EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000024957 (Gene tree)
Gene ID: 101086415
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 36876 bases
Position: chrC2:74167880-74204755
Accession: 101086415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000020142	MMR_HSR1	PF01926.23	5.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000025559	LSG1-201	2430	XM_019839962	ENSFCAP00000020142	659 (aa)	XP_019695521	M3X0K0

Gene Model

Click here to download ENSFCAG00000024957's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000024957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000024957	LSG1	99	84.650	ENSG00000041802	LSG1	98	89.655	Homo_sapiens
ENSFCAG00000024957	LSG1	100	63.897	ENSAPOG00000009694	lsg1	100	63.705	Acanthochromis_polyacanthus
ENSFCAG00000024957	LSG1	100	89.242	ENSAMEG00000009343	LSG1	100	89.242	Ailuropoda_melanoleuca
ENSFCAG00000024957	LSG1	98	64.253	ENSACIG00000012406	lsg1	100	63.079	Amphilophus_citrinellus
ENSFCAG00000024957	LSG1	100	63.008	ENSAOCG00000016066	lsg1	100	63.293	Amphiprion_ocellaris
ENSFCAG00000024957	LSG1	100	64.048	ENSAPEG00000003252	lsg1	100	63.595	Amphiprion_percula
ENSFCAG00000024957	LSG1	98	64.706	ENSATEG00000011794	lsg1	100	64.599	Anabas_testudineus
ENSFCAG00000024957	LSG1	95	64.921	ENSACAG00000004222	LSG1	99	64.603	Anolis_carolinensis
ENSFCAG00000024957	LSG1	99	86.626	ENSANAG00000021153	LSG1	99	86.626	Aotus_nancymaae
ENSFCAG00000024957	LSG1	100	63.731	ENSACLG00000000520	lsg1	100	63.582	Astatotilapia_calliptera
ENSFCAG00000024957	LSG1	100	62.054	ENSAMXG00000008271	lsg1	100	62.908	Astyanax_mexicanus
ENSFCAG00000024957	LSG1	99	85.866	ENSBTAG00000008461	LSG1	99	85.866	Bos_taurus
ENSFCAG00000024957	LSG1	68	49.239	WBGene00016907	C53H9.2	93	53.846	Caenorhabditis_elegans
ENSFCAG00000024957	LSG1	99	86.322	ENSCJAG00000013962	LSG1	99	86.322	Callithrix_jacchus
ENSFCAG00000024957	LSG1	95	89.617	ENSCAFG00000013445	LSG1	100	89.617	Canis_familiaris
ENSFCAG00000024957	LSG1	100	88.369	ENSCAFG00020002216	LSG1	99	89.423	Canis_lupus_dingo
ENSFCAG00000024957	LSG1	100	85.736	ENSCHIG00000015769	LSG1	100	85.736	Capra_hircus
ENSFCAG00000024957	LSG1	99	85.410	ENSTSYG00000001447	LSG1	99	85.410	Carlito_syrichta
ENSFCAG00000024957	LSG1	95	76.948	ENSCAPG00000009856	LSG1	99	76.630	Cavia_aperea
ENSFCAG00000024957	LSG1	99	85.258	ENSCCAG00000035744	LSG1	99	85.258	Cebus_capucinus
ENSFCAG00000024957	LSG1	99	85.714	ENSCATG00000042060	LSG1	99	84.347	Cercocebus_atys
ENSFCAG00000024957	LSG1	99	86.170	ENSCSAG00000008796	LSG1	92	86.170	Chlorocebus_sabaeus
ENSFCAG00000024957	LSG1	100	69.138	ENSCPBG00000015941	LSG1	83	69.138	Chrysemys_picta_bellii
ENSFCAG00000024957	LSG1	70	63.158	ENSCING00000007079	-	97	63.158	Ciona_intestinalis
ENSFCAG00000024957	LSG1	76	54.694	ENSCSAVG00000002514	-	96	54.694	Ciona_savignyi
ENSFCAG00000024957	LSG1	99	85.562	ENSCANG00000030709	LSG1	99	85.562	Colobus_angolensis_palliatus
ENSFCAG00000024957	LSG1	99	82.094	ENSCGRG00001019846	Lsg1	99	82.094	Cricetulus_griseus_chok1gshd
ENSFCAG00000024957	LSG1	99	82.094	ENSCGRG00000014617	Lsg1	99	82.094	Cricetulus_griseus_crigri
ENSFCAG00000024957	LSG1	98	63.761	ENSCSEG00000008522	lsg1	100	63.118	Cynoglossus_semilaevis
ENSFCAG00000024957	LSG1	98	65.163	ENSCVAG00000002484	lsg1	100	64.371	Cyprinodon_variegatus
ENSFCAG00000024957	LSG1	100	66.063	ENSDARG00000015352	lsg1	100	65.861	Danio_rerio
ENSFCAG00000024957	LSG1	99	83.661	ENSDNOG00000006224	LSG1	99	83.359	Dasypus_novemcinctus
ENSFCAG00000024957	LSG1	82	59.426	FBgn0266284	Ns3	91	57.588	Drosophila_melanogaster
ENSFCAG00000024957	LSG1	88	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSFCAG00000024957	LSG1	88	56.208	ENSEBUG00000003119	lsg1	85	55.966	Eptatretus_burgeri
ENSFCAG00000024957	LSG1	99	88.602	ENSEASG00005000678	LSG1	99	88.602	Equus_asinus_asinus
ENSFCAG00000024957	LSG1	99	88.754	ENSECAG00000017659	LSG1	99	88.754	Equus_caballus
ENSFCAG00000024957	LSG1	87	80.342	ENSEEUG00000015217	LSG1	87	80.342	Erinaceus_europaeus
ENSFCAG00000024957	LSG1	100	60.483	ENSELUG00000023973	lsg1	100	60.784	Esox_lucius
ENSFCAG00000024957	LSG1	99	64.427	ENSFALG00000007210	LSG1	99	64.427	Ficedula_albicollis
ENSFCAG00000024957	LSG1	99	77.677	ENSFDAG00000017373	LSG1	99	77.677	Fukomys_damarensis
ENSFCAG00000024957	LSG1	97	63.467	ENSFHEG00000003680	lsg1	99	63.213	Fundulus_heteroclitus
ENSFCAG00000024957	LSG1	81	72.689	ENSGMOG00000015834	lsg1	91	69.868	Gadus_morhua
ENSFCAG00000024957	LSG1	99	64.448	ENSGALG00000007058	LSG1	87	64.653	Gallus_gallus
ENSFCAG00000024957	LSG1	97	64.241	ENSGAFG00000015831	lsg1	99	63.733	Gambusia_affinis
ENSFCAG00000024957	LSG1	98	62.730	ENSGACG00000009323	lsg1	100	61.955	Gasterosteus_aculeatus
ENSFCAG00000024957	LSG1	99	85.714	ENSGGOG00000000520	LSG1	99	85.714	Gorilla_gorilla
ENSFCAG00000024957	LSG1	100	64.018	ENSHBUG00000005659	lsg1	100	63.868	Haplochromis_burtoni
ENSFCAG00000024957	LSG1	99	75.566	ENSHGLG00000017390	LSG1	99	76.471	Heterocephalus_glaber_female
ENSFCAG00000024957	LSG1	99	75.566	ENSHGLG00100018587	LSG1	99	76.471	Heterocephalus_glaber_male
ENSFCAG00000024957	LSG1	98	62.906	ENSHCOG00000016848	lsg1	100	62.879	Hippocampus_comes
ENSFCAG00000024957	LSG1	100	64.502	ENSIPUG00000008631	lsg1	100	63.746	Ictalurus_punctatus
ENSFCAG00000024957	LSG1	81	77.844	ENSSTOG00000010234	LSG1	99	80.040	Ictidomys_tridecemlineatus
ENSFCAG00000024957	LSG1	99	79.123	ENSJJAG00000015513	Lsg1	99	79.123	Jaculus_jaculus
ENSFCAG00000024957	LSG1	98	61.978	ENSKMAG00000009681	lsg1	100	61.818	Kryptolebias_marmoratus
ENSFCAG00000024957	LSG1	98	62.693	ENSLBEG00000024261	lsg1	100	62.064	Labrus_bergylta
ENSFCAG00000024957	LSG1	100	65.821	ENSLACG00000013399	LSG1	100	65.471	Latimeria_chalumnae
ENSFCAG00000024957	LSG1	98	66.256	ENSLOCG00000004918	lsg1	100	65.710	Lepisosteus_oculatus
ENSFCAG00000024957	LSG1	99	83.131	ENSLAFG00000012919	-	99	83.131	Loxodonta_africana
ENSFCAG00000024957	LSG1	99	86.018	ENSMFAG00000039903	LSG1	99	84.650	Macaca_fascicularis
ENSFCAG00000024957	LSG1	99	86.018	ENSMMUG00000010708	LSG1	99	86.018	Macaca_mulatta
ENSFCAG00000024957	LSG1	99	85.714	ENSMNEG00000031538	LSG1	99	84.195	Macaca_nemestrina
ENSFCAG00000024957	LSG1	99	86.018	ENSMLEG00000041184	LSG1	99	86.018	Mandrillus_leucophaeus
ENSFCAG00000024957	LSG1	100	63.118	ENSMAMG00000000470	lsg1	100	62.669	Mastacembelus_armatus
ENSFCAG00000024957	LSG1	100	64.168	ENSMZEG00005017865	lsg1	100	64.018	Maylandia_zebra
ENSFCAG00000024957	LSG1	89	66.440	ENSMGAG00000007050	LSG1	99	66.440	Meleagris_gallopavo
ENSFCAG00000024957	LSG1	91	80.597	ENSMAUG00000016976	Lsg1	93	80.597	Mesocricetus_auratus
ENSFCAG00000024957	LSG1	99	83.435	ENSMICG00000049087	LSG1	99	83.435	Microcebus_murinus
ENSFCAG00000024957	LSG1	99	80.182	ENSMOCG00000022136	Lsg1	99	80.514	Microtus_ochrogaster
ENSFCAG00000024957	LSG1	83	73.000	ENSMMOG00000008884	lsg1	95	73.000	Mola_mola
ENSFCAG00000024957	LSG1	99	58.209	ENSMODG00000019828	LSG1	99	57.549	Monodelphis_domestica
ENSFCAG00000024957	LSG1	100	80.425	MGP_CAROLIEiJ_G0020648	Lsg1	100	80.577	Mus_caroli
ENSFCAG00000024957	LSG1	100	80.880	ENSMUSG00000022538	Lsg1	100	81.184	Mus_musculus
ENSFCAG00000024957	LSG1	98	81.664	MGP_PahariEiJ_G0016352	Lsg1	100	81.515	Mus_pahari
ENSFCAG00000024957	LSG1	100	80.577	MGP_SPRETEiJ_G0021544	Lsg1	100	80.728	Mus_spretus
ENSFCAG00000024957	LSG1	100	89.833	ENSMPUG00000003734	LSG1	100	89.833	Mustela_putorius_furo
ENSFCAG00000024957	LSG1	100	86.818	ENSMLUG00000012548	LSG1	100	86.818	Myotis_lucifugus
ENSFCAG00000024957	LSG1	99	80.243	ENSNGAG00000021872	Lsg1	99	80.243	Nannospalax_galili
ENSFCAG00000024957	LSG1	99	86.018	ENSNLEG00000008293	LSG1	99	86.018	Nomascus_leucogenys
ENSFCAG00000024957	LSG1	69	68.041	ENSMEUG00000009041	-	82	68.041	Notamacropus_eugenii
ENSFCAG00000024957	LSG1	100	63.433	ENSONIG00000002635	lsg1	100	64.103	Oreochromis_niloticus
ENSFCAG00000024957	LSG1	95	71.383	ENSOANG00000012742	LSG1	99	71.224	Ornithorhynchus_anatinus
ENSFCAG00000024957	LSG1	99	85.106	ENSOCUG00000004817	LSG1	99	85.106	Oryctolagus_cuniculus
ENSFCAG00000024957	LSG1	98	62.809	ENSORLG00000007695	lsg1	100	63.086	Oryzias_latipes
ENSFCAG00000024957	LSG1	98	62.229	ENSORLG00020016286	lsg1	100	61.619	Oryzias_latipes_hni
ENSFCAG00000024957	LSG1	98	62.848	ENSORLG00015012025	lsg1	100	62.367	Oryzias_latipes_hsok
ENSFCAG00000024957	LSG1	98	61.905	ENSOMEG00000022379	lsg1	100	61.898	Oryzias_melastigma
ENSFCAG00000024957	LSG1	99	84.743	ENSOGAG00000003475	LSG1	99	84.743	Otolemur_garnettii
ENSFCAG00000024957	LSG1	100	85.455	ENSOARG00000020403	LSG1	100	85.455	Ovis_aries
ENSFCAG00000024957	LSG1	99	85.410	ENSPPAG00000029271	LSG1	99	85.410	Pan_paniscus
ENSFCAG00000024957	LSG1	100	97.598	ENSPPRG00000010281	LSG1	100	97.598	Panthera_pardus
ENSFCAG00000024957	LSG1	100	98.634	ENSPTIG00000010789	LSG1	100	98.634	Panthera_tigris_altaica
ENSFCAG00000024957	LSG1	99	85.258	ENSPTRG00000015760	LSG1	99	85.258	Pan_troglodytes
ENSFCAG00000024957	LSG1	99	85.562	ENSPANG00000018249	LSG1	99	84.195	Papio_anubis
ENSFCAG00000024957	LSG1	97	64.341	ENSPKIG00000002895	lsg1	99	63.718	Paramormyrops_kingsleyae
ENSFCAG00000024957	LSG1	96	65.163	ENSPSIG00000009821	LSG1	100	64.541	Pelodiscus_sinensis
ENSFCAG00000024957	LSG1	95	64.127	ENSPMGG00000000931	lsg1	100	63.968	Periophthalmus_magnuspinnatus
ENSFCAG00000024957	LSG1	99	80.787	ENSPEMG00000012082	-	99	80.333	Peromyscus_maniculatus_bairdii
ENSFCAG00000024957	LSG1	99	58.621	ENSPMAG00000007451	lsg1	99	58.737	Petromyzon_marinus
ENSFCAG00000024957	LSG1	100	65.803	ENSPCIG00000013890	LSG1	82	65.803	Phascolarctos_cinereus
ENSFCAG00000024957	LSG1	97	65.319	ENSPFOG00000021882	lsg1	99	65.152	Poecilia_formosa
ENSFCAG00000024957	LSG1	97	64.852	ENSPLAG00000019536	lsg1	99	64.394	Poecilia_latipinna
ENSFCAG00000024957	LSG1	97	64.496	ENSPMEG00000017281	lsg1	99	64.350	Poecilia_mexicana
ENSFCAG00000024957	LSG1	97	55.231	ENSPREG00000006048	lsg1	99	54.955	Poecilia_reticulata
ENSFCAG00000024957	LSG1	92	84.704	ENSPPYG00000014425	LSG1	100	84.704	Pongo_abelii
ENSFCAG00000024957	LSG1	90	85.333	ENSPCAG00000005511	LSG1	90	85.333	Procavia_capensis
ENSFCAG00000024957	LSG1	99	84.650	ENSPCOG00000012360	LSG1	99	84.650	Propithecus_coquereli
ENSFCAG00000024957	LSG1	100	63.582	ENSPNYG00000021994	lsg1	100	63.433	Pundamilia_nyererei
ENSFCAG00000024957	LSG1	100	65.158	ENSPNAG00000015533	lsg1	100	64.902	Pygocentrus_nattereri
ENSFCAG00000024957	LSG1	100	81.297	ENSRNOG00000001727	Lsg1	100	81.448	Rattus_norvegicus
ENSFCAG00000024957	LSG1	99	84.802	ENSRBIG00000029053	LSG1	99	84.802	Rhinopithecus_bieti
ENSFCAG00000024957	LSG1	99	84.802	ENSRROG00000037702	LSG1	99	84.802	Rhinopithecus_roxellana
ENSFCAG00000024957	LSG1	65	57.485	YGL099W	LSG1	68	57.485	Saccharomyces_cerevisiae
ENSFCAG00000024957	LSG1	99	86.778	ENSSBOG00000034938	LSG1	99	86.778	Saimiri_boliviensis_boliviensis
ENSFCAG00000024957	LSG1	78	64.981	ENSSHAG00000003487	LSG1	100	63.722	Sarcophilus_harrisii
ENSFCAG00000024957	LSG1	98	64.000	ENSSFOG00015008955	lsg1	100	63.691	Scleropages_formosus
ENSFCAG00000024957	LSG1	98	64.275	ENSSDUG00000004622	lsg1	100	63.801	Seriola_dumerili
ENSFCAG00000024957	LSG1	98	64.154	ENSSLDG00000010869	lsg1	100	63.514	Seriola_lalandi_dorsalis
ENSFCAG00000024957	LSG1	81	83.333	ENSSARG00000012981	LSG1	81	83.333	Sorex_araneus
ENSFCAG00000024957	LSG1	100	68.413	ENSSPUG00000016347	LSG1	100	68.263	Sphenodon_punctatus
ENSFCAG00000024957	LSG1	100	84.825	ENSSSCG00000011827	LSG1	100	84.825	Sus_scrofa
ENSFCAG00000024957	LSG1	89	65.436	ENSTGUG00000009068	LSG1	100	64.597	Taeniopygia_guttata
ENSFCAG00000024957	LSG1	98	61.300	ENSTRUG00000017380	lsg1	100	60.091	Takifugu_rubripes
ENSFCAG00000024957	LSG1	98	64.606	ENSTNIG00000015570	lsg1	100	64.404	Tetraodon_nigroviridis
ENSFCAG00000024957	LSG1	100	78.030	ENSTTRG00000000559	LSG1	100	78.030	Tursiops_truncatus
ENSFCAG00000024957	LSG1	100	90.288	ENSUAMG00000012454	LSG1	100	90.288	Ursus_americanus
ENSFCAG00000024957	LSG1	100	90.288	ENSUMAG00000000855	LSG1	100	90.288	Ursus_maritimus
ENSFCAG00000024957	LSG1	95	81.470	ENSVPAG00000012400	LSG1	100	81.470	Vicugna_pacos
ENSFCAG00000024957	LSG1	95	88.498	ENSVVUG00000008956	LSG1	97	88.498	Vulpes_vulpes
ENSFCAG00000024957	LSG1	100	64.741	ENSXETG00000003451	lsg1	100	64.741	Xenopus_tropicalis
ENSFCAG00000024957	LSG1	97	64.142	ENSXCOG00000003239	lsg1	99	63.650	Xiphophorus_couchianus
ENSFCAG00000024957	LSG1	97	63.691	ENSXMAG00000005536	lsg1	99	63.220	Xiphophorus_maculatus