EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000024460 (Gene tree)
Gene ID: 101088349
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 24269 bases
Position: chrC1:86061460-86085728
Accession: 101088349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000023260	RTC	PF01137.21	1.8e-87	1	1
ENSFCAP00000039466	RTC	PF01137.21	7e-82	1	1
ENSFCAP00000039466	RTC_insert	PF05189.13	4e-25	1	1
ENSFCAP00000023260	RTC_insert	PF05189.13	4.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000032755	RTCA-202	1137	-	ENSFCAP00000039466	378 (aa)	-	A0A2I2V4F1
ENSFCAT00000031812	RTCA-201	1776	XM_023258938	ENSFCAP00000023260	366 (aa)	XP_023114706	M3X9F8

Gene Model

Click here to download ENSFCAG00000024460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000024460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000024460	RTCA	100	95.082	ENSG00000137996	RTCA	100	95.918	Homo_sapiens
ENSFCAG00000024460	RTCA	99	72.022	ENSAPOG00000001345	rtca	98	72.022	Acanthochromis_polyacanthus
ENSFCAG00000024460	RTCA	73	97.770	ENSAMEG00000008855	RTCA	100	97.770	Ailuropoda_melanoleuca
ENSFCAG00000024460	RTCA	99	72.099	ENSACIG00000019643	rtca	99	72.099	Amphilophus_citrinellus
ENSFCAG00000024460	RTCA	100	71.311	ENSAOCG00000014979	rtca	99	71.311	Amphiprion_ocellaris
ENSFCAG00000024460	RTCA	100	71.311	ENSAPEG00000006945	rtca	99	71.311	Amphiprion_percula
ENSFCAG00000024460	RTCA	100	69.945	ENSATEG00000006315	rtca	100	69.945	Anabas_testudineus
ENSFCAG00000024460	RTCA	96	80.226	ENSAPLG00000015430	RTCA	100	80.226	Anas_platyrhynchos
ENSFCAG00000024460	RTCA	100	94.536	ENSANAG00000025446	RTCA	100	94.536	Aotus_nancymaae
ENSFCAG00000024460	RTCA	100	70.572	ENSACLG00000020770	rtca	99	70.572	Astatotilapia_calliptera
ENSFCAG00000024460	RTCA	100	73.224	ENSAMXG00000043271	rtca	100	73.224	Astyanax_mexicanus
ENSFCAG00000024460	RTCA	100	96.995	ENSBTAG00000006321	RTCA	100	96.995	Bos_taurus
ENSFCAG00000024460	RTCA	100	94.536	ENSCJAG00000003398	RTCA	100	94.536	Callithrix_jacchus
ENSFCAG00000024460	RTCA	100	98.634	ENSCAFG00000020010	RTCA	68	98.634	Canis_familiaris
ENSFCAG00000024460	RTCA	100	98.634	ENSCAFG00020011528	RTCA	57	98.634	Canis_lupus_dingo
ENSFCAG00000024460	RTCA	100	96.721	ENSCHIG00000018937	RTCA	100	96.721	Capra_hircus
ENSFCAG00000024460	RTCA	100	94.809	ENSTSYG00000011305	RTCA	100	94.809	Carlito_syrichta
ENSFCAG00000024460	RTCA	100	94.262	ENSCCAG00000021844	RTCA	100	94.262	Cebus_capucinus
ENSFCAG00000024460	RTCA	100	92.167	ENSCATG00000019364	RTCA	100	95.146	Cercocebus_atys
ENSFCAG00000024460	RTCA	87	94.953	ENSCLAG00000006125	RTCA	100	94.953	Chinchilla_lanigera
ENSFCAG00000024460	RTCA	100	95.355	ENSCSAG00000001509	RTCA	100	95.355	Chlorocebus_sabaeus
ENSFCAG00000024460	RTCA	99	95.055	ENSCHOG00000005211	RTCA	99	95.055	Choloepus_hoffmanni
ENSFCAG00000024460	RTCA	100	84.153	ENSCPBG00000026658	RTCA	100	84.153	Chrysemys_picta_bellii
ENSFCAG00000024460	RTCA	98	56.111	ENSCING00000007875	-	98	56.111	Ciona_intestinalis
ENSFCAG00000024460	RTCA	98	54.722	ENSCSAVG00000007269	-	98	54.722	Ciona_savignyi
ENSFCAG00000024460	RTCA	100	95.082	ENSCANG00000040106	RTCA	100	95.082	Colobus_angolensis_palliatus
ENSFCAG00000024460	RTCA	73	92.193	ENSCGRG00001013163	Rtca	85	92.193	Cricetulus_griseus_chok1gshd
ENSFCAG00000024460	RTCA	98	69.722	ENSCSEG00000000530	rtca	96	69.722	Cynoglossus_semilaevis
ENSFCAG00000024460	RTCA	100	59.836	ENSCVAG00000021809	rtca	100	59.836	Cyprinodon_variegatus
ENSFCAG00000024460	RTCA	100	73.770	ENSDARG00000002215	rtca	100	73.770	Danio_rerio
ENSFCAG00000024460	RTCA	99	95.330	ENSDNOG00000000456	RTCA	99	95.330	Dasypus_novemcinctus
ENSFCAG00000024460	RTCA	100	93.989	ENSDORG00000005448	Rtca	100	93.989	Dipodomys_ordii
ENSFCAG00000024460	RTCA	99	38.398	FBgn0025630	Rtca	99	38.398	Drosophila_melanogaster
ENSFCAG00000024460	RTCA	95	55.085	ENSEBUG00000008556	rtca	97	55.085	Eptatretus_burgeri
ENSFCAG00000024460	RTCA	100	96.175	ENSEASG00005015926	RTCA	100	96.175	Equus_asinus_asinus
ENSFCAG00000024460	RTCA	100	96.175	ENSECAG00000019831	RTCA	100	96.175	Equus_caballus
ENSFCAG00000024460	RTCA	91	84.682	ENSEEUG00000001165	RTCA	100	84.682	Erinaceus_europaeus
ENSFCAG00000024460	RTCA	99	72.022	ENSELUG00000003741	rtca	99	72.022	Esox_lucius
ENSFCAG00000024460	RTCA	93	82.059	ENSFALG00000002443	RTCA	91	82.059	Ficedula_albicollis
ENSFCAG00000024460	RTCA	100	95.082	ENSFDAG00000012070	-	100	95.082	Fukomys_damarensis
ENSFCAG00000024460	RTCA	98	73.204	ENSFDAG00000016084	-	100	73.204	Fukomys_damarensis
ENSFCAG00000024460	RTCA	70	62.500	ENSFHEG00000002868	rtca	90	72.596	Fundulus_heteroclitus
ENSFCAG00000024460	RTCA	100	69.126	ENSGMOG00000013264	rtca	100	69.126	Gadus_morhua
ENSFCAG00000024460	RTCA	100	83.060	ENSGALG00000005277	RTCA	100	83.060	Gallus_gallus
ENSFCAG00000024460	RTCA	100	71.585	ENSGAFG00000011853	rtca	99	71.585	Gambusia_affinis
ENSFCAG00000024460	RTCA	100	69.672	ENSGACG00000013497	rtca	100	69.672	Gasterosteus_aculeatus
ENSFCAG00000024460	RTCA	80	84.983	ENSGAGG00000023306	RTCA	100	84.983	Gopherus_agassizii
ENSFCAG00000024460	RTCA	100	95.082	ENSGGOG00000009546	-	100	95.082	Gorilla_gorilla
ENSFCAG00000024460	RTCA	100	94.262	ENSGGOG00000044018	-	100	94.262	Gorilla_gorilla
ENSFCAG00000024460	RTCA	100	70.300	ENSHBUG00000002114	rtca	99	70.300	Haplochromis_burtoni
ENSFCAG00000024460	RTCA	100	93.989	ENSHGLG00000002617	RTCA	100	93.989	Heterocephalus_glaber_female
ENSFCAG00000024460	RTCA	100	93.989	ENSHGLG00100006056	RTCA	100	93.989	Heterocephalus_glaber_male
ENSFCAG00000024460	RTCA	100	63.661	ENSHCOG00000020628	rtca	88	64.266	Hippocampus_comes
ENSFCAG00000024460	RTCA	100	73.497	ENSIPUG00000024803	rtca	100	73.497	Ictalurus_punctatus
ENSFCAG00000024460	RTCA	100	83.924	ENSSTOG00000033099	-	100	83.924	Ictidomys_tridecemlineatus
ENSFCAG00000024460	RTCA	100	88.251	ENSSTOG00000013528	-	100	88.251	Ictidomys_tridecemlineatus
ENSFCAG00000024460	RTCA	100	66.940	ENSJJAG00000016178	Rtca	100	66.940	Jaculus_jaculus
ENSFCAG00000024460	RTCA	99	72.299	ENSKMAG00000006651	rtca	98	72.299	Kryptolebias_marmoratus
ENSFCAG00000024460	RTCA	99	69.806	ENSLBEG00000028971	rtca	99	69.806	Labrus_bergylta
ENSFCAG00000024460	RTCA	88	69.470	ENSLBEG00000002448	-	99	69.470	Labrus_bergylta
ENSFCAG00000024460	RTCA	100	78.142	ENSLACG00000013666	RTCA	100	78.142	Latimeria_chalumnae
ENSFCAG00000024460	RTCA	100	72.951	ENSLOCG00000000093	rtca	99	72.951	Lepisosteus_oculatus
ENSFCAG00000024460	RTCA	100	94.536	ENSLAFG00000001473	RTCA	100	94.536	Loxodonta_africana
ENSFCAG00000024460	RTCA	100	95.355	ENSMFAG00000034132	RTCA	100	95.355	Macaca_fascicularis
ENSFCAG00000024460	RTCA	100	94.809	ENSMMUG00000019105	RTCA	100	94.809	Macaca_mulatta
ENSFCAG00000024460	RTCA	84	95.146	ENSMNEG00000037163	RTCA	100	95.146	Macaca_nemestrina
ENSFCAG00000024460	RTCA	100	78.689	ENSMLEG00000042151	RTCA	100	78.689	Mandrillus_leucophaeus
ENSFCAG00000024460	RTCA	100	73.497	ENSMAMG00000016536	rtca	100	73.497	Mastacembelus_armatus
ENSFCAG00000024460	RTCA	100	70.572	ENSMZEG00005017945	rtca	99	70.572	Maylandia_zebra
ENSFCAG00000024460	RTCA	87	81.505	ENSMGAG00000006892	RTCA	99	81.505	Meleagris_gallopavo
ENSFCAG00000024460	RTCA	100	92.077	ENSMAUG00000008488	Rtca	100	92.077	Mesocricetus_auratus
ENSFCAG00000024460	RTCA	84	96.117	ENSMICG00000008643	RTCA	100	96.117	Microcebus_murinus
ENSFCAG00000024460	RTCA	100	92.896	ENSMOCG00000016660	Rtca	100	92.896	Microtus_ochrogaster
ENSFCAG00000024460	RTCA	84	72.168	ENSMMOG00000007750	rtca	100	72.168	Mola_mola
ENSFCAG00000024460	RTCA	100	92.077	ENSMODG00000003557	RTCA	100	92.077	Monodelphis_domestica
ENSFCAG00000024460	RTCA	100	72.951	ENSMALG00000020844	rtca	100	72.951	Monopterus_albus
ENSFCAG00000024460	RTCA	100	92.077	MGP_CAROLIEiJ_G0025565	Rtca	100	92.077	Mus_caroli
ENSFCAG00000024460	RTCA	100	91.530	ENSMUSG00000000339	Rtca	100	91.549	Mus_musculus
ENSFCAG00000024460	RTCA	100	91.803	MGP_PahariEiJ_G0027011	Rtca	100	91.803	Mus_pahari
ENSFCAG00000024460	RTCA	100	91.803	MGP_SPRETEiJ_G0026515	Rtca	100	91.803	Mus_spretus
ENSFCAG00000024460	RTCA	100	98.907	ENSMPUG00000012119	RTCA	100	98.907	Mustela_putorius_furo
ENSFCAG00000024460	RTCA	100	88.556	ENSMLUG00000009922	RTCA	100	88.556	Myotis_lucifugus
ENSFCAG00000024460	RTCA	100	92.350	ENSNGAG00000011540	Rtca	99	92.350	Nannospalax_galili
ENSFCAG00000024460	RTCA	100	70.572	ENSNBRG00000003062	rtca	99	70.572	Neolamprologus_brichardi
ENSFCAG00000024460	RTCA	100	95.082	ENSNLEG00000031426	RTCA	100	95.082	Nomascus_leucogenys
ENSFCAG00000024460	RTCA	59	96.341	ENSMEUG00000010030	-	77	78.788	Notamacropus_eugenii
ENSFCAG00000024460	RTCA	73	89.591	ENSOPRG00000012092	RTCA	71	89.591	Ochotona_princeps
ENSFCAG00000024460	RTCA	95	94.540	ENSODEG00000006990	RTCA	96	94.587	Octodon_degus
ENSFCAG00000024460	RTCA	100	70.300	ENSONIG00000007753	rtca	99	70.300	Oreochromis_niloticus
ENSFCAG00000024460	RTCA	87	88.328	ENSOANG00000012055	RTCA	99	87.850	Ornithorhynchus_anatinus
ENSFCAG00000024460	RTCA	100	96.721	ENSOCUG00000014247	RTCA	100	96.721	Oryctolagus_cuniculus
ENSFCAG00000024460	RTCA	100	70.765	ENSORLG00000013605	rtca	100	70.765	Oryzias_latipes
ENSFCAG00000024460	RTCA	100	70.765	ENSORLG00020001904	rtca	100	70.765	Oryzias_latipes_hni
ENSFCAG00000024460	RTCA	100	70.765	ENSORLG00015021064	rtca	100	70.765	Oryzias_latipes_hsok
ENSFCAG00000024460	RTCA	100	71.311	ENSOMEG00000000756	rtca	100	71.311	Oryzias_melastigma
ENSFCAG00000024460	RTCA	100	86.066	ENSOGAG00000005627	RTCA	100	86.066	Otolemur_garnettii
ENSFCAG00000024460	RTCA	87	95.912	ENSOARG00000018122	RTCA	100	95.912	Ovis_aries
ENSFCAG00000024460	RTCA	100	91.645	ENSPPAG00000035119	RTCA	100	94.822	Pan_paniscus
ENSFCAG00000024460	RTCA	100	99.735	ENSPPRG00000000350	RTCA	100	99.735	Panthera_pardus
ENSFCAG00000024460	RTCA	100	99.735	ENSPTIG00000012816	RTCA	100	99.735	Panthera_tigris_altaica
ENSFCAG00000024460	RTCA	100	91.645	ENSPTRG00000001004	RTCA	100	94.822	Pan_troglodytes
ENSFCAG00000024460	RTCA	100	95.082	ENSPANG00000000346	RTCA	100	95.082	Papio_anubis
ENSFCAG00000024460	RTCA	100	74.590	ENSPKIG00000001653	rtca	100	74.590	Paramormyrops_kingsleyae
ENSFCAG00000024460	RTCA	100	84.426	ENSPSIG00000011408	RTCA	100	84.426	Pelodiscus_sinensis
ENSFCAG00000024460	RTCA	100	92.623	ENSPEMG00000018582	Rtca	100	92.623	Peromyscus_maniculatus_bairdii
ENSFCAG00000024460	RTCA	99	58.287	ENSPMAG00000009110	rtca	99	57.808	Petromyzon_marinus
ENSFCAG00000024460	RTCA	100	92.350	ENSPCIG00000007684	RTCA	100	92.350	Phascolarctos_cinereus
ENSFCAG00000024460	RTCA	100	71.935	ENSPFOG00000004824	rtca	100	71.935	Poecilia_formosa
ENSFCAG00000024460	RTCA	100	72.131	ENSPLAG00000011753	rtca	99	72.131	Poecilia_latipinna
ENSFCAG00000024460	RTCA	100	72.131	ENSPMEG00000020469	rtca	99	72.131	Poecilia_mexicana
ENSFCAG00000024460	RTCA	100	72.951	ENSPREG00000001365	rtca	99	72.951	Poecilia_reticulata
ENSFCAG00000024460	RTCA	100	95.082	ENSPPYG00000001115	RTCA	100	95.082	Pongo_abelii
ENSFCAG00000024460	RTCA	100	91.257	ENSPCAG00000005076	RTCA	100	91.257	Procavia_capensis
ENSFCAG00000024460	RTCA	100	97.268	ENSPCOG00000005603	RTCA	100	97.268	Propithecus_coquereli
ENSFCAG00000024460	RTCA	100	92.689	ENSPVAG00000009478	RTCA	100	92.689	Pteropus_vampyrus
ENSFCAG00000024460	RTCA	100	70.572	ENSPNYG00000004722	rtca	99	70.572	Pundamilia_nyererei
ENSFCAG00000024460	RTCA	100	73.224	ENSPNAG00000022270	rtca	100	73.224	Pygocentrus_nattereri
ENSFCAG00000024460	RTCA	100	92.350	ENSRNOG00000014575	Rtca	100	92.350	Rattus_norvegicus
ENSFCAG00000024460	RTCA	100	91.384	ENSRBIG00000041180	RTCA	100	94.175	Rhinopithecus_bieti
ENSFCAG00000024460	RTCA	100	94.536	ENSRROG00000024929	RTCA	100	94.536	Rhinopithecus_roxellana
ENSFCAG00000024460	RTCA	100	93.716	ENSSBOG00000028626	RTCA	100	93.716	Saimiri_boliviensis_boliviensis
ENSFCAG00000024460	RTCA	100	92.623	ENSSHAG00000001758	RTCA	100	92.623	Sarcophilus_harrisii
ENSFCAG00000024460	RTCA	98	69.444	ENSSMAG00000014680	rtca	97	69.444	Scophthalmus_maximus
ENSFCAG00000024460	RTCA	98	71.944	ENSSDUG00000015585	rtca	97	71.944	Seriola_dumerili
ENSFCAG00000024460	RTCA	96	72.365	ENSSLDG00000018985	rtca	95	72.365	Seriola_lalandi_dorsalis
ENSFCAG00000024460	RTCA	87	86.435	ENSSARG00000013993	RTCA	100	86.435	Sorex_araneus
ENSFCAG00000024460	RTCA	100	70.492	ENSSPAG00000011938	rtca	99	70.492	Stegastes_partitus
ENSFCAG00000024460	RTCA	100	96.995	ENSSSCG00000006865	RTCA	100	96.995	Sus_scrofa
ENSFCAG00000024460	RTCA	100	83.060	ENSTGUG00000005154	RTCA	100	83.060	Taeniopygia_guttata
ENSFCAG00000024460	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSFCAG00000024460	RTCA	100	72.404	ENSTNIG00000004725	rtca	100	72.404	Tetraodon_nigroviridis
ENSFCAG00000024460	RTCA	60	85.088	ENSTBEG00000000943	RTCA	82	66.387	Tupaia_belangeri
ENSFCAG00000024460	RTCA	100	93.211	ENSTTRG00000015327	RTCA	100	93.211	Tursiops_truncatus
ENSFCAG00000024460	RTCA	94	95.627	ENSUAMG00000017265	RTCA	96	95.627	Ursus_americanus
ENSFCAG00000024460	RTCA	100	97.814	ENSUMAG00000007881	RTCA	100	97.814	Ursus_maritimus
ENSFCAG00000024460	RTCA	87	86.435	ENSVPAG00000001039	RTCA	84	86.435	Vicugna_pacos
ENSFCAG00000024460	RTCA	100	98.361	ENSVVUG00000022041	RTCA	68	98.361	Vulpes_vulpes
ENSFCAG00000024460	RTCA	99	65.479	ENSXETG00000031661	RTCA	99	65.479	Xenopus_tropicalis
ENSFCAG00000024460	RTCA	100	62.568	ENSXCOG00000008002	rtca	100	62.568	Xiphophorus_couchianus
ENSFCAG00000024460	RTCA	100	71.858	ENSXMAG00000005482	rtca	99	71.858	Xiphophorus_maculatus