EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000015730 (Gene tree)
Gene ID: 101089807
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 15855 bases
Position: chrD3:72114252-72130106
Accession: 101089807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000041192	MBD	PF01429.19	2.8e-16	1	1
ENSFCAP00000034560	MBD	PF01429.19	3e-16	1	1
ENSFCAP00000033822	MBD	PF01429.19	3e-16	1	1
ENSFCAP00000030489	MBD	PF01429.19	3.2e-16	1	1
ENSFCAP00000027107	MBD	PF01429.19	3.6e-16	1	1
ENSFCAP00000014590	MBD	PF01429.19	3.8e-16	1	1
ENSFCAP00000027283	MBD	PF01429.19	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000035459	MBD1-201	1689	-	ENSFCAP00000033822	562 (aa)	-	A0A2I2UMQ3
ENSFCAT00000049083	MBD1-207	1707	-	ENSFCAP00000030489	568 (aa)	-	A0A2I2UDC9
ENSFCAT00000032735	MBD1-204	3704	XM_011288001	ENSFCAP00000027107	632 (aa)	XP_011286303	A0A2I2U3S5
ENSFCAT00000037442	MBD1-202	3514	-	ENSFCAP00000027283	839 (aa)	-	A0A2I2U4C0
ENSFCAT00000015734	MBD1-203	1974	XM_011287995	ENSFCAP00000014590	657 (aa)	XP_011286297	M3WN64
ENSFCAT00000061527	MBD1-206	3422	XM_011288006	ENSFCAP00000041192	538 (aa)	XP_011286308	UPI0005AC77E6
ENSFCAT00000047779	MBD1-205	3482	XM_019815269	ENSFCAP00000034560	558 (aa)	XP_019670828	A0A2I2UQ58

Gene Model

Click here to download ENSFCAG00000015730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000015730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000015730	MBD1	100	87.816	ENSG00000141644	MBD1	100	88.291	Homo_sapiens
ENSFCAG00000015730	MBD1	100	96.677	ENSAMEG00000000238	MBD1	96	96.677	Ailuropoda_melanoleuca
ENSFCAG00000015730	MBD1	51	50.562	ENSAOCG00000020272	mbd1b	52	32.710	Amphiprion_ocellaris
ENSFCAG00000015730	MBD1	51	50.562	ENSAPEG00000023230	mbd1b	52	32.018	Amphiprion_percula
ENSFCAG00000015730	MBD1	73	30.787	ENSATEG00000009608	mbd1b	52	31.963	Anabas_testudineus
ENSFCAG00000015730	MBD1	67	43.564	ENSACAG00000006091	-	100	44.068	Anolis_carolinensis
ENSFCAG00000015730	MBD1	100	86.867	ENSANAG00000036253	MBD1	100	87.342	Aotus_nancymaae
ENSFCAG00000015730	MBD1	60	33.251	ENSACLG00000021383	mbd1b	50	34.649	Astatotilapia_calliptera
ENSFCAG00000015730	MBD1	100	89.715	ENSBTAG00000003801	MBD1	100	89.241	Bos_taurus
ENSFCAG00000015730	MBD1	100	86.301	ENSCJAG00000004959	MBD1	100	86.758	Callithrix_jacchus
ENSFCAG00000015730	MBD1	100	95.253	ENSCAFG00000018928	MBD1	96	95.253	Canis_familiaris
ENSFCAG00000015730	MBD1	99	94.551	ENSCAFG00020024272	MBD1	100	95.179	Canis_lupus_dingo
ENSFCAG00000015730	MBD1	100	89.241	ENSCHIG00000021134	MBD1	100	88.924	Capra_hircus
ENSFCAG00000015730	MBD1	100	88.133	ENSTSYG00000000509	MBD1	100	87.658	Carlito_syrichta
ENSFCAG00000015730	MBD1	99	65.734	ENSCAPG00000015782	MBD1	100	61.669	Cavia_aperea
ENSFCAG00000015730	MBD1	100	72.546	ENSCPOG00000001671	MBD1	100	71.048	Cavia_porcellus
ENSFCAG00000015730	MBD1	100	84.932	ENSCCAG00000034600	MBD1	100	85.388	Cebus_capucinus
ENSFCAG00000015730	MBD1	100	88.133	ENSCATG00000029959	MBD1	100	88.608	Cercocebus_atys
ENSFCAG00000015730	MBD1	100	84.968	ENSCLAG00000007457	MBD1	92	83.866	Chinchilla_lanigera
ENSFCAG00000015730	MBD1	100	84.494	ENSCSAG00000018070	MBD1	98	88.215	Chlorocebus_sabaeus
ENSFCAG00000015730	MBD1	100	87.975	ENSCANG00000033425	MBD1	100	88.449	Colobus_angolensis_palliatus
ENSFCAG00000015730	MBD1	100	71.384	ENSCGRG00001014843	Mbd1	100	72.205	Cricetulus_griseus_chok1gshd
ENSFCAG00000015730	MBD1	99	61.863	ENSCGRG00000014135	Mbd1	100	57.919	Cricetulus_griseus_crigri
ENSFCAG00000015730	MBD1	100	82.278	ENSDNOG00000015998	MBD1	100	83.515	Dasypus_novemcinctus
ENSFCAG00000015730	MBD1	99	70.599	ENSDORG00000013917	Mbd1	100	74.576	Dipodomys_ordii
ENSFCAG00000015730	MBD1	100	92.089	ENSEASG00005003857	MBD1	100	92.224	Equus_asinus_asinus
ENSFCAG00000015730	MBD1	99	91.506	ENSECAG00000011497	MBD1	96	86.772	Equus_caballus
ENSFCAG00000015730	MBD1	99	79.751	ENSFDAG00000011085	MBD1	96	79.396	Fukomys_damarensis
ENSFCAG00000015730	MBD1	71	34.343	ENSFHEG00000020120	mbd1b	51	35.294	Fundulus_heteroclitus
ENSFCAG00000015730	MBD1	73	33.333	ENSGACG00000012106	-	51	46.392	Gasterosteus_aculeatus
ENSFCAG00000015730	MBD1	100	87.816	ENSGGOG00000016966	MBD1	100	88.291	Gorilla_gorilla
ENSFCAG00000015730	MBD1	60	33.085	ENSHBUG00000014270	mbd1b	50	34.211	Haplochromis_burtoni
ENSFCAG00000015730	MBD1	100	84.335	ENSHGLG00000008740	MBD1	100	84.019	Heterocephalus_glaber_female
ENSFCAG00000015730	MBD1	92	88.312	ENSHGLG00100005198	MBD1	100	84.273	Heterocephalus_glaber_male
ENSFCAG00000015730	MBD1	67	35.784	ENSHCOG00000009952	mbd1b	52	34.404	Hippocampus_comes
ENSFCAG00000015730	MBD1	60	40.397	ENSIPUG00000015243	-	50	39.735	Ictalurus_punctatus
ENSFCAG00000015730	MBD1	100	79.283	ENSSTOG00000007780	MBD1	98	82.285	Ictidomys_tridecemlineatus
ENSFCAG00000015730	MBD1	98	70.848	ENSJJAG00000022859	Mbd1	96	71.378	Jaculus_jaculus
ENSFCAG00000015730	MBD1	66	30.485	ENSKMAG00000020760	mbd1b	54	31.207	Kryptolebias_marmoratus
ENSFCAG00000015730	MBD1	96	37.072	ENSLACG00000002414	-	78	36.346	Latimeria_chalumnae
ENSFCAG00000015730	MBD1	99	72.973	ENSLAFG00000031328	MBD1	100	76.080	Loxodonta_africana
ENSFCAG00000015730	MBD1	100	88.608	ENSMFAG00000026335	MBD1	100	88.133	Macaca_fascicularis
ENSFCAG00000015730	MBD1	100	88.608	ENSMMUG00000009050	MBD1	100	88.133	Macaca_mulatta
ENSFCAG00000015730	MBD1	100	88.608	ENSMNEG00000038822	MBD1	100	88.133	Macaca_nemestrina
ENSFCAG00000015730	MBD1	100	87.975	ENSMLEG00000043121	MBD1	100	88.449	Mandrillus_leucophaeus
ENSFCAG00000015730	MBD1	66	31.409	ENSMAMG00000023341	-	64	36.058	Mastacembelus_armatus
ENSFCAG00000015730	MBD1	60	33.251	ENSMZEG00005010421	mbd1b	50	34.649	Maylandia_zebra
ENSFCAG00000015730	MBD1	100	86.256	ENSMICG00000006414	MBD1	100	86.256	Microcebus_murinus
ENSFCAG00000015730	MBD1	52	74.558	ENSMOCG00000011976	-	93	78.707	Microtus_ochrogaster
ENSFCAG00000015730	MBD1	68	44.703	ENSMODG00000001286	-	57	44.675	Monodelphis_domestica
ENSFCAG00000015730	MBD1	99	64.580	ENSMUSG00000024561	Mbd1	100	64.985	Mus_musculus
ENSFCAG00000015730	MBD1	100	64.787	MGP_PahariEiJ_G0019128	Mbd1	98	68.123	Mus_pahari
ENSFCAG00000015730	MBD1	98	65.941	MGP_SPRETEiJ_G0023304	Mbd1	99	67.747	Mus_spretus
ENSFCAG00000015730	MBD1	100	95.570	ENSMPUG00000008843	MBD1	96	95.570	Mustela_putorius_furo
ENSFCAG00000015730	MBD1	100	90.348	ENSMLUG00000008286	MBD1	98	87.926	Myotis_lucifugus
ENSFCAG00000015730	MBD1	98	69.324	ENSNGAG00000011412	Mbd1	96	68.804	Nannospalax_galili
ENSFCAG00000015730	MBD1	100	87.975	ENSNLEG00000011661	-	100	87.500	Nomascus_leucogenys
ENSFCAG00000015730	MBD1	98	72.647	ENSNLEG00000032711	-	100	66.819	Nomascus_leucogenys
ENSFCAG00000015730	MBD1	100	70.728	ENSOPRG00000007647	MBD1	88	95.745	Ochotona_princeps
ENSFCAG00000015730	MBD1	99	75.528	ENSODEG00000018451	MBD1	97	76.232	Octodon_degus
ENSFCAG00000015730	MBD1	60	33.499	ENSONIG00000020289	mbd1b	52	33.486	Oreochromis_niloticus
ENSFCAG00000015730	MBD1	85	45.617	ENSOANG00000014593	-	100	49.245	Ornithorhynchus_anatinus
ENSFCAG00000015730	MBD1	100	84.019	ENSOCUG00000006554	MBD1	100	84.019	Oryctolagus_cuniculus
ENSFCAG00000015730	MBD1	100	85.179	ENSOGAG00000003784	MBD1	96	85.179	Otolemur_garnettii
ENSFCAG00000015730	MBD1	100	89.100	ENSOARG00000004218	MBD1	95	88.784	Ovis_aries
ENSFCAG00000015730	MBD1	100	86.758	ENSPPAG00000038886	MBD1	100	87.367	Pan_paniscus
ENSFCAG00000015730	MBD1	100	99.842	ENSPPRG00000021387	MBD1	100	99.842	Panthera_pardus
ENSFCAG00000015730	MBD1	100	99.684	ENSPTIG00000021231	MBD1	100	99.684	Panthera_tigris_altaica
ENSFCAG00000015730	MBD1	100	87.658	ENSPTRG00000010021	MBD1	100	88.291	Pan_troglodytes
ENSFCAG00000015730	MBD1	100	87.816	ENSPANG00000010867	MBD1	100	88.291	Papio_anubis
ENSFCAG00000015730	MBD1	99	63.605	ENSPEMG00000022630	Mbd1	97	63.543	Peromyscus_maniculatus_bairdii
ENSFCAG00000015730	MBD1	96	47.735	ENSPCIG00000027937	-	79	47.644	Phascolarctos_cinereus
ENSFCAG00000015730	MBD1	61	53.846	ENSPMEG00000024145	mbd1b	52	51.546	Poecilia_mexicana
ENSFCAG00000015730	MBD1	100	85.443	ENSPPYG00000009158	MBD1	89	88.215	Pongo_abelii
ENSFCAG00000015730	MBD1	85	88.258	ENSPCAG00000001648	MBD1	93	88.258	Procavia_capensis
ENSFCAG00000015730	MBD1	99	87.805	ENSPCOG00000012450	MBD1	99	87.805	Propithecus_coquereli
ENSFCAG00000015730	MBD1	99	52.431	ENSRNOG00000024104	Mbd1	100	51.740	Rattus_norvegicus
ENSFCAG00000015730	MBD1	100	86.738	ENSRBIG00000041294	MBD1	100	87.276	Rhinopithecus_bieti
ENSFCAG00000015730	MBD1	100	87.500	ENSRROG00000032517	MBD1	100	87.975	Rhinopithecus_roxellana
ENSFCAG00000015730	MBD1	100	86.910	ENSSBOG00000027169	MBD1	100	86.454	Saimiri_boliviensis_boliviensis
ENSFCAG00000015730	MBD1	82	43.777	ENSSHAG00000003661	-	100	46.921	Sarcophilus_harrisii
ENSFCAG00000015730	MBD1	53	46.939	ENSSPAG00000021447	mbd1b	56	31.250	Stegastes_partitus
ENSFCAG00000015730	MBD1	100	90.706	ENSSSCG00000004516	MBD1	100	90.149	Sus_scrofa
ENSFCAG00000015730	MBD1	74	33.333	ENSTRUG00000013422	mbd1b	52	32.857	Takifugu_rubripes
ENSFCAG00000015730	MBD1	74	81.250	ENSTBEG00000012651	-	68	81.250	Tupaia_belangeri
ENSFCAG00000015730	MBD1	100	84.335	ENSTTRG00000015523	MBD1	98	88.384	Tursiops_truncatus
ENSFCAG00000015730	MBD1	99	90.865	ENSUAMG00000004752	MBD1	100	93.468	Ursus_americanus
ENSFCAG00000015730	MBD1	99	95.548	ENSUMAG00000002947	MBD1	98	96.465	Ursus_maritimus