EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000012678 (Gene tree)
Gene ID: 101092053
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 32377 bases
Position: chrD2:32030104-32062480
Accession: 101092053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000023971	GUCT	PF08152.12	8.1e-28	1	1
ENSFCAP00000023971	ResIII	PF04851.15	4.3e-10	1	1
ENSFCAP00000023971	DEAD	PF00270.29	2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000027815	DDX50-201	2942	XM_003993993	ENSFCAP00000023971	739 (aa)	XP_003994042	M3XBG7

Gene Model

Click here to download ENSFCAG00000012678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000012678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000012678	DDX50	53	31.566	ENSFCAG00000013990	DDX47	76	32.514
ENSFCAG00000012678	DDX50	50	31.536	ENSFCAG00000013883	EIF4A2	90	30.904
ENSFCAG00000012678	DDX50	50	32.888	ENSFCAG00000008246	EIF4A3	86	32.888
ENSFCAG00000012678	DDX50	57	33.181	ENSFCAG00000000753	DDX18	62	33.181
ENSFCAG00000012678	DDX50	50	32.533	ENSFCAG00000024897	EIF4A1	88	31.989
ENSFCAG00000012678	DDX50	58	30.263	ENSFCAG00000001448	DDX27	52	32.864
ENSFCAG00000012678	DDX50	82	67.710	ENSFCAG00000002109	DDX21	75	68.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000012678	DDX50	99	98.238	ENSG00000107625	DDX50	100	98.238	Homo_sapiens
ENSFCAG00000012678	DDX50	99	98.780	ENSAMEG00000017992	DDX50	100	98.780	Ailuropoda_melanoleuca
ENSFCAG00000012678	DDX50	92	78.035	ENSANAG00000017785	-	91	78.035	Aotus_nancymaae
ENSFCAG00000012678	DDX50	99	97.832	ENSBTAG00000033413	DDX50	100	97.832	Bos_taurus
ENSFCAG00000012678	DDX50	99	98.374	ENSCJAG00000018844	DDX50	100	98.374	Callithrix_jacchus
ENSFCAG00000012678	DDX50	99	99.322	ENSCAFG00000013776	DDX50	100	99.322	Canis_familiaris
ENSFCAG00000012678	DDX50	100	99.323	ENSCAFG00020025977	DDX50	100	99.323	Canis_lupus_dingo
ENSFCAG00000012678	DDX50	100	97.564	ENSCHIG00000000285	DDX50	100	97.564	Capra_hircus
ENSFCAG00000012678	DDX50	99	97.561	ENSTSYG00000004192	DDX50	100	97.561	Carlito_syrichta
ENSFCAG00000012678	DDX50	88	78.825	ENSCAPG00000007230	-	87	78.802	Cavia_aperea
ENSFCAG00000012678	DDX50	99	96.341	ENSCPOG00000002131	-	100	96.341	Cavia_porcellus
ENSFCAG00000012678	DDX50	91	89.286	ENSCCAG00000030543	DDX50	100	89.286	Cebus_capucinus
ENSFCAG00000012678	DDX50	99	66.532	ENSCATG00000039259	-	89	67.742	Cercocebus_atys
ENSFCAG00000012678	DDX50	99	95.929	ENSCATG00000032463	DDX50	99	95.929	Cercocebus_atys
ENSFCAG00000012678	DDX50	97	72.476	ENSCATG00000035153	-	89	89.655	Cercocebus_atys
ENSFCAG00000012678	DDX50	96	71.108	ENSCLAG00000001938	-	91	71.865	Chinchilla_lanigera
ENSFCAG00000012678	DDX50	50	87.534	ENSCLAG00000001553	-	79	88.710	Chinchilla_lanigera
ENSFCAG00000012678	DDX50	99	97.696	ENSCLAG00000012957	-	100	97.696	Chinchilla_lanigera
ENSFCAG00000012678	DDX50	99	98.374	ENSCSAG00000007703	DDX50	100	98.374	Chlorocebus_sabaeus
ENSFCAG00000012678	DDX50	90	95.352	ENSCHOG00000000233	DDX50	100	95.352	Choloepus_hoffmanni
ENSFCAG00000012678	DDX50	99	84.417	ENSCANG00000036450	-	100	84.417	Colobus_angolensis_palliatus
ENSFCAG00000012678	DDX50	86	72.397	ENSCANG00000018820	-	88	73.217	Colobus_angolensis_palliatus
ENSFCAG00000012678	DDX50	96	69.134	ENSCANG00000028077	-	91	68.567	Colobus_angolensis_palliatus
ENSFCAG00000012678	DDX50	92	95.434	ENSCGRG00001020223	Ddx50	92	95.434	Cricetulus_griseus_chok1gshd
ENSFCAG00000012678	DDX50	91	95.562	ENSCGRG00000015884	Ddx50	92	95.434	Cricetulus_griseus_crigri
ENSFCAG00000012678	DDX50	87	89.985	ENSDNOG00000001675	DDX50	100	89.985	Dasypus_novemcinctus
ENSFCAG00000012678	DDX50	99	96.883	ENSDORG00000007310	Ddx50	100	96.883	Dipodomys_ordii
ENSFCAG00000012678	DDX50	90	97.566	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSFCAG00000012678	DDX50	100	98.106	ENSEASG00005015595	DDX50	100	98.106	Equus_asinus_asinus
ENSFCAG00000012678	DDX50	100	98.241	ENSECAG00000023044	DDX50	100	98.241	Equus_caballus
ENSFCAG00000012678	DDX50	89	96.552	ENSEEUG00000005782	DDX50	81	98.413	Erinaceus_europaeus
ENSFCAG00000012678	DDX50	92	89.396	ENSFDAG00000016109	-	91	89.396	Fukomys_damarensis
ENSFCAG00000012678	DDX50	51	82.275	ENSGGOG00000041063	-	82	84.953	Gorilla_gorilla
ENSFCAG00000012678	DDX50	52	71.094	ENSGGOG00000022568	-	90	79.503	Gorilla_gorilla
ENSFCAG00000012678	DDX50	99	98.238	ENSGGOG00000010100	DDX50	99	99.465	Gorilla_gorilla
ENSFCAG00000012678	DDX50	92	95.287	ENSHGLG00000013466	DDX50	92	95.287	Heterocephalus_glaber_female
ENSFCAG00000012678	DDX50	92	95.287	ENSHGLG00100017191	DDX50	92	95.287	Heterocephalus_glaber_male
ENSFCAG00000012678	DDX50	82	88.298	ENSHGLG00100006568	-	92	88.298	Heterocephalus_glaber_male
ENSFCAG00000012678	DDX50	99	95.535	ENSSTOG00000021852	-	100	95.264	Ictidomys_tridecemlineatus
ENSFCAG00000012678	DDX50	99	94.986	ENSJJAG00000023928	-	92	94.845	Jaculus_jaculus
ENSFCAG00000012678	DDX50	99	73.450	ENSJJAG00000019626	-	91	73.874	Jaculus_jaculus
ENSFCAG00000012678	DDX50	99	97.154	ENSLAFG00000006186	DDX50	100	97.154	Loxodonta_africana
ENSFCAG00000012678	DDX50	99	98.374	ENSMFAG00000044067	DDX50	100	98.374	Macaca_fascicularis
ENSFCAG00000012678	DDX50	97	71.784	ENSMFAG00000045339	-	89	88.715	Macaca_fascicularis
ENSFCAG00000012678	DDX50	99	98.374	ENSMMUG00000001006	DDX50	100	99.108	Macaca_mulatta
ENSFCAG00000012678	DDX50	87	67.543	ENSMMUG00000045343	-	80	68.305	Macaca_mulatta
ENSFCAG00000012678	DDX50	92	91.311	ENSMNEG00000031664	DDX50	92	91.311	Macaca_nemestrina
ENSFCAG00000012678	DDX50	97	73.003	ENSMNEG00000045530	-	89	89.969	Macaca_nemestrina
ENSFCAG00000012678	DDX50	86	84.112	ENSMLEG00000041988	-	89	87.597	Mandrillus_leucophaeus
ENSFCAG00000012678	DDX50	99	96.477	ENSMLEG00000037313	DDX50	100	96.477	Mandrillus_leucophaeus
ENSFCAG00000012678	DDX50	56	93.478	ENSMAUG00000022192	Ddx50	100	93.478	Mesocricetus_auratus
ENSFCAG00000012678	DDX50	99	90.379	ENSMICG00000017539	DDX50	100	90.379	Microcebus_murinus
ENSFCAG00000012678	DDX50	92	95.154	ENSMOCG00000001676	Ddx50	92	94.714	Microtus_ochrogaster
ENSFCAG00000012678	DDX50	92	80.381	ENSMODG00000010741	DDX50	92	80.786	Monodelphis_domestica
ENSFCAG00000012678	DDX50	92	94.109	MGP_CAROLIEiJ_G0015389	Ddx50	92	94.845	Mus_caroli
ENSFCAG00000012678	DDX50	92	94.551	ENSMUSG00000020076	Ddx50	92	95.140	Mus_musculus
ENSFCAG00000012678	DDX50	92	94.698	MGP_PahariEiJ_G0030805	Ddx50	92	95.287	Mus_pahari
ENSFCAG00000012678	DDX50	92	94.551	MGP_SPRETEiJ_G0016200	Ddx50	92	95.140	Mus_spretus
ENSFCAG00000012678	DDX50	88	98.613	ENSMPUG00000004589	DDX50	100	98.613	Mustela_putorius_furo
ENSFCAG00000012678	DDX50	99	96.341	ENSMLUG00000017590	DDX50	100	96.341	Myotis_lucifugus
ENSFCAG00000012678	DDX50	99	96.477	ENSNGAG00000004283	Ddx50	100	96.477	Nannospalax_galili
ENSFCAG00000012678	DDX50	87	69.099	ENSNLEG00000035506	-	88	78.193	Nomascus_leucogenys
ENSFCAG00000012678	DDX50	99	98.238	ENSNLEG00000011631	DDX50	100	98.238	Nomascus_leucogenys
ENSFCAG00000012678	DDX50	92	93.962	ENSOPRG00000001619	DDX50	92	94.698	Ochotona_princeps
ENSFCAG00000012678	DDX50	99	96.477	ENSODEG00000014597	-	100	96.477	Octodon_degus
ENSFCAG00000012678	DDX50	97	62.291	ENSOANG00000004776	DDX50	76	72.027	Ornithorhynchus_anatinus
ENSFCAG00000012678	DDX50	94	94.413	ENSOCUG00000002879	DDX50	95	95.876	Oryctolagus_cuniculus
ENSFCAG00000012678	DDX50	99	97.832	ENSOGAG00000001844	DDX50	100	97.832	Otolemur_garnettii
ENSFCAG00000012678	DDX50	100	97.564	ENSOARG00000005264	DDX50	100	97.564	Ovis_aries
ENSFCAG00000012678	DDX50	99	98.103	ENSPPAG00000040723	DDX50	100	98.103	Pan_paniscus
ENSFCAG00000012678	DDX50	51	71.053	ENSPPAG00000026788	-	89	79.560	Pan_paniscus
ENSFCAG00000012678	DDX50	99	100.000	ENSPPRG00000015826	DDX50	100	100.000	Panthera_pardus
ENSFCAG00000012678	DDX50	99	100.000	ENSPTIG00000008454	DDX50	100	100.000	Panthera_tigris_altaica
ENSFCAG00000012678	DDX50	51	71.053	ENSPTRG00000044913	-	99	72.105	Pan_troglodytes
ENSFCAG00000012678	DDX50	99	98.103	ENSPTRG00000002562	DDX50	100	98.103	Pan_troglodytes
ENSFCAG00000012678	DDX50	92	90.427	ENSPANG00000022143	-	92	90.427	Papio_anubis
ENSFCAG00000012678	DDX50	92	94.698	ENSPEMG00000020899	-	92	94.698	Peromyscus_maniculatus_bairdii
ENSFCAG00000012678	DDX50	91	80.176	ENSPCIG00000016036	DDX50	93	81.279	Phascolarctos_cinereus
ENSFCAG00000012678	DDX50	91	98.960	ENSPPYG00000002390	DDX50	100	98.960	Pongo_abelii
ENSFCAG00000012678	DDX50	83	83.144	ENSPCAG00000009692	DDX50	100	83.144	Procavia_capensis
ENSFCAG00000012678	DDX50	79	92.424	ENSPCOG00000012574	DDX50	91	92.424	Propithecus_coquereli
ENSFCAG00000012678	DDX50	86	96.429	ENSPVAG00000009519	DDX50	86	96.429	Pteropus_vampyrus
ENSFCAG00000012678	DDX50	92	93.962	ENSRNOG00000000396	Ddx50	98	98.396	Rattus_norvegicus
ENSFCAG00000012678	DDX50	87	96.584	ENSRBIG00000042841	-	98	98.456	Rhinopithecus_bieti
ENSFCAG00000012678	DDX50	99	67.297	ENSRBIG00000039673	-	90	66.422	Rhinopithecus_bieti
ENSFCAG00000012678	DDX50	99	67.984	ENSRBIG00000036573	-	92	68.000	Rhinopithecus_bieti
ENSFCAG00000012678	DDX50	52	71.018	ENSRROG00000031940	-	87	75.077	Rhinopithecus_roxellana
ENSFCAG00000012678	DDX50	99	65.400	ENSRROG00000022853	-	91	64.845	Rhinopithecus_roxellana
ENSFCAG00000012678	DDX50	99	98.103	ENSRROG00000032158	DDX50	100	98.665	Rhinopithecus_roxellana
ENSFCAG00000012678	DDX50	99	87.534	ENSSBOG00000014441	DDX50	100	87.534	Saimiri_boliviensis_boliviensis
ENSFCAG00000012678	DDX50	79	67.613	ENSSHAG00000005334	-	85	64.651	Sarcophilus_harrisii
ENSFCAG00000012678	DDX50	88	81.184	ENSSHAG00000005690	DDX50	91	81.241	Sarcophilus_harrisii
ENSFCAG00000012678	DDX50	99	80.623	ENSSARG00000013553	DDX50	88	88.390	Sorex_araneus
ENSFCAG00000012678	DDX50	100	97.294	ENSSSCG00000010246	DDX50	100	97.294	Sus_scrofa
ENSFCAG00000012678	DDX50	96	75.000	ENSTBEG00000001085	DDX50	92	74.669	Tupaia_belangeri
ENSFCAG00000012678	DDX50	99	91.734	ENSTTRG00000012408	DDX50	99	91.734	Tursiops_truncatus
ENSFCAG00000012678	DDX50	99	99.051	ENSUAMG00000010976	DDX50	100	99.051	Ursus_americanus
ENSFCAG00000012678	DDX50	100	99.053	ENSUMAG00000007726	DDX50	100	99.053	Ursus_maritimus
ENSFCAG00000012678	DDX50	99	97.832	ENSVPAG00000000626	DDX50	100	97.832	Vicugna_pacos
ENSFCAG00000012678	DDX50	82	93.698	ENSVVUG00000020366	DDX50	98	99.733	Vulpes_vulpes