EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000012399 (Gene tree)
Gene ID: 101080787
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 165252 bases
Position: chrB1:173904131-174069382
Accession: 101080787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000011501	RRM_1	PF00076.22	1.8e-37	1	3
ENSFCAP00000011501	RRM_1	PF00076.22	1.8e-37	2	3
ENSFCAP00000011501	RRM_1	PF00076.22	1.8e-37	3	3
ENSFCAP00000031732	RRM_1	PF00076.22	1.8e-37	1	3
ENSFCAP00000031732	RRM_1	PF00076.22	1.8e-37	2	3
ENSFCAP00000031732	RRM_1	PF00076.22	1.8e-37	3	3
ENSFCAP00000032255	RRM_1	PF00076.22	1.8e-37	1	3
ENSFCAP00000032255	RRM_1	PF00076.22	1.8e-37	2	3
ENSFCAP00000032255	RRM_1	PF00076.22	1.8e-37	3	3
ENSFCAP00000036276	RRM_1	PF00076.22	1.8e-37	1	3
ENSFCAP00000036276	RRM_1	PF00076.22	1.8e-37	2	3
ENSFCAP00000036276	RRM_1	PF00076.22	1.8e-37	3	3
ENSFCAP00000044169	RRM_1	PF00076.22	1.8e-37	1	3
ENSFCAP00000044169	RRM_1	PF00076.22	1.8e-37	2	3
ENSFCAP00000044169	RRM_1	PF00076.22	1.8e-37	3	3
ENSFCAP00000048468	RRM_1	PF00076.22	1.8e-37	1	3
ENSFCAP00000048468	RRM_1	PF00076.22	1.8e-37	2	3
ENSFCAP00000048468	RRM_1	PF00076.22	1.8e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000056970	RBM47-205	6768	XM_019829606	ENSFCAP00000044169	589 (aa)	XP_019685165	UPI000298D664
ENSFCAT00000038612	RBM47-204	6801	-	ENSFCAP00000031732	589 (aa)	-	M3WGV1
ENSFCAT00000038073	RBM47-201	6702	XM_019829604	ENSFCAP00000032255	589 (aa)	XP_019685163	M3WGV1
ENSFCAT00000012401	RBM47-203	6429	-	ENSFCAP00000011501	589 (aa)	-	M3WGV1
ENSFCAT00000042672	RBM47-206	6094	-	ENSFCAP00000036276	589 (aa)	-	M3WGV1
ENSFCAT00000060626	RBM47-202	6576	-	ENSFCAP00000048468	589 (aa)	-	UPI000298D664

Gene Model

Click here to download ENSFCAG00000012399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000012399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000012399	RBM47	52	56.129	ENSFCAG00000019123	HNRNPR	73	45.695
ENSFCAG00000012399	RBM47	52	54.516	ENSFCAG00000023146	SYNCRIP	79	46.292
ENSFCAG00000012399	RBM47	77	57.783	ENSFCAG00000011179	A1CF	74	59.551
ENSFCAG00000012399	RBM47	51	74.333	ENSFCAG00000029812	RBM46	64	74.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000012399	RBM47	100	96.633	ENSG00000163694	RBM47	100	99.115	Homo_sapiens
ENSFCAG00000012399	RBM47	100	78.057	ENSAPOG00000011062	rbm47	93	84.225	Acanthochromis_polyacanthus
ENSFCAG00000012399	RBM47	100	96.812	ENSAMEG00000009672	RBM47	100	96.812	Ailuropoda_melanoleuca
ENSFCAG00000012399	RBM47	100	77.946	ENSACIG00000011531	rbm47	100	76.599	Amphilophus_citrinellus
ENSFCAG00000012399	RBM47	100	78.788	ENSAOCG00000022245	rbm47	100	77.441	Amphiprion_ocellaris
ENSFCAG00000012399	RBM47	100	78.583	ENSAPEG00000018304	rbm47	100	77.234	Amphiprion_percula
ENSFCAG00000012399	RBM47	100	77.632	ENSATEG00000018400	rbm47	94	78.397	Anabas_testudineus
ENSFCAG00000012399	RBM47	100	88.027	ENSAPLG00000013974	RBM47	100	88.027	Anas_platyrhynchos
ENSFCAG00000012399	RBM47	100	85.810	ENSACAG00000011833	RBM47	100	85.977	Anolis_carolinensis
ENSFCAG00000012399	RBM47	100	96.296	ENSANAG00000029440	RBM47	100	96.296	Aotus_nancymaae
ENSFCAG00000012399	RBM47	100	76.393	ENSACLG00000016902	rbm47	94	84.789	Astatotilapia_calliptera
ENSFCAG00000012399	RBM47	100	76.151	ENSAMXG00000021794	rbm47	95	78.125	Astyanax_mexicanus
ENSFCAG00000012399	RBM47	100	98.308	ENSBTAG00000002356	RBM47	100	98.308	Bos_taurus
ENSFCAG00000012399	RBM47	100	95.966	ENSCJAG00000019385	RBM47	100	95.966	Callithrix_jacchus
ENSFCAG00000012399	RBM47	96	94.903	ENSCAFG00000015898	RBM47	100	94.604	Canis_familiaris
ENSFCAG00000012399	RBM47	87	95.331	ENSCAFG00020010558	RBM47	94	95.225	Canis_lupus_dingo
ENSFCAG00000012399	RBM47	100	98.646	ENSCHIG00000026214	RBM47	100	98.646	Capra_hircus
ENSFCAG00000012399	RBM47	86	78.978	ENSTSYG00000033612	RBM47	92	89.381	Carlito_syrichta
ENSFCAG00000012399	RBM47	100	89.020	ENSCAPG00000008426	RBM47	100	89.696	Cavia_aperea
ENSFCAG00000012399	RBM47	100	96.791	ENSCPOG00000014100	RBM47	100	96.791	Cavia_porcellus
ENSFCAG00000012399	RBM47	99	67.399	ENSCCAG00000024397	-	99	65.541	Cebus_capucinus
ENSFCAG00000012399	RBM47	100	95.966	ENSCCAG00000030129	-	100	95.966	Cebus_capucinus
ENSFCAG00000012399	RBM47	100	97.284	ENSCATG00000042064	RBM47	100	97.284	Cercocebus_atys
ENSFCAG00000012399	RBM47	100	94.755	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSFCAG00000012399	RBM47	100	96.801	ENSCSAG00000017060	RBM47	100	96.801	Chlorocebus_sabaeus
ENSFCAG00000012399	RBM47	89	94.937	ENSCHOG00000011731	RBM47	88	94.937	Choloepus_hoffmanni
ENSFCAG00000012399	RBM47	100	90.436	ENSCPBG00000013831	RBM47	100	90.604	Chrysemys_picta_bellii
ENSFCAG00000012399	RBM47	100	97.114	ENSCANG00000019997	RBM47	100	97.114	Colobus_angolensis_palliatus
ENSFCAG00000012399	RBM47	100	66.105	ENSCGRG00001020102	-	100	73.729	Cricetulus_griseus_chok1gshd
ENSFCAG00000012399	RBM47	100	92.617	ENSCGRG00001000623	-	100	92.617	Cricetulus_griseus_chok1gshd
ENSFCAG00000012399	RBM47	100	65.767	ENSCGRG00000014760	-	100	73.390	Cricetulus_griseus_crigri
ENSFCAG00000012399	RBM47	100	91.779	ENSCGRG00000007762	-	100	93.671	Cricetulus_griseus_crigri
ENSFCAG00000012399	RBM47	100	76.007	ENSCSEG00000004545	rbm47	100	74.329	Cynoglossus_semilaevis
ENSFCAG00000012399	RBM47	100	76.728	ENSCVAG00000020144	rbm47	93	84.463	Cyprinodon_variegatus
ENSFCAG00000012399	RBM47	100	77.558	ENSDARG00000061985	rbm47	95	78.883	Danio_rerio
ENSFCAG00000012399	RBM47	100	96.610	ENSDNOG00000046854	RBM47	100	96.610	Dasypus_novemcinctus
ENSFCAG00000012399	RBM47	100	94.975	ENSDORG00000010144	Rbm47	100	94.975	Dipodomys_ordii
ENSFCAG00000012399	RBM47	100	94.966	ENSETEG00000009194	RBM47	100	94.966	Echinops_telfairi
ENSFCAG00000012399	RBM47	99	57.143	ENSEBUG00000011912	rbm47	95	59.860	Eptatretus_burgeri
ENSFCAG00000012399	RBM47	100	98.816	ENSEASG00005008443	RBM47	100	98.816	Equus_asinus_asinus
ENSFCAG00000012399	RBM47	100	98.816	ENSECAG00000004400	RBM47	100	98.816	Equus_caballus
ENSFCAG00000012399	RBM47	75	96.970	ENSEEUG00000001194	RBM47	75	96.970	Erinaceus_europaeus
ENSFCAG00000012399	RBM47	99	76.342	ENSELUG00000006148	rbm47	93	85.237	Esox_lucius
ENSFCAG00000012399	RBM47	100	90.588	ENSFALG00000002861	RBM47	100	90.924	Ficedula_albicollis
ENSFCAG00000012399	RBM47	100	94.576	ENSFDAG00000016326	RBM47	100	94.068	Fukomys_damarensis
ENSFCAG00000012399	RBM47	100	77.609	ENSFHEG00000007938	rbm47	100	75.084	Fundulus_heteroclitus
ENSFCAG00000012399	RBM47	100	74.959	ENSGMOG00000014802	rbm47	94	76.736	Gadus_morhua
ENSFCAG00000012399	RBM47	64	92.287	ENSGALG00000014267	RBM47	100	92.042	Gallus_gallus
ENSFCAG00000012399	RBM47	64	83.200	ENSGAFG00000020571	rbm47	98	80.319	Gambusia_affinis
ENSFCAG00000012399	RBM47	100	74.590	ENSGACG00000016223	rbm47	93	82.535	Gasterosteus_aculeatus
ENSFCAG00000012399	RBM47	100	90.604	ENSGAGG00000020051	RBM47	100	90.772	Gopherus_agassizii
ENSFCAG00000012399	RBM47	100	97.284	ENSGGOG00000001367	RBM47	100	97.284	Gorilla_gorilla
ENSFCAG00000012399	RBM47	100	76.144	ENSHBUG00000003520	rbm47	94	84.789	Haplochromis_burtoni
ENSFCAG00000012399	RBM47	84	89.431	ENSHGLG00000016914	RBM47	100	95.570	Heterocephalus_glaber_female
ENSFCAG00000012399	RBM47	100	93.729	ENSHGLG00100014028	-	100	95.570	Heterocephalus_glaber_male
ENSFCAG00000012399	RBM47	100	84.237	ENSHGLG00100003071	-	100	84.237	Heterocephalus_glaber_male
ENSFCAG00000012399	RBM47	99	77.609	ENSHCOG00000002074	rbm47	93	85.634	Hippocampus_comes
ENSFCAG00000012399	RBM47	100	78.415	ENSIPUG00000004743	rbm47	97	79.438	Ictalurus_punctatus
ENSFCAG00000012399	RBM47	100	96.471	ENSSTOG00000004727	RBM47	100	96.471	Ictidomys_tridecemlineatus
ENSFCAG00000012399	RBM47	100	95.470	ENSJJAG00000013823	Rbm47	100	95.470	Jaculus_jaculus
ENSFCAG00000012399	RBM47	100	79.062	ENSKMAG00000000084	rbm47	100	77.013	Kryptolebias_marmoratus
ENSFCAG00000012399	RBM47	100	77.273	ENSLBEG00000008436	rbm47	93	83.662	Labrus_bergylta
ENSFCAG00000012399	RBM47	100	86.678	ENSLACG00000007196	RBM47	100	85.160	Latimeria_chalumnae
ENSFCAG00000012399	RBM47	100	83.137	ENSLOCG00000012966	rbm47	95	81.450	Lepisosteus_oculatus
ENSFCAG00000012399	RBM47	100	95.455	ENSLAFG00000011998	RBM47	100	95.455	Loxodonta_africana
ENSFCAG00000012399	RBM47	100	97.284	ENSMFAG00000037967	RBM47	100	97.284	Macaca_fascicularis
ENSFCAG00000012399	RBM47	100	96.801	ENSMMUG00000012036	RBM47	100	98.964	Macaca_mulatta
ENSFCAG00000012399	RBM47	100	97.284	ENSMNEG00000040774	RBM47	100	97.284	Macaca_nemestrina
ENSFCAG00000012399	RBM47	100	99.048	ENSMLEG00000041432	RBM47	100	99.048	Mandrillus_leucophaeus
ENSFCAG00000012399	RBM47	100	77.100	ENSMAMG00000019143	rbm47	94	81.067	Mastacembelus_armatus
ENSFCAG00000012399	RBM47	100	76.393	ENSMZEG00005023659	rbm47	95	77.855	Maylandia_zebra
ENSFCAG00000012399	RBM47	100	89.967	ENSMGAG00000012226	RBM47	100	89.799	Meleagris_gallopavo
ENSFCAG00000012399	RBM47	100	93.109	ENSMAUG00000006493	Rbm47	100	93.671	Mesocricetus_auratus
ENSFCAG00000012399	RBM47	100	90.153	ENSMICG00000026417	RBM47	100	91.681	Microcebus_murinus
ENSFCAG00000012399	RBM47	100	93.939	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSFCAG00000012399	RBM47	100	77.430	ENSMMOG00000007260	rbm47	95	78.571	Mola_mola
ENSFCAG00000012399	RBM47	100	91.723	ENSMODG00000007003	RBM47	100	91.892	Monodelphis_domestica
ENSFCAG00000012399	RBM47	52	82.051	ENSMODG00000015426	-	97	79.743	Monodelphis_domestica
ENSFCAG00000012399	RBM47	100	82.343	ENSMODG00000020561	-	100	82.003	Monodelphis_domestica
ENSFCAG00000012399	RBM47	100	77.479	ENSMALG00000005167	rbm47	94	84.225	Monopterus_albus
ENSFCAG00000012399	RBM47	100	93.423	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.761	Mus_caroli
ENSFCAG00000012399	RBM47	100	93.761	ENSMUSG00000070780	Rbm47	100	94.098	Mus_musculus
ENSFCAG00000012399	RBM47	100	93.761	MGP_PahariEiJ_G0017040	Rbm47	100	94.098	Mus_pahari
ENSFCAG00000012399	RBM47	100	94.237	MGP_SPRETEiJ_G0028253	Rbm47	100	94.576	Mus_spretus
ENSFCAG00000012399	RBM47	100	97.808	ENSMPUG00000006177	RBM47	94	97.808	Mustela_putorius_furo
ENSFCAG00000012399	RBM47	100	94.416	ENSMLUG00000000889	RBM47	100	94.755	Myotis_lucifugus
ENSFCAG00000012399	RBM47	100	93.782	ENSNGAG00000003325	Rbm47	100	94.286	Nannospalax_galili
ENSFCAG00000012399	RBM47	100	76.596	ENSNBRG00000015092	rbm47	95	77.893	Neolamprologus_brichardi
ENSFCAG00000012399	RBM47	100	96.944	ENSNLEG00000017151	RBM47	100	96.944	Nomascus_leucogenys
ENSFCAG00000012399	RBM47	72	87.354	ENSMEUG00000009516	-	99	87.500	Notamacropus_eugenii
ENSFCAG00000012399	RBM47	75	96.680	ENSOPRG00000016507	-	75	96.680	Ochotona_princeps
ENSFCAG00000012399	RBM47	100	96.785	ENSODEG00000004873	RBM47	100	96.785	Octodon_degus
ENSFCAG00000012399	RBM47	100	76.885	ENSONIG00000009061	rbm47	94	77.565	Oreochromis_niloticus
ENSFCAG00000012399	RBM47	100	87.919	ENSOANG00000008978	RBM47	100	88.926	Ornithorhynchus_anatinus
ENSFCAG00000012399	RBM47	100	96.277	ENSOCUG00000012034	RBM47	100	96.277	Oryctolagus_cuniculus
ENSFCAG00000012399	RBM47	100	78.319	ENSORLG00000005847	rbm47	94	83.662	Oryzias_latipes
ENSFCAG00000012399	RBM47	100	78.487	ENSORLG00020005154	rbm47	94	83.662	Oryzias_latipes_hni
ENSFCAG00000012399	RBM47	100	78.824	ENSORLG00015000066	rbm47	94	83.944	Oryzias_latipes_hsok
ENSFCAG00000012399	RBM47	100	79.630	ENSOMEG00000010730	rbm47	100	76.639	Oryzias_melastigma
ENSFCAG00000012399	RBM47	100	88.455	ENSOGAG00000025193	-	100	88.795	Otolemur_garnettii
ENSFCAG00000012399	RBM47	100	96.796	ENSOGAG00000029367	-	100	96.796	Otolemur_garnettii
ENSFCAG00000012399	RBM47	100	89.679	ENSOARG00000012711	RBM47	100	89.679	Ovis_aries
ENSFCAG00000012399	RBM47	100	97.114	ENSPPAG00000029763	RBM47	100	97.114	Pan_paniscus
ENSFCAG00000012399	RBM47	100	96.435	ENSPPRG00000012873	RBM47	100	96.435	Panthera_pardus
ENSFCAG00000012399	RBM47	85	95.800	ENSPTIG00000017046	RBM47	100	95.800	Panthera_tigris_altaica
ENSFCAG00000012399	RBM47	100	97.284	ENSPTRG00000016006	RBM47	100	97.284	Pan_troglodytes
ENSFCAG00000012399	RBM47	100	97.284	ENSPANG00000005980	RBM47	100	97.284	Papio_anubis
ENSFCAG00000012399	RBM47	96	76.132	ENSPKIG00000013431	RBM47	100	72.605	Paramormyrops_kingsleyae
ENSFCAG00000012399	RBM47	96	78.284	ENSPKIG00000005037	rbm47	95	77.583	Paramormyrops_kingsleyae
ENSFCAG00000012399	RBM47	89	90.720	ENSPSIG00000017516	RBM47	97	90.720	Pelodiscus_sinensis
ENSFCAG00000012399	RBM47	100	76.599	ENSPMGG00000018540	rbm47	100	74.916	Periophthalmus_magnuspinnatus
ENSFCAG00000012399	RBM47	100	93.950	ENSPEMG00000011088	Rbm47	100	94.622	Peromyscus_maniculatus_bairdii
ENSFCAG00000012399	RBM47	100	76.873	ENSPFOG00000007997	rbm47	94	77.470	Poecilia_formosa
ENSFCAG00000012399	RBM47	100	76.835	ENSPLAG00000002072	rbm47	100	80.267	Poecilia_latipinna
ENSFCAG00000012399	RBM47	100	78.763	ENSPMEG00000017492	rbm47	93	83.898	Poecilia_mexicana
ENSFCAG00000012399	RBM47	96	80.382	ENSPREG00000008456	rbm47	100	80.533	Poecilia_reticulata
ENSFCAG00000012399	RBM47	98	82.064	ENSPPYG00000014688	RBM47	98	81.615	Pongo_abelii
ENSFCAG00000012399	RBM47	81	97.000	ENSPCAG00000011879	RBM47	81	97.000	Procavia_capensis
ENSFCAG00000012399	RBM47	100	93.548	ENSPCOG00000023451	RBM47	100	94.397	Propithecus_coquereli
ENSFCAG00000012399	RBM47	100	96.801	ENSPVAG00000003812	RBM47	100	96.801	Pteropus_vampyrus
ENSFCAG00000012399	RBM47	100	76.183	ENSPNYG00000022868	rbm47	95	77.625	Pundamilia_nyererei
ENSFCAG00000012399	RBM47	100	76.974	ENSPNAG00000007940	rbm47	95	78.819	Pygocentrus_nattereri
ENSFCAG00000012399	RBM47	100	93.929	ENSRNOG00000002408	Rbm47	100	94.266	Rattus_norvegicus
ENSFCAG00000012399	RBM47	100	97.114	ENSRBIG00000039601	RBM47	100	97.114	Rhinopithecus_bieti
ENSFCAG00000012399	RBM47	100	97.114	ENSRROG00000044696	RBM47	100	97.114	Rhinopithecus_roxellana
ENSFCAG00000012399	RBM47	100	92.869	ENSSBOG00000028475	RBM47	100	96.488	Saimiri_boliviensis_boliviensis
ENSFCAG00000012399	RBM47	100	92.034	ENSSHAG00000017576	RBM47	100	92.203	Sarcophilus_harrisii
ENSFCAG00000012399	RBM47	100	75.294	ENSSFOG00015024101	RBM47	97	76.696	Scleropages_formosus
ENSFCAG00000012399	RBM47	100	74.129	ENSSFOG00015012445	rbm47	94	75.263	Scleropages_formosus
ENSFCAG00000012399	RBM47	100	75.862	ENSSMAG00000009744	rbm47	94	82.254	Scophthalmus_maximus
ENSFCAG00000012399	RBM47	100	79.461	ENSSDUG00000022684	rbm47	100	77.273	Seriola_dumerili
ENSFCAG00000012399	RBM47	100	79.461	ENSSLDG00000003109	rbm47	100	76.936	Seriola_lalandi_dorsalis
ENSFCAG00000012399	RBM47	85	95.759	ENSSARG00000001735	RBM47	75	95.759	Sorex_araneus
ENSFCAG00000012399	RBM47	100	88.027	ENSSPUG00000007515	RBM47	100	89.333	Sphenodon_punctatus
ENSFCAG00000012399	RBM47	100	79.798	ENSSPAG00000001257	rbm47	93	85.070	Stegastes_partitus
ENSFCAG00000012399	RBM47	100	98.139	ENSSSCG00000008796	RBM47	100	98.139	Sus_scrofa
ENSFCAG00000012399	RBM47	100	90.236	ENSTGUG00000008705	RBM47	100	90.572	Taeniopygia_guttata
ENSFCAG00000012399	RBM47	100	77.311	ENSTRUG00000014050	rbm47	100	75.630	Takifugu_rubripes
ENSFCAG00000012399	RBM47	100	76.809	ENSTNIG00000006127	rbm47	95	78.261	Tetraodon_nigroviridis
ENSFCAG00000012399	RBM47	77	92.405	ENSTBEG00000001607	RBM47	76	92.405	Tupaia_belangeri
ENSFCAG00000012399	RBM47	100	97.458	ENSTTRG00000002839	RBM47	100	97.458	Tursiops_truncatus
ENSFCAG00000012399	RBM47	100	97.639	ENSUAMG00000021346	RBM47	100	97.639	Ursus_americanus
ENSFCAG00000012399	RBM47	57	100.000	ENSVPAG00000000641	-	57	100.000	Vicugna_pacos
ENSFCAG00000012399	RBM47	96	95.423	ENSVVUG00000014774	RBM47	100	94.764	Vulpes_vulpes
ENSFCAG00000012399	RBM47	100	86.003	ENSXETG00000012802	rbm47	100	85.666	Xenopus_tropicalis
ENSFCAG00000012399	RBM47	88	82.933	ENSXCOG00000000780	rbm47	100	80.267	Xiphophorus_couchianus
ENSFCAG00000012399	RBM47	100	77.647	ENSXMAG00000009874	rbm47	93	83.616	Xiphophorus_maculatus