EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000014924 (Gene tree)
Gene ID: 101096868
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 82724 bases
Position: chrF1:18092310-18175033
Accession: 101096868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000013844	zf-CCCH	PF00642.24	0.00024	1	1
ENSFCAP00000047653	zf-CCCH	PF00642.24	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000051274	RC3H1-201	5569	-	ENSFCAP00000047653	1133 (aa)	-	UPI0005ABF8F6
ENSFCAT00000014928	RC3H1-202	3706	XM_023247903	ENSFCAP00000013844	1133 (aa)	XP_023103671	M3WLL9

Gene Model

Click here to download ENSFCAG00000014924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000014924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000014924	RC3H1	92	54.273	ENSFCAG00000007375	RC3H2	87	53.832

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000014924	RC3H1	100	97.352	ENSG00000135870	RC3H1	100	97.352	Homo_sapiens
ENSFCAG00000014924	RC3H1	100	97.705	ENSAMEG00000015657	RC3H1	100	97.705	Ailuropoda_melanoleuca
ENSFCAG00000014924	RC3H1	100	88.666	ENSAPLG00000005341	RC3H1	100	88.133	Anas_platyrhynchos
ENSFCAG00000014924	RC3H1	100	85.166	ENSACAG00000015271	RC3H1	100	84.790	Anolis_carolinensis
ENSFCAG00000014924	RC3H1	100	97.882	ENSANAG00000036716	RC3H1	100	97.882	Aotus_nancymaae
ENSFCAG00000014924	RC3H1	100	96.293	ENSBTAG00000052708	RC3H1	100	96.293	Bos_taurus
ENSFCAG00000014924	RC3H1	100	97.529	ENSCJAG00000009106	RC3H1	100	97.529	Callithrix_jacchus
ENSFCAG00000014924	RC3H1	100	97.793	ENSCAFG00000014434	RC3H1	100	97.793	Canis_familiaris
ENSFCAG00000014924	RC3H1	100	97.707	ENSCAFG00020017112	RC3H1	100	97.707	Canis_lupus_dingo
ENSFCAG00000014924	RC3H1	100	96.381	ENSCHIG00000002873	RC3H1	100	96.381	Capra_hircus
ENSFCAG00000014924	RC3H1	99	95.763	ENSTSYG00000003913	RC3H1	99	95.763	Carlito_syrichta
ENSFCAG00000014924	RC3H1	100	91.799	ENSCPOG00000004349	RC3H1	100	91.711	Cavia_porcellus
ENSFCAG00000014924	RC3H1	100	95.587	ENSCCAG00000025652	RC3H1	100	95.587	Cebus_capucinus
ENSFCAG00000014924	RC3H1	100	97.529	ENSCATG00000033497	RC3H1	100	97.529	Cercocebus_atys
ENSFCAG00000014924	RC3H1	100	95.150	ENSCLAG00000011267	RC3H1	100	95.150	Chinchilla_lanigera
ENSFCAG00000014924	RC3H1	96	97.514	ENSCSAG00000011823	RC3H1	85	97.514	Chlorocebus_sabaeus
ENSFCAG00000014924	RC3H1	100	89.825	ENSCPBG00000014670	RC3H1	100	89.386	Chrysemys_picta_bellii
ENSFCAG00000014924	RC3H1	100	97.531	ENSCANG00000032120	RC3H1	100	97.531	Colobus_angolensis_palliatus
ENSFCAG00000014924	RC3H1	100	94.616	ENSCGRG00001020812	Rc3h1	100	94.175	Cricetulus_griseus_chok1gshd
ENSFCAG00000014924	RC3H1	100	94.616	ENSCGRG00000011952	Rc3h1	100	94.175	Cricetulus_griseus_crigri
ENSFCAG00000014924	RC3H1	55	95.016	ENSDNOG00000011494	RC3H1	99	95.016	Dasypus_novemcinctus
ENSFCAG00000014924	RC3H1	100	95.499	ENSDORG00000004855	Rc3h1	100	95.499	Dipodomys_ordii
ENSFCAG00000014924	RC3H1	81	97.126	ENSETEG00000012064	RC3H1	87	97.126	Echinops_telfairi
ENSFCAG00000014924	RC3H1	100	96.028	ENSEASG00005017000	RC3H1	100	96.028	Equus_asinus_asinus
ENSFCAG00000014924	RC3H1	100	95.852	ENSECAG00000021208	RC3H1	100	95.852	Equus_caballus
ENSFCAG00000014924	RC3H1	83	96.639	ENSEEUG00000014861	RC3H1	93	83.117	Erinaceus_europaeus
ENSFCAG00000014924	RC3H1	100	87.424	ENSFALG00000002947	RC3H1	100	86.276	Ficedula_albicollis
ENSFCAG00000014924	RC3H1	100	95.503	ENSFDAG00000013303	RC3H1	100	95.503	Fukomys_damarensis
ENSFCAG00000014924	RC3H1	100	87.818	ENSGALG00000004587	RC3H1	100	87.281	Gallus_gallus
ENSFCAG00000014924	RC3H1	100	87.982	ENSGAGG00000018194	RC3H1	100	87.895	Gopherus_agassizii
ENSFCAG00000014924	RC3H1	100	90.237	ENSGGOG00000005735	RC3H1	100	90.237	Gorilla_gorilla
ENSFCAG00000014924	RC3H1	88	89.175	ENSHGLG00000004183	-	99	89.130	Heterocephalus_glaber_female
ENSFCAG00000014924	RC3H1	100	94.621	ENSHGLG00100008577	RC3H1	100	94.621	Heterocephalus_glaber_male
ENSFCAG00000014924	RC3H1	100	96.737	ENSSTOG00000016033	RC3H1	100	96.737	Ictidomys_tridecemlineatus
ENSFCAG00000014924	RC3H1	100	95.410	ENSJJAG00000018915	Rc3h1	100	95.146	Jaculus_jaculus
ENSFCAG00000014924	RC3H1	100	74.848	ENSLACG00000016186	RC3H1	100	77.545	Latimeria_chalumnae
ENSFCAG00000014924	RC3H1	97	97.268	ENSLAFG00000004367	RC3H1	100	97.268	Loxodonta_africana
ENSFCAG00000014924	RC3H1	100	97.440	ENSMFAG00000033725	RC3H1	100	97.440	Macaca_fascicularis
ENSFCAG00000014924	RC3H1	100	97.529	ENSMMUG00000000630	RC3H1	100	97.529	Macaca_mulatta
ENSFCAG00000014924	RC3H1	100	97.529	ENSMNEG00000035968	RC3H1	100	97.529	Macaca_nemestrina
ENSFCAG00000014924	RC3H1	100	97.440	ENSMLEG00000037455	RC3H1	100	97.440	Mandrillus_leucophaeus
ENSFCAG00000014924	RC3H1	97	94.657	ENSMAUG00000020864	Rc3h1	100	94.153	Mesocricetus_auratus
ENSFCAG00000014924	RC3H1	100	97.087	ENSMICG00000003000	RC3H1	100	97.087	Microcebus_murinus
ENSFCAG00000014924	RC3H1	93	93.371	ENSMOCG00000016587	Rc3h1	98	92.992	Microtus_ochrogaster
ENSFCAG00000014924	RC3H1	100	92.328	ENSMODG00000004289	RC3H1	100	92.416	Monodelphis_domestica
ENSFCAG00000014924	RC3H1	100	93.910	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.469	Mus_caroli
ENSFCAG00000014924	RC3H1	100	93.733	ENSMUSG00000040423	Rc3h1	100	93.292	Mus_musculus
ENSFCAG00000014924	RC3H1	100	93.557	MGP_PahariEiJ_G0027992	Rc3h1	100	93.116	Mus_pahari
ENSFCAG00000014924	RC3H1	100	93.557	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.116	Mus_spretus
ENSFCAG00000014924	RC3H1	100	97.795	ENSMPUG00000004747	RC3H1	100	97.795	Mustela_putorius_furo
ENSFCAG00000014924	RC3H1	100	95.675	ENSMLUG00000011127	RC3H1	100	95.675	Myotis_lucifugus
ENSFCAG00000014924	RC3H1	100	96.028	ENSNGAG00000011135	Rc3h1	100	96.028	Nannospalax_galili
ENSFCAG00000014924	RC3H1	100	97.264	ENSNLEG00000015327	RC3H1	100	97.264	Nomascus_leucogenys
ENSFCAG00000014924	RC3H1	99	83.112	ENSOPRG00000013068	RC3H1	99	83.201	Ochotona_princeps
ENSFCAG00000014924	RC3H1	100	94.885	ENSODEG00000014185	RC3H1	100	94.885	Octodon_degus
ENSFCAG00000014924	RC3H1	100	91.354	ENSOANG00000000924	RC3H1	100	91.266	Ornithorhynchus_anatinus
ENSFCAG00000014924	RC3H1	99	96.240	ENSOCUG00000004930	RC3H1	98	96.240	Oryctolagus_cuniculus
ENSFCAG00000014924	RC3H1	100	89.956	ENSOGAG00000004044	RC3H1	100	89.956	Otolemur_garnettii
ENSFCAG00000014924	RC3H1	100	96.667	ENSOARG00000013011	RC3H1	100	96.667	Ovis_aries
ENSFCAG00000014924	RC3H1	100	97.354	ENSPPAG00000039253	RC3H1	100	97.354	Pan_paniscus
ENSFCAG00000014924	RC3H1	100	98.764	ENSPPRG00000009007	RC3H1	100	98.764	Panthera_pardus
ENSFCAG00000014924	RC3H1	100	99.121	ENSPTIG00000015326	RC3H1	100	99.121	Panthera_tigris_altaica
ENSFCAG00000014924	RC3H1	100	97.354	ENSPTRG00000001702	RC3H1	100	97.354	Pan_troglodytes
ENSFCAG00000014924	RC3H1	100	97.440	ENSPANG00000008886	RC3H1	100	97.440	Papio_anubis
ENSFCAG00000014924	RC3H1	100	88.869	ENSPSIG00000016181	RC3H1	100	89.045	Pelodiscus_sinensis
ENSFCAG00000014924	RC3H1	100	94.175	ENSPEMG00000011966	Rc3h1	100	93.645	Peromyscus_maniculatus_bairdii
ENSFCAG00000014924	RC3H1	70	94.430	ENSPCIG00000002058	RC3H1	95	98.655	Phascolarctos_cinereus
ENSFCAG00000014924	RC3H1	100	94.086	ENSPPYG00000000490	RC3H1	98	96.459	Pongo_abelii
ENSFCAG00000014924	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSFCAG00000014924	RC3H1	83	96.581	ENSPCOG00000021795	RC3H1	96	96.581	Propithecus_coquereli
ENSFCAG00000014924	RC3H1	100	88.085	ENSPVAG00000007593	RC3H1	100	88.085	Pteropus_vampyrus
ENSFCAG00000014924	RC3H1	97	61.302	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSFCAG00000014924	RC3H1	100	97.443	ENSRBIG00000037743	RC3H1	100	97.443	Rhinopithecus_bieti
ENSFCAG00000014924	RC3H1	100	97.352	ENSRROG00000036546	RC3H1	100	97.352	Rhinopithecus_roxellana
ENSFCAG00000014924	RC3H1	93	89.299	ENSSBOG00000010664	RC3H1	100	91.296	Saimiri_boliviensis_boliviensis
ENSFCAG00000014924	RC3H1	100	91.278	ENSSHAG00000007589	RC3H1	100	91.366	Sarcophilus_harrisii
ENSFCAG00000014924	RC3H1	87	86.486	ENSSARG00000004660	RC3H1	86	86.486	Sorex_araneus
ENSFCAG00000014924	RC3H1	100	84.501	ENSSPUG00000018472	RC3H1	100	83.874	Sphenodon_punctatus
ENSFCAG00000014924	RC3H1	100	97.440	ENSSSCG00000015498	RC3H1	100	97.440	Sus_scrofa
ENSFCAG00000014924	RC3H1	100	87.982	ENSTGUG00000004090	RC3H1	100	87.270	Taeniopygia_guttata
ENSFCAG00000014924	RC3H1	89	96.866	ENSTBEG00000005015	RC3H1	89	96.866	Tupaia_belangeri
ENSFCAG00000014924	RC3H1	100	97.004	ENSTTRG00000008572	RC3H1	100	97.004	Tursiops_truncatus
ENSFCAG00000014924	RC3H1	100	97.087	ENSUAMG00000019525	RC3H1	100	97.087	Ursus_americanus
ENSFCAG00000014924	RC3H1	100	97.619	ENSUMAG00000020087	RC3H1	100	97.619	Ursus_maritimus
ENSFCAG00000014924	RC3H1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSFCAG00000014924	RC3H1	100	97.449	ENSVVUG00000014201	RC3H1	100	97.449	Vulpes_vulpes
ENSFCAG00000014924	RC3H1	100	78.416	ENSXETG00000020030	rc3h1	100	77.787	Xenopus_tropicalis