EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFCAG00000015254 (Gene tree)
Gene ID
101095427
Gene Symbol
-
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Felis_catus
Status
putative
Strand
Minus strand
Length
15106 bases
Position
chrC1:30762788-30777893
Accession
101095427
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFCAP00000014147PABPPF00658.182e-3111
ENSFCAP00000036237PABPPF00658.182.2e-3111
ENSFCAP00000014147RRM_5PF13893.63.3e-0912
ENSFCAP00000014147RRM_5PF13893.63.3e-0922
ENSFCAP00000036237RRM_5PF13893.64.1e-0912
ENSFCAP00000036237RRM_5PF13893.64.1e-0922
ENSFCAP00000014147RRM_1PF00076.223.8e-9214
ENSFCAP00000014147RRM_1PF00076.223.8e-9224
ENSFCAP00000014147RRM_1PF00076.223.8e-9234
ENSFCAP00000014147RRM_1PF00076.223.8e-9244
ENSFCAP00000036237RRM_1PF00076.224.8e-9214
ENSFCAP00000036237RRM_1PF00076.224.8e-9224
ENSFCAP00000036237RRM_1PF00076.224.8e-9234
ENSFCAP00000036237RRM_1PF00076.224.8e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFCAT00000015258-2872XM_003989888ENSFCAP00000014147631 (aa)XP_003989937M3WM89
ENSFCAT00000047436-2959XM_003989886ENSFCAP00000036237660 (aa)XP_003989935A0A2I2UUL7
Gene Model
Click here to download ENSFCAG00000015254's gene model file
Pathways
Pathway IDPathway NameSource
fca03013RNA transportKEGG
fca03015mRNA surveillance pathwayKEGG
fca03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000015254's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFCAG00000015254-5931.579ENSFCAG00000011976ELAVL28634.940
ENSFCAG00000015254-5867.978ENSFCAG00000004998PABPC59667.769
ENSFCAG00000015254-6374.865ENSFCAG00000028270PABPC4L9974.865
ENSFCAG00000015254-5837.500ENSFCAG00000004738CELF25937.500
ENSFCAG00000015254-5833.553ENSFCAG00000034143ELAVL18233.065
ENSFCAG00000015254-5930.625ENSFCAG00000010438ELAVL49030.625
ENSFCAG00000015254-5431.646ENSFCAG00000040261HNRNPA05032.450
ENSFCAG00000015254-5730.370ENSFCAG00000023732TIA18530.189
ENSFCAG00000015254-9767.255ENSFCAG00000011692PABPC1L9967.255
ENSFCAG00000015254-5731.579ENSFCAG00000031690TIAL19730.682
ENSFCAG00000015254-9978.627ENSFCAG00000001874PABPC19978.471
ENSFCAG00000015254-5876.650ENSFCAG00000039701-9976.650
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFCAG00000015254-10099.242ENSG00000090621PABPC4100100.000Homo_sapiens
ENSFCAG00000015254-9983.043ENSAPOG00000001161pabpc410083.281Acanthochromis_polyacanthus
ENSFCAG00000015254-10099.697ENSAMEG00000011535-10099.697Ailuropoda_melanoleuca
ENSFCAG00000015254-9857.395ENSAMEG00000015083-9957.074Ailuropoda_melanoleuca
ENSFCAG00000015254-10083.594ENSACIG00000023343pabpc410084.219Amphilophus_citrinellus
ENSFCAG00000015254-9983.518ENSAOCG00000021529pabpc410083.750Amphiprion_ocellaris
ENSFCAG00000015254-9983.518ENSAPEG00000019196pabpc410083.750Amphiprion_percula
ENSFCAG00000015254-9982.622ENSATEG00000007402pabpc410082.071Anabas_testudineus
ENSFCAG00000015254-9991.587ENSAPLG00000009729-10091.587Anas_platyrhynchos
ENSFCAG00000015254-9989.982ENSACAG00000002544PABPC410089.982Anolis_carolinensis
ENSFCAG00000015254-10099.091ENSANAG00000025079PABPC410099.091Aotus_nancymaae
ENSFCAG00000015254-10083.125ENSACLG00000019558pabpc410083.204Astatotilapia_calliptera
ENSFCAG00000015254-9979.081ENSAMXG00000018779pabpc49979.873Astyanax_mexicanus
ENSFCAG00000015254-10096.823ENSBTAG00000017125PABPC410096.823Bos_taurus
ENSFCAG00000015254-5786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSFCAG00000015254-10098.939ENSCJAG00000002512-10098.939Callithrix_jacchus
ENSFCAG00000015254-7789.344ENSCJAG00000045953-9289.300Callithrix_jacchus
ENSFCAG00000015254-100100.000ENSCAFG00000003081PABPC4100100.000Canis_familiaris
ENSFCAG00000015254-10099.848ENSCAFG00020004161PABPC410099.848Canis_lupus_dingo
ENSFCAG00000015254-10076.667ENSCHIG00000023385-10076.667Capra_hircus
ENSFCAG00000015254-10099.394ENSCHIG00000019398-10099.394Capra_hircus
ENSFCAG00000015254-10099.242ENSTSYG00000006532PABPC410099.242Carlito_syrichta
ENSFCAG00000015254-9998.936ENSCAPG00000015984PABPC410098.936Cavia_aperea
ENSFCAG00000015254-10098.939ENSCPOG00000009552PABPC410098.939Cavia_porcellus
ENSFCAG00000015254-10099.091ENSCCAG00000037306PABPC410099.091Cebus_capucinus
ENSFCAG00000015254-10099.394ENSCATG00000042164PABPC410099.394Cercocebus_atys
ENSFCAG00000015254-10099.091ENSCLAG00000011899PABPC410099.091Chinchilla_lanigera
ENSFCAG00000015254-10099.394ENSCSAG00000001135PABPC410099.394Chlorocebus_sabaeus
ENSFCAG00000015254-8697.889ENSCHOG00000005327PABPC48197.889Choloepus_hoffmanni
ENSFCAG00000015254-9991.905ENSCPBG00000001038PABPC410091.905Chrysemys_picta_bellii
ENSFCAG00000015254-9999.232ENSCANG00000034177PABPC410099.232Colobus_angolensis_palliatus
ENSFCAG00000015254-10097.440ENSCGRG00001018166Pabpc410097.440Cricetulus_griseus_chok1gshd
ENSFCAG00000015254-9995.115ENSCGRG00000009777Pabpc410095.115Cricetulus_griseus_crigri
ENSFCAG00000015254-10082.500ENSCSEG00000000130pabpc410083.125Cynoglossus_semilaevis
ENSFCAG00000015254-9983.784ENSCVAG00000019246pabpc410083.861Cyprinodon_variegatus
ENSFCAG00000015254-9985.079ENSDARG00000059259pabpc410085.855Danio_rerio
ENSFCAG00000015254-9999.643ENSDNOG00000018444-10099.643Dasypus_novemcinctus
ENSFCAG00000015254-10096.818ENSDORG00000011581Pabpc410096.818Dipodomys_ordii
ENSFCAG00000015254-8665.000ENSETEG00000009172-9965.018Echinops_telfairi
ENSFCAG00000015254-100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSFCAG00000015254-9976.741ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSFCAG00000015254-9776.898ENSEBUG00000013782pabpc49976.266Eptatretus_burgeri
ENSFCAG00000015254-10099.697ENSEASG00005014119PABPC410099.697Equus_asinus_asinus
ENSFCAG00000015254-10099.697ENSECAG00000009396PABPC410099.697Equus_caballus
ENSFCAG00000015254-10096.061ENSEEUG00000002962PABPC410096.061Erinaceus_europaeus
ENSFCAG00000015254-9983.758ENSELUG00000003195pabpc49884.335Esox_lucius
ENSFCAG00000015254-9991.111ENSFALG00000000543PABPC410091.111Ficedula_albicollis
ENSFCAG00000015254-9067.078ENSFDAG00000010581-10063.025Fukomys_damarensis
ENSFCAG00000015254-10099.242ENSFDAG00000020016-10099.242Fukomys_damarensis
ENSFCAG00000015254-10083.568ENSFHEG00000007548pabpc49391.031Fundulus_heteroclitus
ENSFCAG00000015254-9982.808ENSGMOG00000019025pabpc49983.438Gadus_morhua
ENSFCAG00000015254-9992.063ENSGALG00000003800PABPC410092.063Gallus_gallus
ENSFCAG00000015254-10082.915ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSFCAG00000015254-10081.591ENSGACG00000007179pabpc410082.215Gasterosteus_aculeatus
ENSFCAG00000015254-9991.746ENSGAGG00000001888PABPC410091.746Gopherus_agassizii
ENSFCAG00000015254-10099.242ENSGGOG00000004002PABPC410099.242Gorilla_gorilla
ENSFCAG00000015254-10083.281ENSHBUG00000020206pabpc410083.359Haplochromis_burtoni
ENSFCAG00000015254-10099.394ENSHGLG00000011162PABPC410099.394Heterocephalus_glaber_female
ENSFCAG00000015254-10099.366ENSHGLG00100001580PABPC410099.366Heterocephalus_glaber_male
ENSFCAG00000015254-10082.160ENSHCOG00000012694pabpc410082.812Hippocampus_comes
ENSFCAG00000015254-9883.307ENSIPUG00000016620pabpc49983.333Ictalurus_punctatus
ENSFCAG00000015254-10096.970ENSSTOG00000010416PABPC410096.970Ictidomys_tridecemlineatus
ENSFCAG00000015254-10095.000ENSJJAG00000007781Pabpc410095.000Jaculus_jaculus
ENSFCAG00000015254-9991.076ENSKMAG00000013597pabpc49982.188Kryptolebias_marmoratus
ENSFCAG00000015254-10082.426ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSFCAG00000015254-9988.170ENSLACG00000011907PABPC410088.170Latimeria_chalumnae
ENSFCAG00000015254-9985.827ENSLOCG00000001877pabpc49986.614Lepisosteus_oculatus
ENSFCAG00000015254-10099.697ENSLAFG00000000151PABPC410099.697Loxodonta_africana
ENSFCAG00000015254-10099.394ENSMFAG00000041481PABPC410099.394Macaca_fascicularis
ENSFCAG00000015254-10099.394ENSMMUG00000007497PABPC410099.394Macaca_mulatta
ENSFCAG00000015254-10099.242ENSMNEG00000043054PABPC410099.242Macaca_nemestrina
ENSFCAG00000015254-10099.394ENSMLEG00000040716PABPC410099.394Mandrillus_leucophaeus
ENSFCAG00000015254-9982.884ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSFCAG00000015254-10082.969ENSMZEG00005006141pabpc410083.048Maylandia_zebra
ENSFCAG00000015254-9988.075ENSMGAG00000005408PABPC410088.075Meleagris_gallopavo
ENSFCAG00000015254-5781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSFCAG00000015254-7795.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSFCAG00000015254-7289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSFCAG00000015254-8996.441ENSMICG00000016633-10096.441Microcebus_murinus
ENSFCAG00000015254-9984.725ENSMICG00000036729-10085.258Microcebus_murinus
ENSFCAG00000015254-10097.892ENSMOCG00000006763Pabpc410097.892Microtus_ochrogaster
ENSFCAG00000015254-10080.503ENSMMOG00000002363pabpc49981.790Mola_mola
ENSFCAG00000015254-9889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSFCAG00000015254-5974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSFCAG00000015254-9982.780ENSMALG00000011017pabpc410082.481Monopterus_albus
ENSFCAG00000015254-9983.898MGP_CAROLIEiJ_G0024864-10083.898Mus_caroli
ENSFCAG00000015254-10097.727MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSFCAG00000015254-10098.182ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSFCAG00000015254-9997.849MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSFCAG00000015254-9978.900MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSFCAG00000015254-9553.477ENSMPUG00000006836-10053.311Mustela_putorius_furo
ENSFCAG00000015254-100100.000ENSMPUG00000014414-100100.000Mustela_putorius_furo
ENSFCAG00000015254-10096.830ENSMLUG00000012068PABPC410096.830Myotis_lucifugus
ENSFCAG00000015254-10096.970ENSNGAG00000018292Pabpc410096.970Nannospalax_galili
ENSFCAG00000015254-5992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSFCAG00000015254-6786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSFCAG00000015254-10099.366ENSNLEG00000011928PABPC410099.366Nomascus_leucogenys
ENSFCAG00000015254-8598.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSFCAG00000015254-5385.714ENSODEG00000013457-10085.714Octodon_degus
ENSFCAG00000015254-9989.733ENSODEG00000017434-10089.613Octodon_degus
ENSFCAG00000015254-10098.636ENSODEG00000006592-10098.636Octodon_degus
ENSFCAG00000015254-10083.281ENSONIG00000008176pabpc410083.906Oreochromis_niloticus
ENSFCAG00000015254-9991.429ENSOANG00000010001PABPC410091.429Ornithorhynchus_anatinus
ENSFCAG00000015254-9699.051ENSOCUG00000000562PABPC48899.051Oryctolagus_cuniculus
ENSFCAG00000015254-9991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSFCAG00000015254-9991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSFCAG00000015254-9991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSFCAG00000015254-9983.201ENSOMEG00000014410pabpc49983.648Oryzias_melastigma
ENSFCAG00000015254-10096.833ENSOGAG00000004067PABPC410096.833Otolemur_garnettii
ENSFCAG00000015254-10099.394ENSOARG00000020060PABPC410099.394Ovis_aries
ENSFCAG00000015254-10099.242ENSPPAG00000043625PABPC410099.242Pan_paniscus
ENSFCAG00000015254-100100.000ENSPPRG00000024727PABPC4100100.000Panthera_pardus
ENSFCAG00000015254-100100.000ENSPTIG00000005829PABPC4100100.000Panthera_tigris_altaica
ENSFCAG00000015254-10099.242ENSPTRG00000000573PABPC410099.242Pan_troglodytes
ENSFCAG00000015254-10099.545ENSPANG00000009484PABPC410099.545Papio_anubis
ENSFCAG00000015254-9984.968ENSPKIG00000025356pabpc49985.601Paramormyrops_kingsleyae
ENSFCAG00000015254-9991.905ENSPSIG00000016892PABPC410091.905Pelodiscus_sinensis
ENSFCAG00000015254-10081.732ENSPMGG00000009073pabpc49980.818Periophthalmus_magnuspinnatus
ENSFCAG00000015254-10091.212ENSPEMG00000024193-9991.212Peromyscus_maniculatus_bairdii
ENSFCAG00000015254-10097.424ENSPEMG00000023569-9997.424Peromyscus_maniculatus_bairdii
ENSFCAG00000015254-8973.657ENSPMAG00000002836pabpc410074.177Petromyzon_marinus
ENSFCAG00000015254-9571.107ENSPMAG00000007885pabpc410069.625Petromyzon_marinus
ENSFCAG00000015254-9894.033ENSPCIG00000020674PABPC410094.033Phascolarctos_cinereus
ENSFCAG00000015254-10082.942ENSPFOG00000002682pabpc410084.038Poecilia_formosa
ENSFCAG00000015254-10082.786ENSPLAG00000010112pabpc410083.333Poecilia_latipinna
ENSFCAG00000015254-9983.466ENSPMEG00000019739pabpc410084.194Poecilia_mexicana
ENSFCAG00000015254-10083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSFCAG00000015254-10099.242ENSPPYG00000001506PABPC410099.242Pongo_abelii
ENSFCAG00000015254-10094.697ENSPCAG00000003341PABPC410094.697Procavia_capensis
ENSFCAG00000015254-10099.395ENSPCOG00000023725-10099.395Propithecus_coquereli
ENSFCAG00000015254-9981.834ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSFCAG00000015254-9999.160ENSPVAG00000002187PABPC410099.160Pteropus_vampyrus
ENSFCAG00000015254-10083.125ENSPNYG00000006134pabpc410083.204Pundamilia_nyererei
ENSFCAG00000015254-10083.255ENSPNAG00000024355pabpc410083.956Pygocentrus_nattereri
ENSFCAG00000015254-10095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSFCAG00000015254-10093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSFCAG00000015254-10099.394ENSRBIG00000039761PABPC410099.394Rhinopithecus_bieti
ENSFCAG00000015254-10099.394ENSRROG00000033355PABPC410099.394Rhinopithecus_roxellana
ENSFCAG00000015254-10099.242ENSSBOG00000026193PABPC410099.242Saimiri_boliviensis_boliviensis
ENSFCAG00000015254-9892.395ENSSHAG00000018139PABPC410091.905Sarcophilus_harrisii
ENSFCAG00000015254-9985.878ENSSFOG00015023514pabpc49985.878Scleropages_formosus
ENSFCAG00000015254-9982.437ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSFCAG00000015254-9982.726ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSFCAG00000015254-9982.726ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSFCAG00000015254-10091.970ENSSARG00000000310PABPC410091.970Sorex_araneus
ENSFCAG00000015254-9990.159ENSSPUG00000003204PABPC410090.159Sphenodon_punctatus
ENSFCAG00000015254-9983.043ENSSPAG00000009252pabpc49983.176Stegastes_partitus
ENSFCAG00000015254-10099.545ENSSSCG00000003660-10099.545Sus_scrofa
ENSFCAG00000015254-8950.673ENSSSCG00000036170-9650.673Sus_scrofa
ENSFCAG00000015254-9987.746ENSTGUG00000001266PABPC410087.746Taeniopygia_guttata
ENSFCAG00000015254-10082.233ENSTRUG00000005907pabpc49982.862Takifugu_rubripes
ENSFCAG00000015254-10078.391ENSTNIG00000016902pabpc49978.391Tetraodon_nigroviridis
ENSFCAG00000015254-9988.235ENSTBEG00000009035PABPC410088.235Tupaia_belangeri
ENSFCAG00000015254-9983.908ENSTTRG00000014340PABPC410087.563Tursiops_truncatus
ENSFCAG00000015254-10099.842ENSUAMG00000000303PABPC410099.842Ursus_americanus
ENSFCAG00000015254-10099.697ENSUMAG00000019585PABPC410099.821Ursus_maritimus
ENSFCAG00000015254-8498.582ENSVPAG00000010041PABPC47798.582Vicugna_pacos
ENSFCAG00000015254-100100.000ENSVVUG00000005215PABPC4100100.000Vulpes_vulpes
ENSFCAG00000015254-6197.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSFCAG00000015254-9983.333ENSXETG00000010946pabpc410083.333Xenopus_tropicalis
ENSFCAG00000015254-9981.282ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSFCAG00000015254-10083.099ENSXMAG00000019007pabpc410083.178Xiphophorus_maculatus

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