EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000015069 (Gene tree)
Gene ID: 101095706
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 18198 bases
Position: chrE3:6656661-6674858
Accession: 101095706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000013978	PPR	PF01535.20	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000015073	-	3263	XM_006941945	ENSFCAP00000013978	705 (aa)	XP_006942007	M3WLW0

Gene Model

Click here to download ENSFCAG00000015069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000015069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000015069	-	100	76.554	ENSG00000106246	PTCD1	100	76.695	Homo_sapiens
ENSFCAG00000015069	-	100	76.554	ENSG00000248919	ATP5MF-PTCD1	93	76.695	Homo_sapiens
ENSFCAG00000015069	-	86	45.440	ENSAPOG00000010679	ptcd1	90	45.603	Acanthochromis_polyacanthus
ENSFCAG00000015069	-	100	89.220	ENSAMEG00000006224	-	93	89.220	Ailuropoda_melanoleuca
ENSFCAG00000015069	-	85	49.423	ENSACIG00000017861	ptcd1	86	48.929	Amphilophus_citrinellus
ENSFCAG00000015069	-	88	48.177	ENSAOCG00000020741	-	86	47.854	Amphiprion_ocellaris
ENSFCAG00000015069	-	84	47.430	ENSAOCG00000022617	ptcd1	87	47.088	Amphiprion_ocellaris
ENSFCAG00000015069	-	88	47.695	ENSAPEG00000022632	ptcd1	86	47.695	Amphiprion_percula
ENSFCAG00000015069	-	86	50.246	ENSATEG00000007016	ptcd1	83	50.409	Anabas_testudineus
ENSFCAG00000015069	-	84	61.667	ENSAPLG00000006862	-	94	61.194	Anas_platyrhynchos
ENSFCAG00000015069	-	100	55.494	ENSACAG00000012871	-	93	55.292	Anolis_carolinensis
ENSFCAG00000015069	-	97	76.667	ENSANAG00000035790	-	99	76.812	Aotus_nancymaae
ENSFCAG00000015069	-	83	50.085	ENSACLG00000002824	ptcd1	80	50.085	Astatotilapia_calliptera
ENSFCAG00000015069	-	86	49.685	ENSAMXG00000037292	ptcd1	91	48.694	Astyanax_mexicanus
ENSFCAG00000015069	-	100	81.831	ENSBTAG00000020440	-	87	81.831	Bos_taurus
ENSFCAG00000015069	-	100	76.695	ENSCJAG00000015815	-	100	76.836	Callithrix_jacchus
ENSFCAG00000015069	-	100	88.652	ENSCAFG00000015055	-	93	88.652	Canis_familiaris
ENSFCAG00000015069	-	100	88.652	ENSCAFG00020014480	-	93	88.652	Canis_lupus_dingo
ENSFCAG00000015069	-	100	81.408	ENSCHIG00000027000	-	99	81.408	Capra_hircus
ENSFCAG00000015069	-	100	80.595	ENSTSYG00000029495	-	100	80.595	Carlito_syrichta
ENSFCAG00000015069	-	93	79.027	ENSCAPG00000014660	-	100	79.027	Cavia_aperea
ENSFCAG00000015069	-	100	78.329	ENSCPOG00000001780	-	100	78.329	Cavia_porcellus
ENSFCAG00000015069	-	100	74.894	ENSCCAG00000034025	-	100	76.023	Cebus_capucinus
ENSFCAG00000015069	-	100	75.458	ENSCATG00000040859	-	100	75.882	Cercocebus_atys
ENSFCAG00000015069	-	98	79.798	ENSCLAG00000006354	-	100	78.925	Chinchilla_lanigera
ENSFCAG00000015069	-	91	75.193	ENSCSAG00000017794	-	95	75.655	Chlorocebus_sabaeus
ENSFCAG00000015069	-	97	57.692	ENSCPBG00000020866	-	97	57.280	Chrysemys_picta_bellii
ENSFCAG00000015069	-	83	31.386	ENSCING00000007717	-	97	31.553	Ciona_intestinalis
ENSFCAG00000015069	-	100	75.389	ENSCANG00000023441	-	100	75.813	Colobus_angolensis_palliatus
ENSFCAG00000015069	-	100	75.847	ENSCGRG00001023686	Ptcd1	100	75.847	Cricetulus_griseus_chok1gshd
ENSFCAG00000015069	-	99	75.740	ENSCGRG00000015031	Ptcd1	100	75.740	Cricetulus_griseus_crigri
ENSFCAG00000015069	-	86	46.481	ENSCSEG00000002378	ptcd1	83	46.318	Cynoglossus_semilaevis
ENSFCAG00000015069	-	85	47.525	ENSCVAG00000003621	ptcd1	88	46.972	Cyprinodon_variegatus
ENSFCAG00000015069	-	88	46.252	ENSCVAG00000015826	ptcd1	85	46.411	Cyprinodon_variegatus
ENSFCAG00000015069	-	89	49.685	ENSDARG00000076176	ptcd1	90	49.685	Danio_rerio
ENSFCAG00000015069	-	100	77.778	ENSDNOG00000009957	-	100	78.652	Dasypus_novemcinctus
ENSFCAG00000015069	-	98	76.445	ENSDORG00000000740	Ptcd1	99	76.445	Dipodomys_ordii
ENSFCAG00000015069	-	87	41.203	ENSEBUG00000014515	ptcd1	97	42.334	Eptatretus_burgeri
ENSFCAG00000015069	-	100	85.352	ENSEASG00005002480	-	100	85.352	Equus_asinus_asinus
ENSFCAG00000015069	-	100	86.056	ENSECAG00000016617	-	100	86.056	Equus_caballus
ENSFCAG00000015069	-	86	46.855	ENSELUG00000016517	ptcd1	84	46.855	Esox_lucius
ENSFCAG00000015069	-	87	60.653	ENSFALG00000013803	-	93	58.702	Ficedula_albicollis
ENSFCAG00000015069	-	100	76.912	ENSFDAG00000006393	-	100	76.912	Fukomys_damarensis
ENSFCAG00000015069	-	78	46.655	ENSFHEG00000012491	ptcd1	94	46.549	Fundulus_heteroclitus
ENSFCAG00000015069	-	82	47.931	ENSGMOG00000007639	ptcd1	91	47.279	Gadus_morhua
ENSFCAG00000015069	-	86	59.429	ENSGALG00000004711	-	87	58.805	Gallus_gallus
ENSFCAG00000015069	-	84	48.997	ENSGAFG00000013175	ptcd1	83	48.997	Gambusia_affinis
ENSFCAG00000015069	-	87	48.341	ENSGACG00000016607	ptcd1	91	48.796	Gasterosteus_aculeatus
ENSFCAG00000015069	-	92	56.509	ENSGAGG00000021832	-	99	56.213	Gopherus_agassizii
ENSFCAG00000015069	-	99	75.955	ENSGGOG00000015123	-	99	76.096	Gorilla_gorilla
ENSFCAG00000015069	-	83	49.915	ENSHBUG00000018275	ptcd1	80	49.915	Haplochromis_burtoni
ENSFCAG00000015069	-	100	78.169	ENSHGLG00000017621	-	100	78.169	Heterocephalus_glaber_female
ENSFCAG00000015069	-	100	78.169	ENSHGLG00100007218	-	100	78.169	Heterocephalus_glaber_male
ENSFCAG00000015069	-	83	47.530	ENSHCOG00000010784	ptcd1	82	47.538	Hippocampus_comes
ENSFCAG00000015069	-	100	78.371	ENSSTOG00000001682	-	100	78.420	Ictidomys_tridecemlineatus
ENSFCAG00000015069	-	100	74.929	ENSJJAG00000000319	Ptcd1	100	74.929	Jaculus_jaculus
ENSFCAG00000015069	-	92	46.423	ENSKMAG00000008708	ptcd1	89	46.271	Kryptolebias_marmoratus
ENSFCAG00000015069	-	83	48.229	ENSLBEG00000008061	ptcd1	80	48.229	Labrus_bergylta
ENSFCAG00000015069	-	90	55.146	ENSLACG00000011172	ptcd1	90	55.453	Latimeria_chalumnae
ENSFCAG00000015069	-	88	52.951	ENSLOCG00000004833	ptcd1	97	52.951	Lepisosteus_oculatus
ENSFCAG00000015069	-	100	74.930	ENSLAFG00000002588	-	100	74.930	Loxodonta_africana
ENSFCAG00000015069	-	100	75.317	ENSMFAG00000041324	-	100	75.740	Macaca_fascicularis
ENSFCAG00000015069	-	100	75.176	ENSMMUG00000030408	-	100	75.599	Macaca_mulatta
ENSFCAG00000015069	-	100	75.458	ENSMNEG00000043786	-	100	75.882	Macaca_nemestrina
ENSFCAG00000015069	-	68	60.331	ENSMLEG00000031179	-	100	58.485	Mandrillus_leucophaeus
ENSFCAG00000015069	-	90	47.786	ENSMAMG00000007623	ptcd1	89	47.344	Mastacembelus_armatus
ENSFCAG00000015069	-	83	48.653	ENSMZEG00005012722	ptcd1	80	48.653	Maylandia_zebra
ENSFCAG00000015069	-	99	55.949	ENSMGAG00000004211	-	92	56.091	Meleagris_gallopavo
ENSFCAG00000015069	-	100	79.155	ENSMICG00000017428	-	100	79.155	Microcebus_murinus
ENSFCAG00000015069	-	88	46.845	ENSMMOG00000020243	ptcd1	92	47.883	Mola_mola
ENSFCAG00000015069	-	99	61.005	ENSMODG00000001350	-	99	61.141	Monodelphis_domestica
ENSFCAG00000015069	-	88	49.285	ENSMALG00000018442	ptcd1	85	49.285	Monopterus_albus
ENSFCAG00000015069	-	99	76.934	MGP_CAROLIEiJ_G0028011	Ptcd1	99	77.077	Mus_caroli
ENSFCAG00000015069	-	99	76.934	ENSMUSG00000029624	Ptcd1	99	77.077	Mus_musculus
ENSFCAG00000015069	-	99	77.475	MGP_PahariEiJ_G0024580	Ptcd1	99	77.618	Mus_pahari
ENSFCAG00000015069	-	99	77.221	MGP_SPRETEiJ_G0029012	Ptcd1	99	77.364	Mus_spretus
ENSFCAG00000015069	-	100	88.369	ENSMPUG00000016518	-	100	89.220	Mustela_putorius_furo
ENSFCAG00000015069	-	100	84.648	ENSMLUG00000010994	-	94	85.070	Myotis_lucifugus
ENSFCAG00000015069	-	86	49.674	ENSNBRG00000010079	ptcd1	86	49.349	Neolamprologus_brichardi
ENSFCAG00000015069	-	100	80.399	ENSNLEG00000011060	-	100	80.399	Nomascus_leucogenys
ENSFCAG00000015069	-	98	61.048	ENSMEUG00000006930	-	99	61.048	Notamacropus_eugenii
ENSFCAG00000015069	-	90	77.442	ENSOPRG00000013647	-	90	77.442	Ochotona_princeps
ENSFCAG00000015069	-	86	47.258	ENSONIG00000003168	ptcd1	99	46.935	Oreochromis_niloticus
ENSFCAG00000015069	-	81	57.292	ENSOANG00000007728	-	75	56.771	Ornithorhynchus_anatinus
ENSFCAG00000015069	-	99	76.869	ENSOCUG00000010584	-	98	76.869	Oryctolagus_cuniculus
ENSFCAG00000015069	-	89	47.731	ENSORLG00000009275	ptcd1	89	47.731	Oryzias_latipes
ENSFCAG00000015069	-	89	47.785	ENSORLG00020000988	ptcd1	89	47.785	Oryzias_latipes_hni
ENSFCAG00000015069	-	89	47.152	ENSORLG00015010557	ptcd1	89	47.152	Oryzias_latipes_hsok
ENSFCAG00000015069	-	85	49.172	ENSOMEG00000020627	ptcd1	87	49.172	Oryzias_melastigma
ENSFCAG00000015069	-	99	76.136	ENSOGAG00000010877	-	100	76.136	Otolemur_garnettii
ENSFCAG00000015069	-	100	75.809	ENSOARG00000018676	-	100	75.809	Ovis_aries
ENSFCAG00000015069	-	100	76.271	ENSPPAG00000036024	-	100	76.271	Pan_paniscus
ENSFCAG00000015069	-	100	97.589	ENSPPRG00000003478	-	100	97.589	Panthera_pardus
ENSFCAG00000015069	-	100	76.271	ENSPTRG00000019452	-	100	76.271	Pan_troglodytes
ENSFCAG00000015069	-	100	75.458	ENSPANG00000016730	-	100	75.882	Papio_anubis
ENSFCAG00000015069	-	90	50.152	ENSPKIG00000014215	ptcd1	94	49.329	Paramormyrops_kingsleyae
ENSFCAG00000015069	-	85	60.762	ENSPSIG00000011184	-	100	61.258	Pelodiscus_sinensis
ENSFCAG00000015069	-	73	41.923	ENSPMAG00000009667	ptcd1	100	41.346	Petromyzon_marinus
ENSFCAG00000015069	-	99	60.027	ENSPCIG00000024778	-	99	60.163	Phascolarctos_cinereus
ENSFCAG00000015069	-	89	47.402	ENSPFOG00000004458	ptcd1	86	47.244	Poecilia_formosa
ENSFCAG00000015069	-	84	49.246	ENSPLAG00000011051	ptcd1	82	49.246	Poecilia_latipinna
ENSFCAG00000015069	-	89	47.087	ENSPMEG00000020547	ptcd1	86	46.929	Poecilia_mexicana
ENSFCAG00000015069	-	83	48.722	ENSPREG00000000059	ptcd1	88	46.805	Poecilia_reticulata
ENSFCAG00000015069	-	93	77.744	ENSPPYG00000017377	-	99	77.744	Pongo_abelii
ENSFCAG00000015069	-	81	77.465	ENSPCAG00000001852	-	89	77.465	Procavia_capensis
ENSFCAG00000015069	-	100	79.320	ENSPCOG00000018596	-	100	79.320	Propithecus_coquereli
ENSFCAG00000015069	-	67	87.000	ENSPVAG00000007529	-	71	87.000	Pteropus_vampyrus
ENSFCAG00000015069	-	83	50.085	ENSPNYG00000019993	ptcd1	80	50.085	Pundamilia_nyererei
ENSFCAG00000015069	-	88	51.030	ENSPNAG00000014931	ptcd1	92	50.998	Pygocentrus_nattereri
ENSFCAG00000015069	-	99	76.901	ENSRNOG00000000987	Ptcd1	99	76.868	Rattus_norvegicus
ENSFCAG00000015069	-	100	75.530	ENSRBIG00000043393	-	100	75.955	Rhinopithecus_bieti
ENSFCAG00000015069	-	100	75.389	ENSRROG00000036420	-	100	75.813	Rhinopithecus_roxellana
ENSFCAG00000015069	-	100	76.836	ENSSBOG00000024114	-	100	76.977	Saimiri_boliviensis_boliviensis
ENSFCAG00000015069	-	99	56.931	ENSSHAG00000011376	-	99	61.854	Sarcophilus_harrisii
ENSFCAG00000015069	-	90	53.374	ENSSFOG00015007909	ptcd1	87	53.130	Scleropages_formosus
ENSFCAG00000015069	-	87	45.498	ENSSMAG00000000218	ptcd1	95	45.498	Scophthalmus_maximus
ENSFCAG00000015069	-	97	45.376	ENSSDUG00000015671	ptcd1	95	45.376	Seriola_dumerili
ENSFCAG00000015069	-	96	45.918	ENSSLDG00000014261	ptcd1	94	45.918	Seriola_lalandi_dorsalis
ENSFCAG00000015069	-	87	58.814	ENSSPUG00000003540	-	86	58.970	Sphenodon_punctatus
ENSFCAG00000015069	-	88	48.889	ENSSPAG00000011049	ptcd1	84	48.571	Stegastes_partitus
ENSFCAG00000015069	-	92	84.332	ENSSSCG00000007622	-	99	84.195	Sus_scrofa
ENSFCAG00000015069	-	87	61.228	ENSTGUG00000007563	-	99	61.912	Taeniopygia_guttata
ENSFCAG00000015069	-	83	48.480	ENSTRUG00000013471	ptcd1	79	48.142	Takifugu_rubripes
ENSFCAG00000015069	-	91	46.554	ENSTNIG00000008271	ptcd1	92	46.401	Tetraodon_nigroviridis
ENSFCAG00000015069	-	100	78.420	ENSTBEG00000011021	-	100	78.279	Tupaia_belangeri
ENSFCAG00000015069	-	100	81.161	ENSTTRG00000003006	-	100	81.161	Tursiops_truncatus
ENSFCAG00000015069	-	100	89.504	ENSUAMG00000008049	-	100	89.504	Ursus_americanus
ENSFCAG00000015069	-	99	89.174	ENSVVUG00000008836	-	100	89.174	Vulpes_vulpes
ENSFCAG00000015069	-	89	54.041	ENSXETG00000009891	ptcd1	92	53.571	Xenopus_tropicalis
ENSFCAG00000015069	-	84	49.076	ENSXMAG00000015540	ptcd1	82	48.904	Xiphophorus_maculatus