EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000014650 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 44782 bases
Position: chrB1:98789718-98834499
Accession: 101083078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000044301	La	PF05383.17	3.9e-22	1	1
ENSFCAP00000013590	La	PF05383.17	9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000014655	-	1560	XM_023252823	ENSFCAP00000013590	520 (aa)	XP_023108591	M3WL29
ENSFCAT00000051457	-	2675	XM_023252825	ENSFCAP00000044301	335 (aa)	XP_023108593	UPI000298DF75

Gene Model

Click here to download ENSFCAG00000014650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000014650's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000014650	-	98	55.370	ENSFCAG00000000592	LARP1	53	53.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000014650	-	100	91.642	ENSG00000138709	LARP1B	100	91.642	Homo_sapiens
ENSFCAG00000014650	-	99	49.642	ENSAPOG00000020101	larp1b	51	49.642	Acanthochromis_polyacanthus
ENSFCAG00000014650	-	100	96.119	ENSAMEG00000002748	LARP1B	100	96.119	Ailuropoda_melanoleuca
ENSFCAG00000014650	-	99	49.408	ENSAOCG00000014268	larp1b	52	51.556	Amphiprion_ocellaris
ENSFCAG00000014650	-	99	51.277	ENSAPEG00000004126	larp1b	52	49.654	Amphiprion_percula
ENSFCAG00000014650	-	99	49.455	ENSATEG00000017849	larp1b	51	49.821	Anabas_testudineus
ENSFCAG00000014650	-	98	64.126	ENSAPLG00000010129	LARP1B	58	64.246	Anas_platyrhynchos
ENSFCAG00000014650	-	98	75.922	ENSACAG00000011338	LARP1B	53	75.922	Anolis_carolinensis
ENSFCAG00000014650	-	98	80.156	ENSANAG00000034618	LARP1B	96	79.456	Aotus_nancymaae
ENSFCAG00000014650	-	98	92.424	ENSBTAG00000012135	LARP1B	99	90.211	Bos_taurus
ENSFCAG00000014650	-	100	92.239	ENSCJAG00000003338	LARP1B	100	92.239	Callithrix_jacchus
ENSFCAG00000014650	-	98	96.657	ENSCAFG00000003831	LARP1B	56	95.117	Canis_familiaris
ENSFCAG00000014650	-	100	96.716	ENSCAFG00020018899	LARP1B	100	96.716	Canis_lupus_dingo
ENSFCAG00000014650	-	100	91.667	ENSCHIG00000023144	LARP1B	100	91.667	Capra_hircus
ENSFCAG00000014650	-	98	86.322	ENSTSYG00000002037	-	93	86.322	Carlito_syrichta
ENSFCAG00000014650	-	76	96.429	ENSCPOG00000034668	-	93	96.429	Cavia_porcellus
ENSFCAG00000014650	-	99	92.216	ENSCCAG00000021948	LARP1B	99	92.216	Cebus_capucinus
ENSFCAG00000014650	-	100	88.955	ENSCATG00000013541	LARP1B	100	88.955	Cercocebus_atys
ENSFCAG00000014650	-	100	87.463	ENSCLAG00000006448	-	100	87.463	Chinchilla_lanigera
ENSFCAG00000014650	-	98	91.541	ENSCSAG00000003582	LARP1B	56	89.105	Chlorocebus_sabaeus
ENSFCAG00000014650	-	98	79.297	ENSCHOG00000005354	LARP1B	58	80.312	Choloepus_hoffmanni
ENSFCAG00000014650	-	99	80.925	ENSCANG00000026958	LARP1B	100	80.925	Colobus_angolensis_palliatus
ENSFCAG00000014650	-	100	91.045	ENSCGRG00001004660	-	100	91.045	Cricetulus_griseus_chok1gshd
ENSFCAG00000014650	-	100	90.746	ENSCGRG00000001914	-	100	90.746	Cricetulus_griseus_crigri
ENSFCAG00000014650	-	97	45.273	ENSCSEG00000013519	larp1b	50	49.091	Cynoglossus_semilaevis
ENSFCAG00000014650	-	99	50.276	ENSCVAG00000005046	larp1b	50	50.441	Cyprinodon_variegatus
ENSFCAG00000014650	-	98	90.881	ENSDNOG00000018765	-	100	89.824	Dasypus_novemcinctus
ENSFCAG00000014650	-	98	43.130	ENSEBUG00000003668	larp1b	55	43.576	Eptatretus_burgeri
ENSFCAG00000014650	-	99	95.509	ENSEASG00005018106	LARP1B	99	95.509	Equus_asinus_asinus
ENSFCAG00000014650	-	63	57.471	ENSELUG00000023774	larp1b	63	47.834	Esox_lucius
ENSFCAG00000014650	-	97	68.701	ENSFALG00000008098	LARP1B	55	68.701	Ficedula_albicollis
ENSFCAG00000014650	-	98	68.482	ENSGALG00000010207	LARP1B	50	68.677	Gallus_gallus
ENSFCAG00000014650	-	89	54.098	ENSGAFG00000012012	larp1b	53	55.626	Gambusia_affinis
ENSFCAG00000014650	-	100	91.642	ENSGGOG00000015900	LARP1B	100	91.642	Gorilla_gorilla
ENSFCAG00000014650	-	98	74.468	ENSHGLG00000013922	-	97	74.545	Heterocephalus_glaber_female
ENSFCAG00000014650	-	100	85.546	ENSHGLG00000006728	-	99	85.841	Heterocephalus_glaber_female
ENSFCAG00000014650	-	100	86.269	ENSHGLG00100014041	-	96	86.269	Heterocephalus_glaber_male
ENSFCAG00000014650	-	98	74.468	ENSHGLG00100016491	-	97	74.545	Heterocephalus_glaber_male
ENSFCAG00000014650	-	96	73.520	ENSSTOG00000034510	-	87	73.520	Ictidomys_tridecemlineatus
ENSFCAG00000014650	-	99	81.873	ENSSTOG00000021917	-	94	82.175	Ictidomys_tridecemlineatus
ENSFCAG00000014650	-	100	89.583	ENSSTOG00000008596	-	100	89.583	Ictidomys_tridecemlineatus
ENSFCAG00000014650	-	91	66.667	ENSSTOG00000033183	-	100	66.667	Ictidomys_tridecemlineatus
ENSFCAG00000014650	-	99	86.826	ENSJJAG00000022360	Larp1b	99	86.826	Jaculus_jaculus
ENSFCAG00000014650	-	97	47.761	ENSKMAG00000011589	larp1b	50	50.279	Kryptolebias_marmoratus
ENSFCAG00000014650	-	98	71.456	ENSLACG00000015247	LARP1B	100	70.229	Latimeria_chalumnae
ENSFCAG00000014650	-	98	57.554	ENSLOCG00000010684	larp1b	54	60.436	Lepisosteus_oculatus
ENSFCAG00000014650	-	99	92.857	ENSLAFG00000008473	-	99	92.857	Loxodonta_africana
ENSFCAG00000014650	-	69	90.345	ENSMFAG00000003306	-	93	90.345	Macaca_fascicularis
ENSFCAG00000014650	-	100	92.537	ENSMFAG00000002218	LARP1B	100	92.537	Macaca_fascicularis
ENSFCAG00000014650	-	100	92.537	ENSMMUG00000021347	LARP1B	100	92.537	Macaca_mulatta
ENSFCAG00000014650	-	65	90.909	ENSMNEG00000027747	-	89	90.909	Macaca_nemestrina
ENSFCAG00000014650	-	83	85.833	ENSMNEG00000030406	LARP1B	52	85.833	Macaca_nemestrina
ENSFCAG00000014650	-	98	82.422	ENSMLEG00000009306	LARP1B	55	82.422	Mandrillus_leucophaeus
ENSFCAG00000014650	-	99	50.376	ENSMAMG00000000081	larp1b	52	51.434	Mastacembelus_armatus
ENSFCAG00000014650	-	83	54.525	ENSMZEG00005002545	larp1b	90	54.746	Maylandia_zebra
ENSFCAG00000014650	-	98	56.000	ENSMGAG00000004809	LARP1B	60	56.752	Meleagris_gallopavo
ENSFCAG00000014650	-	100	90.149	ENSMAUG00000007879	-	100	90.149	Mesocricetus_auratus
ENSFCAG00000014650	-	100	94.925	ENSMICG00000036111	LARP1B	100	94.925	Microcebus_murinus
ENSFCAG00000014650	-	98	78.852	ENSMICG00000037883	-	90	78.852	Microcebus_murinus
ENSFCAG00000014650	-	97	69.632	ENSMICG00000028052	-	99	68.627	Microcebus_murinus
ENSFCAG00000014650	-	79	93.916	ENSMOCG00000001490	Larp1b	95	93.916	Microtus_ochrogaster
ENSFCAG00000014650	-	99	50.995	ENSMALG00000003638	larp1b	52	51.449	Monopterus_albus
ENSFCAG00000014650	-	100	89.254	MGP_CAROLIEiJ_G0024962	Larp1b	100	89.254	Mus_caroli
ENSFCAG00000014650	-	100	90.448	ENSMUSG00000025762	Larp1b	100	90.448	Mus_musculus
ENSFCAG00000014650	-	100	89.851	MGP_PahariEiJ_G0026403	Larp1b	100	89.851	Mus_pahari
ENSFCAG00000014650	-	100	90.448	MGP_SPRETEiJ_G0025897	Larp1b	100	90.448	Mus_spretus
ENSFCAG00000014650	-	98	82.255	ENSMLUG00000010229	LARP1B	59	82.255	Myotis_lucifugus
ENSFCAG00000014650	-	100	91.642	ENSNLEG00000013819	LARP1B	100	91.642	Nomascus_leucogenys
ENSFCAG00000014650	-	98	75.380	ENSOPRG00000005478	LARP1B	56	69.261	Ochotona_princeps
ENSFCAG00000014650	-	100	88.060	ENSODEG00000001292	-	100	88.060	Octodon_degus
ENSFCAG00000014650	-	97	51.603	ENSONIG00000012386	larp1b	55	51.107	Oreochromis_niloticus
ENSFCAG00000014650	-	98	93.617	ENSOCUG00000013330	LARP1B	56	91.016	Oryctolagus_cuniculus
ENSFCAG00000014650	-	99	49.727	ENSOMEG00000004210	larp1b	50	50.181	Oryzias_melastigma
ENSFCAG00000014650	-	98	90.606	ENSOGAG00000005771	LARP1B	59	89.474	Otolemur_garnettii
ENSFCAG00000014650	-	98	92.121	ENSOARG00000015300	LARP1B	56	89.864	Ovis_aries
ENSFCAG00000014650	-	100	91.343	ENSPPAG00000030439	LARP1B	100	91.343	Pan_paniscus
ENSFCAG00000014650	-	100	100.000	ENSPPRG00000002743	-	100	100.000	Panthera_pardus
ENSFCAG00000014650	-	100	99.701	ENSPTIG00000011225	LARP1B	100	99.701	Panthera_tigris_altaica
ENSFCAG00000014650	-	100	91.045	ENSPTRG00000016437	LARP1B	100	91.045	Pan_troglodytes
ENSFCAG00000014650	-	100	92.239	ENSPANG00000012488	LARP1B	100	92.239	Papio_anubis
ENSFCAG00000014650	-	98	76.789	ENSPSIG00000012885	LARP1B	55	76.983	Pelodiscus_sinensis
ENSFCAG00000014650	-	99	44.086	ENSPMAG00000002700	larp1b	58	47.227	Petromyzon_marinus
ENSFCAG00000014650	-	99	84.776	ENSPCIG00000026516	LARP1B	87	85.455	Phascolarctos_cinereus
ENSFCAG00000014650	-	99	50.138	ENSPFOG00000019519	larp1b	50	51.779	Poecilia_formosa
ENSFCAG00000014650	-	97	53.084	ENSPFOG00000022837	-	77	53.271	Poecilia_formosa
ENSFCAG00000014650	-	80	56.690	ENSPREG00000005955	-	89	56.338	Poecilia_reticulata
ENSFCAG00000014650	-	98	87.538	ENSPCAG00000007546	LARP1B	56	85.547	Procavia_capensis
ENSFCAG00000014650	-	100	94.030	ENSPCOG00000021874	LARP1B	100	94.030	Propithecus_coquereli
ENSFCAG00000014650	-	98	87.500	ENSPVAG00000005373	LARP1B	57	87.500	Pteropus_vampyrus
ENSFCAG00000014650	-	100	91.642	ENSRNOG00000038366	Larp1b	100	91.642	Rattus_norvegicus
ENSFCAG00000014650	-	100	90.448	ENSRBIG00000039982	-	100	90.448	Rhinopithecus_bieti
ENSFCAG00000014650	-	100	82.985	ENSRBIG00000038568	-	92	82.985	Rhinopithecus_bieti
ENSFCAG00000014650	-	100	74.328	ENSRROG00000038525	-	96	74.328	Rhinopithecus_roxellana
ENSFCAG00000014650	-	100	92.537	ENSRROG00000030771	LARP1B	100	92.537	Rhinopithecus_roxellana
ENSFCAG00000014650	-	98	88.182	ENSSHAG00000014474	LARP1B	77	87.549	Sarcophilus_harrisii
ENSFCAG00000014650	-	98	50.279	ENSSMAG00000006347	larp1b	54	50.730	Scophthalmus_maximus
ENSFCAG00000014650	-	99	49.548	ENSSDUG00000004182	larp1b	50	49.729	Seriola_dumerili
ENSFCAG00000014650	-	98	75.922	ENSSPUG00000011837	LARP1B	73	76.117	Sphenodon_punctatus
ENSFCAG00000014650	-	99	50.268	ENSSPAG00000017772	larp1b	51	50.626	Stegastes_partitus
ENSFCAG00000014650	-	98	93.009	ENSSSCG00000034280	LARP1B	99	89.038	Sus_scrofa
ENSFCAG00000014650	-	73	56.790	ENSSSCG00000040491	-	99	73.529	Sus_scrofa
ENSFCAG00000014650	-	73	72.539	ENSTGUG00000002098	-	54	63.360	Taeniopygia_guttata
ENSFCAG00000014650	-	97	47.772	ENSTNIG00000012398	larp1b	57	49.104	Tetraodon_nigroviridis
ENSFCAG00000014650	-	98	81.676	ENSTTRG00000012984	LARP1B	56	81.676	Tursiops_truncatus
ENSFCAG00000014650	-	100	85.373	ENSUAMG00000016938	-	91	98.225	Ursus_americanus
ENSFCAG00000014650	-	98	95.745	ENSUMAG00000007373	LARP1B	56	94.531	Ursus_maritimus
ENSFCAG00000014650	-	98	82.031	ENSVPAG00000007223	LARP1B	56	82.031	Vicugna_pacos
ENSFCAG00000014650	-	98	96.657	ENSVVUG00000011307	LARP1B	100	95.294	Vulpes_vulpes
ENSFCAG00000014650	-	98	55.577	ENSXETG00000022512	larp1b	51	55.577	Xenopus_tropicalis
ENSFCAG00000014650	-	99	50.987	ENSXMAG00000008150	larp1b	50	50.794	Xiphophorus_maculatus