cricetulus_griseus_crigri
ENSFCAG00000011783	SMG5	99	64.706	ENSCSEG00000014220	smg5	99	64.793	Cynoglossus_semilaevis
ENSFCAG00000011783	SMG5	99	59.902	ENSCVAG00000000529	smg5	99	60.392	Cyprinodon_variegatus
ENSFCAG00000011783	SMG5	99	60.328	ENSDARG00000041481	smg5	92	79.759	Danio_rerio
ENSFCAG00000011783	SMG5	92	37.021	ENSDNOG00000039862	-	100	36.383	Dasypus_novemcinctus
ENSFCAG00000011783	SMG5	100	89.086	ENSDNOG00000000051	SMG5	100	89.754	Dasypus_novemcinctus
ENSFCAG00000011783	SMG5	100	91.176	ENSDORG00000010382	Smg5	100	91.454	Dipodomys_ordii
ENSFCAG00000011783	SMG5	67	35.256	FBgn0019890	Smg5	62	35.256	Drosophila_melanogaster
ENSFCAG00000011783	SMG5	82	97.087	ENSETEG00000010336	SMG5	89	97.087	Echinops_telfairi
ENSFCAG00000011783	SMG5	90	46.872	ENSEBUG00000003739	smg5	98	45.714	Eptatretus_burgeri
ENSFCAG00000011783	SMG5	100	94.199	ENSEASG00005019122	SMG5	100	94.193	Equus_asinus_asinus
ENSFCAG00000011783	SMG5	100	94.199	ENSECAG00000001389	SMG5	100	94.193	Equus_caballus
ENSFCAG00000011783	SMG5	72	97.118	ENSEEUG00000012690	SMG5	73	97.118	Erinaceus_europaeus
ENSFCAG00000011783	SMG5	99	65.403	ENSELUG00000012585	smg5	99	64.995	Esox_lucius
ENSFCAG00000011783	SMG5	58	80.667	ENSFALG00000001166	-	99	80.667	Ficedula_albicollis
ENSFCAG00000011783	SMG5	98	91.835	ENSFDAG00000017388	SMG5	100	91.835	Fukomys_damarensis
ENSFCAG00000011783	SMG5	97	61.476	ENSFHEG00000013939	smg5	96	67.581	Fundulus_heteroclitus
ENSFCAG00000011783	SMG5	99	61.511	ENSGMOG00000007310	smg5	92	76.498	Gadus_morhua
ENSFCAG00000011783	SMG5	99	76.374	ENSGALG00000029918	-	100	75.905	Gallus_gallus
ENSFCAG00000011783	SMG5	86	75.342	ENSGAFG00000021691	smg5	97	66.134	Gambusia_affinis
ENSFCAG00000011783	SMG5	100	78.368	ENSGAGG00000016131	SMG5	100	77.799	Gopherus_agassizii
ENSFCAG00000011783	SMG5	100	93.117	ENSGGOG00000010932	SMG5	100	93.898	Gorilla_gorilla
ENSFCAG00000011783	SMG5	99	64.341	ENSHBUG00000008654	smg5	99	64.575	Haplochromis_burtoni
ENSFCAG00000011783	SMG5	100	91.650	ENSHGLG00000019152	SMG5	100	91.847	Heterocephalus_glaber_female
ENSFCAG00000011783	SMG5	90	91.447	ENSHGLG00100015948	SMG5	99	91.667	Heterocephalus_glaber_male
ENSFCAG00000011783	SMG5	87	71.838	ENSHCOG00000010229	smg5	92	72.993	Hippocampus_comes
ENSFCAG00000011783	SMG5	99	62.170	ENSIPUG00000006624	Smg5	99	62.340	Ictalurus_punctatus
ENSFCAG00000011783	SMG5	100	93.707	ENSSTOG00000001780	SMG5	100	94.094	Ictidomys_tridecemlineatus
ENSFCAG00000011783	SMG5	100	90.196	ENSJJAG00000022763	Smg5	100	89.804	Jaculus_jaculus
ENSFCAG00000011783	SMG5	91	77.672	ENSKMAG00000014586	smg5	93	78.673	Kryptolebias_marmoratus
ENSFCAG00000011783	SMG5	99	65.598	ENSLBEG00000002145	smg5	99	65.336	Labrus_bergylta
ENSFCAG00000011783	SMG5	100	63.844	ENSLACG00000010521	SMG5	100	63.749	Latimeria_chalumnae
ENSFCAG00000011783	SMG5	97	77.958	ENSLOCG00000008380	smg5	99	61.580	Lepisosteus_oculatus
ENSFCAG00000011783	SMG5	100	93.117	ENSLAFG00000006241	SMG5	100	93.117	Loxodonta_africana
ENSFCAG00000011783	SMG5	100	93.215	ENSMFAG00000045357	SMG5	100	93.898	Macaca_fascicularis
ENSFCAG00000011783	SMG5	100	93.215	ENSMMUG00000000090	SMG5	100	93.898	Macaca_mulatta
ENSFCAG00000011783	SMG5	100	93.117	ENSMNEG00000044425	SMG5	100	93.799	Macaca_nemestrina
ENSFCAG00000011783	SMG5	100	87.659	ENSMLEG00000041192	SMG5	100	87.647	Mandrillus_leucophaeus
ENSFCAG00000011783	SMG5	99	60.644	ENSMAMG00000010683	smg5	100	59.830	Mastacembelus_armatus
ENSFCAG00000011783	SMG5	99	63.549	ENSMZEG00005015815	smg5	99	63.443	Maylandia_zebra
ENSFCAG00000011783	SMG5	62	58.040	ENSMZEG00005016543	smg5	100	57.470	Maylandia_zebra
ENSFCAG00000011783	SMG5	100	89.391	ENSMAUG00000010381	Smg5	100	88.802	Mesocricetus_auratus
ENSFCAG00000011783	SMG5	100	93.314	ENSMICG00000002257	SMG5	100	94.094	Microcebus_murinus
ENSFCAG00000011783	SMG5	100	89.314	ENSMOCG00000016590	Smg5	100	88.824	Microtus_ochrogaster
ENSFCAG00000011783	SMG5	99	58.341	ENSMMOG00000017199	smg5	99	59.018	Mola_mola
ENSFCAG00000011783	SMG5	97	34.156	ENSMODG00000004511	-	99	33.562	Monodelphis_domestica
ENSFCAG00000011783	SMG5	76	37.028	ENSMODG00000010675	-	84	37.135	Monodelphis_domestica
ENSFCAG00000011783	SMG5	75	38.845	ENSMODG00000004735	-	86	38.933	Monodelphis_domestica
ENSFCAG00000011783	SMG5	93	37.376	ENSMODG00000004532	-	87	36.806	Monodelphis_domestica
ENSFCAG00000011783	SMG5	87	87.514	ENSMODG00000016901	SMG5	98	88.176	Monodelphis_domestica
ENSFCAG00000011783	SMG5	99	59.176	ENSMALG00000010375	smg5	99	58.740	Monopterus_albus
ENSFCAG00000011783	SMG5	100	90.570	MGP_CAROLIEiJ_G0025163	Smg5	100	98.324	Mus_caroli
ENSFCAG00000011783	SMG5	100	90.766	ENSMUSG00000001415	Smg5	99	98.324	Mus_musculus
ENSFCAG00000011783	SMG5	100	90.196	MGP_PahariEiJ_G0026606	Smg5	100	98.324	Mus_pahari
ENSFCAG00000011783	SMG5	100	90.570	MGP_SPRETEiJ_G0026104	Smg5	100	98.324	Mus_spretus
ENSFCAG00000011783	SMG5	93	95.455	ENSMPUG00000004546	SMG5	100	95.455	Mustela_putorius_furo
ENSFCAG00000011783	SMG5	100	92.043	ENSMLUG00000008518	SMG5	100	92.172	Myotis_lucifugus
ENSFCAG00000011783	SMG5	100	90.472	ENSNGAG00000020706	Smg5	100	91.052	Nannospalax_galili
ENSFCAG00000011783	SMG5	98	44.254	ENSNGAG00000012101	-	98	44.478	Nannospalax_galili
ENSFCAG00000011783	SMG5	96	62.854	ENSNBRG00000004332	smg5	98	63.434	Neolamprologus_brichardi
ENSFCAG00000011783	SMG5	100	92.920	ENSNLEG00000012439	SMG5	100	93.701	Nomascus_leucogenys
ENSFCAG00000011783	SMG5	100	86.627	ENSMEUG00000012834	SMG5	100	87.021	Notamacropus_eugenii
ENSFCAG00000011783	SMG5	100	91.642	ENSOPRG00000009152	SMG5	100	91.937	Ochotona_princeps
ENSFCAG00000011783	SMG5	100	92.724	ENSODEG00000012237	SMG5	100	93.412	Octodon_degus
ENSFCAG00000011783	SMG5	98	93.152	ENSOCUG00000012886	SMG5	100	93.750	Oryctolagus_cuniculus
ENSFCAG00000011783	SMG5	89	40.904	ENSOCUG00000023338	-	99	40.353	Oryctolagus_cuniculus
ENSFCAG00000011783	SMG5	99	63.930	ENSORLG00020013127	smg5	99	65.064	Oryzias_latipes_hni
ENSFCAG00000011783	SMG5	99	63.840	ENSORLG00015019014	smg5	99	65.362	Oryzias_latipes_hsok
ENSFCAG00000011783	SMG5	100	93.307	ENSOGAG00000004966	SMG5	100	93.412	Otolemur_garnettii
ENSFCAG00000011783	SMG5	99	44.195	ENSOARG00000011963	-	99	43.988	Ovis_aries
ENSFCAG00000011783	SMG5	100	93.904	ENSOARG00000005778	SMG5	100	93.799	Ovis_aries
ENSFCAG00000011783	SMG5	100	93.019	ENSPPAG00000011996	SMG5	100	93.799	Pan_paniscus
ENSFCAG00000011783	SMG5	98	99.696	ENSPPRG00000011901	SMG5	100	99.696	Panthera_pardus
ENSFCAG00000011783	SMG5	99	90.809	ENSPTIG00000007892	SMG5	98	91.455	Panthera_tigris_altaica
ENSFCAG00000011783	SMG5	100	93.215	ENSPTRG00000023925	SMG5	100	93.996	Pan_troglodytes
ENSFCAG00000011783	SMG5	100	93.215	ENSPTRG00000049282	-	100	93.996	Pan_troglodytes
ENSFCAG00000011783	SMG5	100	93.314	ENSPANG00000011201	SMG5	100	93.996	Papio_anubis
ENSFCAG00000011783	SMG5	99	65.787	ENSPKIG00000009402	smg5	99	65.914	Paramormyrops_kingsleyae
ENSFCAG00000011783	SMG5	98	78.593	ENSPSIG00000015198	SMG5	100	78.791	Pelodiscus_sinensis
ENSFCAG00000011783	SMG5	99	60.037	ENSPMGG00000010465	smg5	99	59.907	Periophthalmus_magnuspinnatus
ENSFCAG00000011783	SMG5	56	46.208	ENSPEMG00000010022	-	95	44.983	Peromyscus_maniculatus_bairdii
ENSFCAG00000011783	SMG5	100	90.275	ENSPEMG00000001819	Smg5	100	89.686	Peromyscus_maniculatus_bairdii
ENSFCAG00000011783	SMG5	99	50.532	ENSPMAG00000000410	smg5	100	50.142	Petromyzon_marinus
ENSFCAG00000011783	SMG5	100	87.623	ENSPCIG00000018938	SMG5	100	88.212	Phascolarctos_cinereus
ENSFCAG00000011783	SMG5	50	60.223	ENSPFOG00000010191	smg5	99	62.084	Poecilia_formosa
ENSFCAG00000011783	SMG5	50	59.740	ENSPLAG00000009332	smg5	99	62.174	Poecilia_latipinna
ENSFCAG00000011783	SMG5	93	75.000	ENSPMEG00000014105	smg5	99	65.736	Poecilia_mexicana
ENSFCAG00000011783	SMG5	93	75.000	ENSPREG00000017713	smg5	99	61.905	Poecilia_reticulata
ENSFCAG00000011783	SMG5	100	93.314	ENSPPYG00000000723	SMG5	100	94.094	Pongo_abelii
ENSFCAG00000011783	SMG5	75	94.475	ENSPCAG00000008412	SMG5	88	84.810	Procavia_capensis
ENSFCAG00000011783	SMG5	100	93.314	ENSPCOG00000004741	SMG5	100	94.094	Propithecus_coquereli
ENSFCAG00000011783	SMG5	100	85.039	ENSPVAG00000016748	SMG5	100	85.039	Pteropus_vampyrus
ENSFCAG00000011783	SMG5	99	60.018	ENSPNYG00000013397	smg5	99	59.769	Pundamilia_nyererei
ENSFCAG00000011783	SMG5	99	62.170	ENSPNAG00000028363	smg5	99	62.113	Pygocentrus_nattereri
ENSFCAG00000011783	SMG5	100	91.061	ENSRNOG00000019590	Smg5	100	90.472	Rattus_norvegicus
ENSFCAG00000011783	SMG5	100	93.314	ENSRBIG00000027428	SMG5	100	93.996	Rhinopithecus_bieti
ENSFCAG00000011783	SMG5	100	93.215	ENSRROG00000030035	SMG5	100	93.898	Rhinopithecus_roxellana
ENSFCAG00000011783	SMG5	100	93.314	ENSSBOG00000033339	SMG5	100	94.094	Saimiri_boliviensis_boliviensis
ENSFCAG00000011783	SMG5	87	40.420	ENSSHAG00000000561	-	86	40.420	Sarcophilus_harrisii
ENSFCAG00000011783	SMG5	99	33.754	ENSSHAG00000009572	-	99	33.333	Sarcophilus_harrisii
ENSFCAG00000011783	SMG5	98	87.000	ENSSHAG00000014163	SMG5	100	87.588	Sarcophilus_harrisii
ENSFCAG00000011783	SMG5	65	38.889	ENSSHAG00000000935	-	80	40.617	Sarcophilus_harrisii
ENSFCAG00000011783	SMG5	99	66.306	ENSSFOG00015024175	smg5	99	65.820	Scleropages_formosus
ENSFCAG00000011783	SMG5	99	60.143	ENSSMAG00000013059	smg5	99	61.091	Scophthalmus_maximus
ENSFCAG00000011783	SMG5	99	59.716	ENSSDUG00000007122	smg5	99	60.426	Seriola_dumerili
ENSFCAG00000011783	SMG5	99	60.018	ENSSLDG00000011418	smg5	99	60.730	Seriola_lalandi_dorsalis
ENSFCAG00000011783	SMG5	90	80.480	ENSSARG00000012484	SMG5	100	80.480	Sorex_araneus
ENSFCAG00000011783	SMG5	93	76.494	ENSSPUG00000002260	SMG5	100	76.190	Sphenodon_punctatus
ENSFCAG00000011783	SMG5	92	75.751	ENSSPAG00000014266	smg5	98	65.162	Stegastes_partitus
ENSFCAG00000011783	SMG5	99	73.492	ENSSSCG00000039308	-	100	73.689	Sus_scrofa
ENSFCAG00000011783	SMG5	100	95.280	ENSSSCG00000006490	-	100	95.276	Sus_scrofa
ENSFCAG00000011783	SMG5	99	79.031	ENSTGUG00000003748	-	100	78.711	Taeniopygia_guttata
ENSFCAG00000011783	SMG5	99	62.813	ENSTRUG00000012580	smg5	92	75.352	Takifugu_rubripes
ENSFCAG00000011783	SMG5	99	64.008	ENSTNIG00000010303	smg5	92	74.596	Tetraodon_nigroviridis
ENSFCAG00000011783	SMG5	60	98.522	ENSTBEG00000002777	SMG5	60	98.522	Tupaia_belangeri
ENSFCAG00000011783	SMG5	100	89.665	ENSTTRG00000001401	SMG5	100	89.665	Tursiops_truncatus
ENSFCAG00000011783	SMG5	100	96.640	ENSUAMG00000013721	SMG5	100	96.640	Ursus_americanus
ENSFCAG00000011783	SMG5	98	91.726	ENSUMAG00000018041	SMG5	97	91.726	Ursus_maritimus
ENSFCAG00000011783	SMG5	98	85.484	ENSVPAG00000009446	SMG5	99	85.469	Vicugna_pacos
ENSFCAG00000011783	SMG5	100	97.036	ENSVVUG00000005887	SMG5	100	97.036	Vulpes_vulpes
ENSFCAG00000011783	SMG5	76	65.195	ENSXETG00000033791	SMG5	99	64.565	Xenopus_tropicalis
ENSFCAG00000011783	SMG5	60	76.334	ENSXCOG00000004379	smg5	96	69.231	Xiphophorus_couchianus
ENSFCAG00000011783	SMG5	99	65.078	ENSXMAG00000013499	smg5	99	65.631	Xiphophorus_maculatus