EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000021942 (Gene tree)
Gene ID: 101091006
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 249 bases
Position: chrA2:117268266-117268514
Accession: 101091006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000018906	LSM	PF01423.22	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000030779	-	249	XM_011280432	ENSFCAP00000018906	82 (aa)	XP_011278734	M3WX17

Gene Model

Click here to download ENSFCAG00000021942's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000021942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000021942	-	98	66.667	ENSFCAG00000031148	-	69	62.667
ENSFCAG00000021942	-	80	53.030	ENSFCAG00000032773	-	94	53.030
ENSFCAG00000021942	-	90	46.753	ENSFCAG00000037511	-	71	52.459
ENSFCAG00000021942	-	87	76.000	ENSFCAG00000029966	-	87	76.000
ENSFCAG00000021942	-	76	42.424	ENSFCAG00000003047	LSM6	83	42.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000021942	-	87	76.000	ENSG00000139343	SNRPF	87	76.000	Homo_sapiens
ENSFCAG00000021942	-	85	72.973	ENSAPOG00000003377	snrpf	58	72.973	Acanthochromis_polyacanthus
ENSFCAG00000021942	-	85	75.676	ENSAMEG00000002166	-	87	75.676	Ailuropoda_melanoleuca
ENSFCAG00000021942	-	88	64.474	ENSAMEG00000018718	-	87	65.333	Ailuropoda_melanoleuca
ENSFCAG00000021942	-	84	72.603	ENSACIG00000013216	snrpf	86	72.603	Amphilophus_citrinellus
ENSFCAG00000021942	-	84	72.603	ENSAOCG00000015108	snrpf	86	72.603	Amphiprion_ocellaris
ENSFCAG00000021942	-	84	72.603	ENSAPEG00000022022	snrpf	86	72.603	Amphiprion_percula
ENSFCAG00000021942	-	84	72.603	ENSATEG00000022625	snrpf	78	72.603	Anabas_testudineus
ENSFCAG00000021942	-	85	74.324	ENSACAG00000014073	SNRPF	85	74.324	Anolis_carolinensis
ENSFCAG00000021942	-	87	76.000	ENSANAG00000032845	SNRPF	87	76.000	Aotus_nancymaae
ENSFCAG00000021942	-	82	67.606	ENSANAG00000020297	-	65	67.606	Aotus_nancymaae
ENSFCAG00000021942	-	87	53.333	ENSANAG00000025860	-	85	53.333	Aotus_nancymaae
ENSFCAG00000021942	-	84	72.603	ENSACLG00000016066	snrpf	86	72.603	Astatotilapia_calliptera
ENSFCAG00000021942	-	87	74.324	ENSAMXG00000007421	snrpf	87	74.324	Astyanax_mexicanus
ENSFCAG00000021942	-	90	73.077	ENSBTAG00000050012	-	93	72.000	Bos_taurus
ENSFCAG00000021942	-	87	76.000	ENSBTAG00000016271	SNRPF	87	76.000	Bos_taurus
ENSFCAG00000021942	-	89	51.948	WBGene00004918	snr-5	85	52.778	Caenorhabditis_elegans
ENSFCAG00000021942	-	87	76.000	ENSCJAG00000002705	-	87	76.000	Callithrix_jacchus
ENSFCAG00000021942	-	84	67.123	ENSCAFG00000031151	-	85	69.863	Canis_familiaris
ENSFCAG00000021942	-	87	76.000	ENSCAFG00000006395	-	68	76.000	Canis_familiaris
ENSFCAG00000021942	-	84	67.123	ENSCAFG00020010823	-	85	69.863	Canis_lupus_dingo
ENSFCAG00000021942	-	90	66.667	ENSCAFG00020013161	-	74	72.857	Canis_lupus_dingo
ENSFCAG00000021942	-	87	68.000	ENSTSYG00000030635	-	87	68.000	Carlito_syrichta
ENSFCAG00000021942	-	87	72.368	ENSTSYG00000036502	-	87	72.368	Carlito_syrichta
ENSFCAG00000021942	-	94	74.074	ENSTSYG00000031636	-	61	73.973	Carlito_syrichta
ENSFCAG00000021942	-	85	75.676	ENSCAPG00000007242	SNRPF	87	75.676	Cavia_aperea
ENSFCAG00000021942	-	87	76.000	ENSCPOG00000013898	SNRPF	87	76.000	Cavia_porcellus
ENSFCAG00000021942	-	100	70.930	ENSCCAG00000033627	-	59	69.333	Cebus_capucinus
ENSFCAG00000021942	-	87	76.000	ENSCCAG00000037378	-	87	76.000	Cebus_capucinus
ENSFCAG00000021942	-	100	77.907	ENSCCAG00000017356	-	87	76.000	Cebus_capucinus
ENSFCAG00000021942	-	87	76.000	ENSCLAG00000007200	SNRPF	87	76.000	Chinchilla_lanigera
ENSFCAG00000021942	-	87	76.000	ENSCSAG00000003602	-	61	76.000	Chlorocebus_sabaeus
ENSFCAG00000021942	-	77	79.365	ENSCHOG00000009392	SNRPF	98	79.365	Choloepus_hoffmanni
ENSFCAG00000021942	-	87	70.667	ENSCPBG00000006227	-	87	70.667	Chrysemys_picta_bellii
ENSFCAG00000021942	-	99	74.118	ENSCPBG00000024287	-	60	72.973	Chrysemys_picta_bellii
ENSFCAG00000021942	-	100	68.605	ENSCPBG00000001985	-	89	68.000	Chrysemys_picta_bellii
ENSFCAG00000021942	-	100	73.256	ENSCPBG00000026463	-	87	72.000	Chrysemys_picta_bellii
ENSFCAG00000021942	-	99	67.059	ENSCSAVG00000007498	-	84	66.216	Ciona_savignyi
ENSFCAG00000021942	-	87	76.000	ENSCGRG00001017100	-	87	76.000	Cricetulus_griseus_chok1gshd
ENSFCAG00000021942	-	87	69.333	ENSCGRG00001008965	-	58	69.333	Cricetulus_griseus_chok1gshd
ENSFCAG00000021942	-	87	76.000	ENSCGRG00000000336	-	87	76.000	Cricetulus_griseus_crigri
ENSFCAG00000021942	-	93	71.250	ENSCGRG00000018878	-	94	69.333	Cricetulus_griseus_crigri
ENSFCAG00000021942	-	87	73.333	ENSCSEG00000004748	snrpf	87	73.333	Cynoglossus_semilaevis
ENSFCAG00000021942	-	85	72.973	ENSCVAG00000000397	snrpf	59	72.973	Cyprinodon_variegatus
ENSFCAG00000021942	-	87	71.429	ENSDARG00000105037	snrpf	88	71.429	Danio_rerio
ENSFCAG00000021942	-	87	62.667	ENSDNOG00000049373	-	65	62.667	Dasypus_novemcinctus
ENSFCAG00000021942	-	87	74.667	ENSDNOG00000048989	-	67	74.667	Dasypus_novemcinctus
ENSFCAG00000021942	-	67	72.881	ENSDORG00000029740	-	72	72.881	Dipodomys_ordii
ENSFCAG00000021942	-	83	68.056	ENSDORG00000025351	-	100	68.056	Dipodomys_ordii
ENSFCAG00000021942	-	98	61.905	FBgn0000426	SmF	83	63.014	Drosophila_melanogaster
ENSFCAG00000021942	-	87	76.000	ENSETEG00000001558	-	87	76.000	Echinops_telfairi
ENSFCAG00000021942	-	94	60.759	ENSEBUG00000001793	-	63	72.881	Eptatretus_burgeri
ENSFCAG00000021942	-	87	76.000	ENSECAG00000019817	SNRPF	61	76.000	Equus_caballus
ENSFCAG00000021942	-	85	75.676	ENSEEUG00000013509	SNRPF	87	75.676	Erinaceus_europaeus
ENSFCAG00000021942	-	87	72.000	ENSELUG00000003121	RUXF	87	72.000	Esox_lucius
ENSFCAG00000021942	-	100	72.093	ENSELUG00000007737	RUXF	86	70.667	Esox_lucius
ENSFCAG00000021942	-	85	75.676	ENSFALG00000010799	SNRPF	86	75.676	Ficedula_albicollis
ENSFCAG00000021942	-	87	76.000	ENSFDAG00000002831	-	87	76.000	Fukomys_damarensis
ENSFCAG00000021942	-	85	72.973	ENSFHEG00000003240	snrpf	65	72.973	Fundulus_heteroclitus
ENSFCAG00000021942	-	85	72.973	ENSGMOG00000007741	snrpf	87	72.973	Gadus_morhua
ENSFCAG00000021942	-	87	76.000	ENSGALG00000011409	SNRPF	87	76.000	Gallus_gallus
ENSFCAG00000021942	-	84	72.603	ENSGAFG00000016187	snrpf	84	72.603	Gambusia_affinis
ENSFCAG00000021942	-	85	72.973	ENSGACG00000020055	snrpf	87	72.973	Gasterosteus_aculeatus
ENSFCAG00000021942	-	85	71.622	ENSGAGG00000012945	-	69	70.667	Gopherus_agassizii
ENSFCAG00000021942	-	76	77.419	ENSGAGG00000020974	-	52	77.419	Gopherus_agassizii
ENSFCAG00000021942	-	65	73.684	ENSGAGG00000011163	-	81	73.913	Gopherus_agassizii
ENSFCAG00000021942	-	77	71.429	ENSGAGG00000014132	-	76	71.429	Gopherus_agassizii
ENSFCAG00000021942	-	91	70.886	ENSGAGG00000022991	-	80	70.588	Gopherus_agassizii
ENSFCAG00000021942	-	98	66.667	ENSGGOG00000039936	-	83	62.667	Gorilla_gorilla
ENSFCAG00000021942	-	91	62.025	ENSGGOG00000039564	-	90	60.000	Gorilla_gorilla
ENSFCAG00000021942	-	87	76.000	ENSGGOG00000001127	-	87	76.000	Gorilla_gorilla
ENSFCAG00000021942	-	87	76.000	ENSHGLG00000009108	SNRPF	87	76.000	Heterocephalus_glaber_female
ENSFCAG00000021942	-	87	74.667	ENSHGLG00000021172	-	87	74.667	Heterocephalus_glaber_female
ENSFCAG00000021942	-	85	75.676	ENSHGLG00100008103	-	87	75.676	Heterocephalus_glaber_male
ENSFCAG00000021942	-	87	74.667	ENSHGLG00100019596	-	87	74.667	Heterocephalus_glaber_male
ENSFCAG00000021942	-	74	66.176	ENSHCOG00000018663	snrpf	53	66.176	Hippocampus_comes
ENSFCAG00000021942	-	87	73.333	ENSIPUG00000018994	snrpf	87	73.333	Ictalurus_punctatus
ENSFCAG00000021942	-	87	76.000	ENSSTOG00000010434	-	87	76.000	Ictidomys_tridecemlineatus
ENSFCAG00000021942	-	100	66.279	ENSJJAG00000010502	-	89	65.333	Jaculus_jaculus
ENSFCAG00000021942	-	100	61.628	ENSJJAG00000004558	-	89	60.000	Jaculus_jaculus
ENSFCAG00000021942	-	87	76.000	ENSJJAG00000011272	-	87	76.000	Jaculus_jaculus
ENSFCAG00000021942	-	77	73.134	ENSJJAG00000004828	-	86	71.429	Jaculus_jaculus
ENSFCAG00000021942	-	87	72.000	ENSKMAG00000013566	snrpf	87	72.000	Kryptolebias_marmoratus
ENSFCAG00000021942	-	87	73.333	ENSLBEG00000008800	snrpf	87	73.333	Labrus_bergylta
ENSFCAG00000021942	-	87	74.667	ENSLACG00000002456	-	64	74.667	Latimeria_chalumnae
ENSFCAG00000021942	-	87	72.000	ENSLOCG00000015744	snrpf	87	72.000	Lepisosteus_oculatus
ENSFCAG00000021942	-	85	75.676	ENSLAFG00000017426	SNRPF	86	75.676	Loxodonta_africana
ENSFCAG00000021942	-	84	72.603	ENSMAMG00000016593	snrpf	86	72.603	Mastacembelus_armatus
ENSFCAG00000021942	-	84	72.603	ENSMZEG00005014701	snrpf	86	72.603	Maylandia_zebra
ENSFCAG00000021942	-	84	75.342	ENSMGAG00000011453	-	66	75.342	Meleagris_gallopavo
ENSFCAG00000021942	-	87	70.667	ENSMAUG00000008799	-	87	70.667	Mesocricetus_auratus
ENSFCAG00000021942	-	72	74.603	ENSMAUG00000016909	-	85	74.603	Mesocricetus_auratus
ENSFCAG00000021942	-	72	74.603	ENSMAUG00000019737	-	85	74.603	Mesocricetus_auratus
ENSFCAG00000021942	-	65	75.439	ENSMAUG00000010289	-	61	76.087	Mesocricetus_auratus
ENSFCAG00000021942	-	87	76.000	ENSMICG00000012153	-	87	76.000	Microcebus_murinus
ENSFCAG00000021942	-	87	74.667	ENSMICG00000030494	-	60	74.667	Microcebus_murinus
ENSFCAG00000021942	-	87	76.000	ENSMOCG00000020437	Snrpf	87	76.000	Microtus_ochrogaster
ENSFCAG00000021942	-	76	65.152	ENSMOCG00000020220	-	84	65.152	Microtus_ochrogaster
ENSFCAG00000021942	-	87	66.667	ENSMOCG00000022166	-	82	66.667	Microtus_ochrogaster
ENSFCAG00000021942	-	85	73.973	ENSMMOG00000007127	snrpf	87	73.973	Mola_mola
ENSFCAG00000021942	-	87	76.000	ENSMODG00000008091	SNRPF	66	76.000	Monodelphis_domestica
ENSFCAG00000021942	-	84	72.603	ENSMALG00000012328	snrpf	86	72.603	Monopterus_albus
ENSFCAG00000021942	-	87	76.000	MGP_CAROLIEiJ_G0015735	-	87	76.000	Mus_caroli
ENSFCAG00000021942	-	87	76.000	ENSMUSG00000020018	Snrpf	87	76.000	Mus_musculus
ENSFCAG00000021942	-	87	76.000	MGP_PahariEiJ_G0031350	Snrpf	87	76.000	Mus_pahari
ENSFCAG00000021942	-	87	76.000	MGP_SPRETEiJ_G0016553	Snrpf	87	76.000	Mus_spretus
ENSFCAG00000021942	-	87	76.000	ENSMPUG00000007176	-	67	76.000	Mustela_putorius_furo
ENSFCAG00000021942	-	100	62.791	ENSMLUG00000026269	-	71	58.667	Myotis_lucifugus
ENSFCAG00000021942	-	87	76.000	ENSMLUG00000029201	-	71	76.000	Myotis_lucifugus
ENSFCAG00000021942	-	87	76.000	ENSMLUG00000027932	-	71	76.000	Myotis_lucifugus
ENSFCAG00000021942	-	87	76.000	ENSMLUG00000026149	-	71	76.000	Myotis_lucifugus
ENSFCAG00000021942	-	85	75.676	ENSMLUG00000013577	-	87	75.676	Myotis_lucifugus
ENSFCAG00000021942	-	72	66.667	ENSNGAG00000005851	-	71	65.000	Nannospalax_galili
ENSFCAG00000021942	-	87	76.000	ENSNGAG00000024292	-	87	76.000	Nannospalax_galili
ENSFCAG00000021942	-	85	72.973	ENSNBRG00000011682	snrpf	76	72.973	Neolamprologus_brichardi
ENSFCAG00000021942	-	87	76.000	ENSODEG00000010328	-	87	76.000	Octodon_degus
ENSFCAG00000021942	-	87	74.667	ENSOCUG00000010925	SNRPF	66	74.667	Oryctolagus_cuniculus
ENSFCAG00000021942	-	85	73.973	ENSORLG00020008216	snrpf	87	73.973	Oryzias_latipes_hni
ENSFCAG00000021942	-	85	73.973	ENSORLG00015007418	snrpf	87	73.973	Oryzias_latipes_hsok
ENSFCAG00000021942	-	84	72.603	ENSOMEG00000003018	snrpf	86	72.603	Oryzias_melastigma
ENSFCAG00000021942	-	87	76.000	ENSOGAG00000030323	-	87	76.000	Otolemur_garnettii
ENSFCAG00000021942	-	87	76.000	ENSOARG00000011853	-	65	76.000	Ovis_aries
ENSFCAG00000021942	-	98	66.667	ENSPPAG00000037544	-	83	62.667	Pan_paniscus
ENSFCAG00000021942	-	91	64.557	ENSPPAG00000037479	-	91	62.667	Pan_paniscus
ENSFCAG00000021942	-	87	76.000	ENSPPRG00000005875	-	87	76.000	Panthera_pardus
ENSFCAG00000021942	-	98	65.476	ENSPPRG00000007449	-	77	64.000	Panthera_pardus
ENSFCAG00000021942	-	98	67.857	ENSPTIG00000005117	-	89	64.000	Panthera_tigris_altaica
ENSFCAG00000021942	-	87	76.000	ENSPTIG00000007520	SNRPF	87	76.000	Panthera_tigris_altaica
ENSFCAG00000021942	-	98	66.667	ENSPTRG00000043814	-	83	62.667	Pan_troglodytes
ENSFCAG00000021942	-	91	64.557	ENSPTRG00000047717	-	91	62.667	Pan_troglodytes
ENSFCAG00000021942	-	85	72.973	ENSPKIG00000014784	snrpf	81	72.973	Paramormyrops_kingsleyae
ENSFCAG00000021942	-	85	75.676	ENSPSIG00000016462	SNRPF	86	75.676	Pelodiscus_sinensis
ENSFCAG00000021942	-	85	73.973	ENSPMGG00000023548	snrpf	87	73.973	Periophthalmus_magnuspinnatus
ENSFCAG00000021942	-	87	76.000	ENSPEMG00000023326	Snrpf	87	76.000	Peromyscus_maniculatus_bairdii
ENSFCAG00000021942	-	84	72.603	ENSPLAG00000023932	snrpf	86	72.603	Poecilia_latipinna
ENSFCAG00000021942	-	84	72.603	ENSPMEG00000003377	snrpf	86	72.603	Poecilia_mexicana
ENSFCAG00000021942	-	84	72.603	ENSPREG00000022635	snrpf	84	72.603	Poecilia_reticulata
ENSFCAG00000021942	-	87	76.000	ENSPPYG00000004847	-	87	76.000	Pongo_abelii
ENSFCAG00000021942	-	87	76.000	ENSPCOG00000023833	-	87	76.000	Propithecus_coquereli
ENSFCAG00000021942	-	87	76.000	ENSPVAG00000009036	SNRPF	87	76.000	Pteropus_vampyrus
ENSFCAG00000021942	-	84	72.603	ENSPNYG00000021712	snrpf	86	72.603	Pundamilia_nyererei
ENSFCAG00000021942	-	84	72.603	ENSPNAG00000019117	snrpf	86	72.603	Pygocentrus_nattereri
ENSFCAG00000021942	-	87	76.000	ENSRNOG00000005556	Snrpf	87	76.000	Rattus_norvegicus
ENSFCAG00000021942	-	87	73.333	ENSRBIG00000030414	-	87	73.333	Rhinopithecus_bieti
ENSFCAG00000021942	-	87	73.333	ENSRROG00000021975	-	87	73.333	Rhinopithecus_roxellana
ENSFCAG00000021942	-	80	49.296	YPR182W	SMX3	83	49.296	Saccharomyces_cerevisiae
ENSFCAG00000021942	-	87	62.821	ENSSBOG00000027638	-	88	62.821	Saimiri_boliviensis_boliviensis
ENSFCAG00000021942	-	87	62.667	ENSSBOG00000032297	-	86	62.667	Saimiri_boliviensis_boliviensis
ENSFCAG00000021942	-	87	76.000	ENSSBOG00000012868	-	87	76.000	Saimiri_boliviensis_boliviensis
ENSFCAG00000021942	-	87	76.000	ENSSBOG00000036179	-	87	76.000	Saimiri_boliviensis_boliviensis
ENSFCAG00000021942	-	85	75.676	ENSSHAG00000012294	SNRPF	67	75.676	Sarcophilus_harrisii
ENSFCAG00000021942	-	76	75.806	ENSSFOG00015021523	snrpf	93	75.806	Scleropages_formosus
ENSFCAG00000021942	-	87	72.000	ENSSMAG00000005533	snrpf	86	72.000	Scophthalmus_maximus
ENSFCAG00000021942	-	77	76.190	ENSSDUG00000016283	snrpf	75	76.190	Seriola_dumerili
ENSFCAG00000021942	-	93	53.750	ENSSLDG00000003885	-	90	55.405	Seriola_lalandi_dorsalis
ENSFCAG00000021942	-	87	72.000	ENSSLDG00000005119	snrpf	87	72.000	Seriola_lalandi_dorsalis
ENSFCAG00000021942	-	84	75.342	ENSSPUG00000014590	-	86	75.342	Sphenodon_punctatus
ENSFCAG00000021942	-	85	72.973	ENSSPAG00000003283	snrpf	84	72.973	Stegastes_partitus
ENSFCAG00000021942	-	87	76.000	ENSSSCG00000000895	SNRPF	87	76.000	Sus_scrofa
ENSFCAG00000021942	-	66	70.690	ENSTRUG00000014956	snrpf	84	70.690	Takifugu_rubripes
ENSFCAG00000021942	-	87	73.333	ENSTNIG00000012672	snrpf	87	73.333	Tetraodon_nigroviridis
ENSFCAG00000021942	-	52	76.744	ENSTTRG00000006070	SNRPF	50	76.744	Tursiops_truncatus
ENSFCAG00000021942	-	100	68.605	ENSUAMG00000001101	-	88	68.000	Ursus_americanus
ENSFCAG00000021942	-	87	76.000	ENSUAMG00000008176	-	87	76.000	Ursus_americanus
ENSFCAG00000021942	-	87	68.000	ENSUMAG00000006177	-	88	68.000	Ursus_maritimus
ENSFCAG00000021942	-	87	76.000	ENSUMAG00000003528	-	87	76.000	Ursus_maritimus
ENSFCAG00000021942	-	87	76.000	ENSVPAG00000008712	-	87	76.000	Vicugna_pacos
ENSFCAG00000021942	-	90	73.077	ENSVVUG00000023821	-	96	72.000	Vulpes_vulpes
ENSFCAG00000021942	-	85	53.165	ENSXETG00000021630	snrpf	87	53.165	Xenopus_tropicalis
ENSFCAG00000021942	-	84	72.603	ENSXCOG00000013860	snrpf	84	72.603	Xiphophorus_couchianus
ENSFCAG00000021942	-	84	72.603	ENSXMAG00000015448	snrpf	86	72.603	Xiphophorus_maculatus