EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000015513 (Gene tree)
Gene ID: 101083740
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 98491 bases
Position: chrF2:43190800-43289290
Accession: 101083740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000014386	ResIII	PF04851.15	2.6e-11	1	1
ENSFCAP00000040837	ResIII	PF04851.15	3.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000015517	-	3981	XM_023248147	ENSFCAP00000014386	726 (aa)	XP_023103915	M3WMS0
ENSFCAT00000060254	-	5021	XM_003999976	ENSFCAP00000040837	911 (aa)	XP_004000025	UPI000298B3BA

Gene Model

Click here to download ENSFCAG00000015513's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000015513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000015513	-	65	35.437	ENSFCAG00000005206	HELLS	64	35.437
ENSFCAG00000015513	-	90	44.113	ENSFCAG00000003444	RAD54L	84	44.113
ENSFCAG00000015513	-	69	31.335	ENSFCAG00000007777	CHD1L	50	31.335
ENSFCAG00000015513	-	68	31.579	ENSFCAG00000003958	SMARCAD1	85	31.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000015513	-	99	90.608	ENSG00000197275	RAD54B	99	87.349	Homo_sapiens
ENSFCAG00000015513	-	99	90.608	ENSG00000265817	FSBP	99	90.608	Homo_sapiens
ENSFCAG00000015513	-	100	95.179	ENSAMEG00000005834	-	100	93.963	Ailuropoda_melanoleuca
ENSFCAG00000015513	-	99	58.880	ENSACIG00000013005	rad54b	99	54.733	Amphilophus_citrinellus
ENSFCAG00000015513	-	99	59.946	ENSAOCG00000008523	rad54b	99	54.749	Amphiprion_ocellaris
ENSFCAG00000015513	-	99	59.072	ENSAPEG00000001673	rad54b	99	55.664	Amphiprion_percula
ENSFCAG00000015513	-	99	59.072	ENSATEG00000001527	rad54b	99	54.466	Anabas_testudineus
ENSFCAG00000015513	-	99	74.931	ENSAPLG00000014366	-	99	68.811	Anas_platyrhynchos
ENSFCAG00000015513	-	99	71.231	ENSACAG00000003671	-	99	71.429	Anolis_carolinensis
ENSFCAG00000015513	-	89	87.809	ENSANAG00000019528	-	99	87.809	Aotus_nancymaae
ENSFCAG00000015513	-	99	59.290	ENSACLG00000007826	rad54b	92	59.698	Astatotilapia_calliptera
ENSFCAG00000015513	-	99	57.967	ENSAMXG00000039985	rad54b	94	58.093	Astyanax_mexicanus
ENSFCAG00000015513	-	100	90.358	ENSBTAG00000000632	RAD54B	100	87.047	Bos_taurus
ENSFCAG00000015513	-	80	34.621	WBGene00013792	Y116A8C.13	98	32.609	Caenorhabditis_elegans
ENSFCAG00000015513	-	99	88.828	ENSCJAG00000000080	-	99	88.828	Callithrix_jacchus
ENSFCAG00000015513	-	100	92.700	ENSCAFG00000009179	RAD54B	99	90.889	Canis_familiaris
ENSFCAG00000015513	-	100	92.837	ENSCAFG00020012084	-	99	90.999	Canis_lupus_dingo
ENSFCAG00000015513	-	100	90.083	ENSCHIG00000008230	-	100	86.498	Capra_hircus
ENSFCAG00000015513	-	100	88.567	ENSTSYG00000013234	-	100	85.510	Carlito_syrichta
ENSFCAG00000015513	-	100	86.364	ENSCPOG00000011643	-	99	81.998	Cavia_porcellus
ENSFCAG00000015513	-	99	88.552	ENSCCAG00000011754	-	99	88.552	Cebus_capucinus
ENSFCAG00000015513	-	99	90.055	ENSCATG00000030661	-	99	90.055	Cercocebus_atys
ENSFCAG00000015513	-	99	87.431	ENSCLAG00000010476	-	99	82.747	Chinchilla_lanigera
ENSFCAG00000015513	-	99	89.779	ENSCSAG00000012712	-	99	86.469	Chlorocebus_sabaeus
ENSFCAG00000015513	-	99	75.344	ENSCPBG00000003204	-	99	69.729	Chrysemys_picta_bellii
ENSFCAG00000015513	-	99	90.193	ENSCANG00000017939	-	99	90.193	Colobus_angolensis_palliatus
ENSFCAG00000015513	-	100	82.806	ENSCGRG00001020184	Rad54b	100	78.642	Cricetulus_griseus_chok1gshd
ENSFCAG00000015513	-	100	81.431	ENSCGRG00000016752	Rad54b	100	77.437	Cricetulus_griseus_crigri
ENSFCAG00000015513	-	99	58.095	ENSCSEG00000001601	rad54b	93	58.595	Cynoglossus_semilaevis
ENSFCAG00000015513	-	99	61.339	ENSCVAG00000009200	rad54b	99	56.941	Cyprinodon_variegatus
ENSFCAG00000015513	-	100	57.959	ENSDARG00000092134	rad54b	100	61.137	Danio_rerio
ENSFCAG00000015513	-	99	87.190	ENSDNOG00000015535	-	99	83.662	Dasypus_novemcinctus
ENSFCAG00000015513	-	99	87.724	ENSDORG00000002492	Rad54b	100	82.566	Dipodomys_ordii
ENSFCAG00000015513	-	83	87.252	ENSETEG00000010605	-	100	81.139	Echinops_telfairi
ENSFCAG00000015513	-	99	50.340	ENSEBUG00000009104	rad54b	98	46.939	Eptatretus_burgeri
ENSFCAG00000015513	-	100	90.496	ENSEASG00005004021	-	100	87.797	Equus_asinus_asinus
ENSFCAG00000015513	-	100	90.771	ENSECAG00000021949	-	99	88.377	Equus_caballus
ENSFCAG00000015513	-	88	85.714	ENSEEUG00000008056	-	83	85.714	Erinaceus_europaeus
ENSFCAG00000015513	-	99	58.848	ENSELUG00000009287	rad54b	99	53.545	Esox_lucius
ENSFCAG00000015513	-	99	74.105	ENSFALG00000005467	-	99	67.497	Ficedula_albicollis
ENSFCAG00000015513	-	98	87.429	ENSFDAG00000020541	-	100	84.286	Fukomys_damarensis
ENSFCAG00000015513	-	99	57.609	ENSFHEG00000014382	rad54b	91	56.287	Fundulus_heteroclitus
ENSFCAG00000015513	-	99	56.233	ENSGMOG00000014774	rad54b	98	56.713	Gadus_morhua
ENSFCAG00000015513	-	99	73.691	ENSGALG00000043597	RAD54B	99	67.650	Gallus_gallus
ENSFCAG00000015513	-	99	59.918	ENSGAFG00000007901	rad54b	99	55.556	Gambusia_affinis
ENSFCAG00000015513	-	99	59.647	ENSGACG00000009128	rad54b	99	55.184	Gasterosteus_aculeatus
ENSFCAG00000015513	-	99	74.965	ENSGAGG00000018747	-	99	69.508	Gopherus_agassizii
ENSFCAG00000015513	-	100	90.358	ENSGGOG00000023516	-	100	86.828	Gorilla_gorilla
ENSFCAG00000015513	-	99	59.345	ENSHBUG00000016017	rad54b	99	54.234	Haplochromis_burtoni
ENSFCAG00000015513	-	100	85.929	ENSHGLG00000008263	RAD54B	99	82.789	Heterocephalus_glaber_female
ENSFCAG00000015513	-	100	84.824	ENSHGLG00100008108	-	99	82.035	Heterocephalus_glaber_male
ENSFCAG00000015513	-	99	58.207	ENSHCOG00000004764	rad54b	98	56.404	Hippocampus_comes
ENSFCAG00000015513	-	100	57.895	ENSIPUG00000018531	rad54b	99	52.526	Ictalurus_punctatus
ENSFCAG00000015513	-	99	88.333	ENSSTOG00000010791	-	99	83.885	Ictidomys_tridecemlineatus
ENSFCAG00000015513	-	100	85.537	ENSJJAG00000010314	Rad54b	100	81.140	Jaculus_jaculus
ENSFCAG00000015513	-	99	58.493	ENSKMAG00000004744	rad54b	99	54.208	Kryptolebias_marmoratus
ENSFCAG00000015513	-	99	68.966	ENSLACG00000000859	-	100	68.708	Latimeria_chalumnae
ENSFCAG00000015513	-	99	64.463	ENSLOCG00000010100	rad54b	98	62.380	Lepisosteus_oculatus
ENSFCAG00000015513	-	100	88.567	ENSLAFG00000015315	-	100	85.167	Loxodonta_africana
ENSFCAG00000015513	-	99	89.779	ENSMFAG00000031629	-	99	89.779	Macaca_fascicularis
ENSFCAG00000015513	-	99	89.779	ENSMMUG00000005659	-	99	86.469	Macaca_mulatta
ENSFCAG00000015513	-	99	89.779	ENSMNEG00000016408	-	99	86.469	Macaca_nemestrina
ENSFCAG00000015513	-	99	90.193	ENSMLEG00000006946	-	99	86.689	Mandrillus_leucophaeus
ENSFCAG00000015513	-	99	59.973	ENSMAMG00000012269	rad54b	99	55.448	Mastacembelus_armatus
ENSFCAG00000015513	-	99	59.290	ENSMZEG00005005281	rad54b	95	59.698	Maylandia_zebra
ENSFCAG00000015513	-	99	73.691	ENSMGAG00000012024	-	99	67.869	Meleagris_gallopavo
ENSFCAG00000015513	-	100	82.669	ENSMAUG00000013586	Rad54b	100	78.094	Mesocricetus_auratus
ENSFCAG00000015513	-	99	89.793	ENSMICG00000000754	-	99	83.626	Microcebus_murinus
ENSFCAG00000015513	-	100	81.319	ENSMOCG00000020035	Rad54b	99	77.352	Microtus_ochrogaster
ENSFCAG00000015513	-	99	58.187	ENSMMOG00000003394	rad54b	99	54.004	Mola_mola
ENSFCAG00000015513	-	99	79.034	ENSMODG00000007343	-	99	77.047	Monodelphis_domestica
ENSFCAG00000015513	-	89	59.845	ENSMALG00000001520	rad54b	99	59.845	Monopterus_albus
ENSFCAG00000015513	-	100	83.081	MGP_CAROLIEiJ_G0025810	Rad54b	100	78.751	Mus_caroli
ENSFCAG00000015513	-	100	82.920	ENSMUSG00000078773	Rad54b	100	78.289	Mus_musculus
ENSFCAG00000015513	-	100	83.333	MGP_PahariEiJ_G0023933	Rad54b	100	79.167	Mus_pahari
ENSFCAG00000015513	-	100	83.884	MGP_SPRETEiJ_G0026758	Rad54b	100	79.057	Mus_spretus
ENSFCAG00000015513	-	100	93.113	ENSMPUG00000008878	-	100	93.086	Mustela_putorius_furo
ENSFCAG00000015513	-	99	90.345	ENSMLUG00000008953	-	99	85.197	Myotis_lucifugus
ENSFCAG00000015513	-	100	86.202	ENSNGAG00000017537	Rad54b	100	81.808	Nannospalax_galili
ENSFCAG00000015513	-	99	59.508	ENSNBRG00000013394	rad54b	93	59.158	Neolamprologus_brichardi
ENSFCAG00000015513	-	99	90.470	ENSNLEG00000003062	-	99	90.470	Nomascus_leucogenys
ENSFCAG00000015513	-	78	77.950	ENSMEUG00000012426	-	71	74.590	Notamacropus_eugenii
ENSFCAG00000015513	-	100	85.950	ENSODEG00000019564	-	100	82.018	Octodon_degus
ENSFCAG00000015513	-	94	87.059	ENSODEG00000002650	-	96	85.890	Octodon_degus
ENSFCAG00000015513	-	99	59.781	ENSONIG00000006067	rad54b	99	55.447	Oreochromis_niloticus
ENSFCAG00000015513	-	100	76.754	ENSOANG00000011348	-	100	76.096	Ornithorhynchus_anatinus
ENSFCAG00000015513	-	100	88.154	ENSOCUG00000016478	-	99	83.443	Oryctolagus_cuniculus
ENSFCAG00000015513	-	99	61.088	ENSORLG00000008918	rad54b	99	63.020	Oryzias_latipes
ENSFCAG00000015513	-	89	63.174	ENSORLG00020012171	rad54b	99	63.174	Oryzias_latipes_hni
ENSFCAG00000015513	-	99	60.676	ENSORLG00015018536	rad54b	84	61.222	Oryzias_latipes_hsok
ENSFCAG00000015513	-	99	60.136	ENSOMEG00000004345	rad54b	99	60.077	Oryzias_melastigma
ENSFCAG00000015513	-	99	88.690	ENSOGAG00000007854	-	99	85.181	Otolemur_garnettii
ENSFCAG00000015513	-	100	89.394	ENSOARG00000007691	-	100	88.807	Ovis_aries
ENSFCAG00000015513	-	99	88.674	ENSPPAG00000029572	-	99	85.809	Pan_paniscus
ENSFCAG00000015513	-	100	99.036	ENSPPRG00000007571	-	100	99.036	Panthera_pardus
ENSFCAG00000015513	-	100	99.036	ENSPTIG00000012670	-	100	99.036	Panthera_tigris_altaica
ENSFCAG00000015513	-	99	90.470	ENSPTRG00000020427	-	99	90.470	Pan_troglodytes
ENSFCAG00000015513	-	99	90.193	ENSPANG00000019566	-	99	86.799	Papio_anubis
ENSFCAG00000015513	-	99	63.260	ENSPKIG00000014974	rad54b	99	58.388	Paramormyrops_kingsleyae
ENSFCAG00000015513	-	99	72.865	ENSPSIG00000002383	-	97	72.807	Pelodiscus_sinensis
ENSFCAG00000015513	-	100	83.219	ENSPEMG00000012133	Rad54b	100	79.189	Peromyscus_maniculatus_bairdii
ENSFCAG00000015513	-	99	57.687	ENSPMAG00000002916	rad54b	99	58.323	Petromyzon_marinus
ENSFCAG00000015513	-	99	80.000	ENSPCIG00000020151	-	94	77.778	Phascolarctos_cinereus
ENSFCAG00000015513	-	99	60.408	ENSPFOG00000023411	rad54b	99	55.249	Poecilia_formosa
ENSFCAG00000015513	-	99	60.680	ENSPLAG00000010430	rad54b	99	55.321	Poecilia_latipinna
ENSFCAG00000015513	-	99	60.598	ENSPMEG00000016873	rad54b	99	55.461	Poecilia_mexicana
ENSFCAG00000015513	-	99	60.437	ENSPREG00000018443	rad54b	99	55.917	Poecilia_reticulata
ENSFCAG00000015513	-	99	90.193	ENSPPYG00000018750	-	99	86.909	Pongo_abelii
ENSFCAG00000015513	-	99	89.931	ENSPCOG00000026845	-	99	89.931	Propithecus_coquereli
ENSFCAG00000015513	-	99	90.345	ENSPVAG00000000261	-	92	89.879	Pteropus_vampyrus
ENSFCAG00000015513	-	99	59.724	ENSPNYG00000018303	rad54b	95	60.102	Pundamilia_nyererei
ENSFCAG00000015513	-	99	58.912	ENSPNAG00000000295	rad54b	99	53.994	Pygocentrus_nattereri
ENSFCAG00000015513	-	100	80.880	ENSRNOG00000039949	Rad54b	100	75.794	Rattus_norvegicus
ENSFCAG00000015513	-	99	89.365	ENSRBIG00000020419	-	99	86.139	Rhinopithecus_bieti
ENSFCAG00000015513	-	99	89.365	ENSRROG00000039897	-	99	86.139	Rhinopithecus_roxellana
ENSFCAG00000015513	-	77	42.669	YBR073W	RDH54	61	42.669	Saccharomyces_cerevisiae
ENSFCAG00000015513	-	99	88.276	ENSSBOG00000028501	-	99	85.401	Saimiri_boliviensis_boliviensis
ENSFCAG00000015513	-	99	80.083	ENSSHAG00000017038	-	99	73.275	Sarcophilus_harrisii
ENSFCAG00000015513	-	81	65.306	ENSSFOG00015008483	rad54b	91	65.306	Scleropages_formosus
ENSFCAG00000015513	-	99	58.607	ENSSMAG00000018659	rad54b	100	53.788	Scophthalmus_maximus
ENSFCAG00000015513	-	98	59.835	ENSSDUG00000001122	rad54b	98	54.497	Seriola_dumerili
ENSFCAG00000015513	-	99	59.566	ENSSLDG00000013787	rad54b	99	54.346	Seriola_lalandi_dorsalis
ENSFCAG00000015513	-	99	73.140	ENSSPUG00000016497	-	99	67.689	Sphenodon_punctatus
ENSFCAG00000015513	-	99	59.673	ENSSPAG00000012800	rad54b	99	55.277	Stegastes_partitus
ENSFCAG00000015513	-	99	89.669	ENSSSCG00000006101	-	99	89.698	Sus_scrofa
ENSFCAG00000015513	-	99	73.901	ENSTGUG00000011880	-	99	67.135	Taeniopygia_guttata
ENSFCAG00000015513	-	99	59.615	ENSTRUG00000010015	rad54b	99	53.481	Takifugu_rubripes
ENSFCAG00000015513	-	99	85.517	ENSTTRG00000006312	-	100	83.754	Tursiops_truncatus
ENSFCAG00000015513	-	100	95.041	ENSUMAG00000016401	-	100	93.963	Ursus_maritimus
ENSFCAG00000015513	-	100	89.945	ENSVPAG00000003157	-	100	85.950	Vicugna_pacos
ENSFCAG00000015513	-	99	59.122	ENSXETG00000025924	rad54b	99	60.100	Xenopus_tropicalis
ENSFCAG00000015513	-	99	59.482	ENSXMAG00000013141	rad54b	99	55.229	Xiphophorus_maculatus