EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000025236 (Gene tree)
Gene ID: 101097775
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 196421 bases
Position: chrE3:24906872-25103292
Accession: 101097775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000035208	Ago_hook	PF10427.9	3.4e-19	1	1
ENSFCAP00000038624	Ago_hook	PF10427.9	9.8e-19	1	1
ENSFCAP00000020677	Ago_hook	PF10427.9	1.1e-18	1	1
ENSFCAP00000025965	Ago_hook	PF10427.9	8.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000041818	TNRC6A-204	5718	XM_019820784	ENSFCAP00000035208	1905 (aa)	XP_019676343	A0A2I2US95
ENSFCAT00000037618	TNRC6A-205	5688	XM_019820785	ENSFCAP00000037656	1895 (aa)	XP_019676344	A0A2I2UYN3
ENSFCAT00000032010	TNRC6A-202	6175	XM_023246343	ENSFCAP00000020677	1927 (aa)	XP_023102111	M3X231
ENSFCAT00000033145	TNRC6A-201	7794	XM_019820778	ENSFCAP00000038624	1954 (aa)	XP_019676337	A0A2I2V1F7
ENSFCAT00000048849	TNRC6A-203	5832	XM_019820779	ENSFCAP00000025965	1943 (aa)	XP_019676338	A0A2I2U0K9

Gene Model

Click here to download ENSFCAG00000025236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000025236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000025236	TNRC6A	99	42.892	ENSFCAG00000028358	TNRC6C	99	43.476
ENSFCAG00000025236	TNRC6A	98	36.408	ENSFCAG00000004791	TNRC6B	99	38.606

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000025236	TNRC6A	100	94.954	ENSG00000090905	TNRC6A	100	95.107	Homo_sapiens
ENSFCAG00000025236	TNRC6A	99	96.552	ENSAMEG00000009333	TNRC6A	100	96.552	Ailuropoda_melanoleuca
ENSFCAG00000025236	TNRC6A	99	81.861	ENSAPLG00000009978	TNRC6A	100	81.809	Anas_platyrhynchos
ENSFCAG00000025236	TNRC6A	100	55.409	ENSACAG00000011857	TNRC6A	100	57.094	Anolis_carolinensis
ENSFCAG00000025236	TNRC6A	100	95.248	ENSANAG00000025252	TNRC6A	100	95.248	Aotus_nancymaae
ENSFCAG00000025236	TNRC6A	92	56.926	ENSAMXG00000019919	tnrc6a	100	57.441	Astyanax_mexicanus
ENSFCAG00000025236	TNRC6A	100	94.593	ENSBTAG00000017999	TNRC6A	100	94.226	Bos_taurus
ENSFCAG00000025236	TNRC6A	100	94.817	ENSCJAG00000020677	TNRC6A	100	94.817	Callithrix_jacchus
ENSFCAG00000025236	TNRC6A	100	96.686	ENSCAFG00000017531	TNRC6A	100	96.679	Canis_familiaris
ENSFCAG00000025236	TNRC6A	99	94.581	ENSCAFG00020021160	TNRC6A	99	95.226	Canis_lupus_dingo
ENSFCAG00000025236	TNRC6A	100	94.541	ENSCHIG00000019448	TNRC6A	100	94.755	Capra_hircus
ENSFCAG00000025236	TNRC6A	100	94.740	ENSTSYG00000012711	TNRC6A	100	94.791	Carlito_syrichta
ENSFCAG00000025236	TNRC6A	99	94.485	ENSCPOG00000036684	TNRC6A	100	94.485	Cavia_porcellus
ENSFCAG00000025236	TNRC6A	100	95.457	ENSCCAG00000033664	TNRC6A	100	95.406	Cebus_capucinus
ENSFCAG00000025236	TNRC6A	99	95.376	ENSCATG00000019284	TNRC6A	99	95.376	Cercocebus_atys
ENSFCAG00000025236	TNRC6A	100	90.728	ENSCLAG00000010217	TNRC6A	100	90.728	Chinchilla_lanigera
ENSFCAG00000025236	TNRC6A	100	95.665	ENSCSAG00000006561	TNRC6A	100	95.665	Chlorocebus_sabaeus
ENSFCAG00000025236	TNRC6A	95	90.742	ENSCHOG00000009374	TNRC6A	95	90.742	Choloepus_hoffmanni
ENSFCAG00000025236	TNRC6A	90	81.939	ENSCPBG00000001881	TNRC6A	99	81.939	Chrysemys_picta_bellii
ENSFCAG00000025236	TNRC6A	100	96.016	ENSCANG00000041549	TNRC6A	100	96.016	Colobus_angolensis_palliatus
ENSFCAG00000025236	TNRC6A	100	93.078	ENSCGRG00001015021	Tnrc6a	100	93.026	Cricetulus_griseus_chok1gshd
ENSFCAG00000025236	TNRC6A	99	92.126	ENSCGRG00000013351	Tnrc6a	99	92.021	Cricetulus_griseus_crigri
ENSFCAG00000025236	TNRC6A	92	56.342	ENSDARG00000079688	tnrc6a	99	57.047	Danio_rerio
ENSFCAG00000025236	TNRC6A	99	92.831	ENSDNOG00000013989	TNRC6A	99	92.622	Dasypus_novemcinctus
ENSFCAG00000025236	TNRC6A	99	84.523	ENSETEG00000014658	TNRC6A	99	84.523	Echinops_telfairi
ENSFCAG00000025236	TNRC6A	100	95.396	ENSEASG00005017693	TNRC6A	100	95.810	Equus_asinus_asinus
ENSFCAG00000025236	TNRC6A	100	95.396	ENSECAG00000025056	TNRC6A	100	95.810	Equus_caballus
ENSFCAG00000025236	TNRC6A	99	89.080	ENSEEUG00000004530	TNRC6A	99	89.133	Erinaceus_europaeus
ENSFCAG00000025236	TNRC6A	99	79.255	ENSFALG00000003757	TNRC6A	99	80.203	Ficedula_albicollis
ENSFCAG00000025236	TNRC6A	92	79.888	ENSGALG00000006068	TNRC6A	99	82.651	Gallus_gallus
ENSFCAG00000025236	TNRC6A	90	81.264	ENSGAGG00000023209	TNRC6A	99	81.552	Gopherus_agassizii
ENSFCAG00000025236	TNRC6A	99	94.961	ENSGGOG00000005137	TNRC6A	99	95.013	Gorilla_gorilla
ENSFCAG00000025236	TNRC6A	99	92.895	ENSHGLG00000012474	-	100	92.579	Heterocephalus_glaber_female
ENSFCAG00000025236	TNRC6A	94	73.740	ENSHGLG00000007368	-	93	73.292	Heterocephalus_glaber_female
ENSFCAG00000025236	TNRC6A	99	92.263	ENSHGLG00100012496	-	100	92.158	Heterocephalus_glaber_male
ENSFCAG00000025236	TNRC6A	99	94.501	ENSSTOG00000023394	TNRC6A	99	94.501	Ictidomys_tridecemlineatus
ENSFCAG00000025236	TNRC6A	99	69.736	ENSLACG00000006277	TNRC6A	100	70.512	Latimeria_chalumnae
ENSFCAG00000025236	TNRC6A	100	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSFCAG00000025236	TNRC6A	98	93.975	ENSLAFG00000004209	TNRC6A	99	94.026	Loxodonta_africana
ENSFCAG00000025236	TNRC6A	99	93.809	ENSMFAG00000003824	TNRC6A	99	93.861	Macaca_fascicularis
ENSFCAG00000025236	TNRC6A	100	95.250	ENSMMUG00000020428	TNRC6A	100	95.301	Macaca_mulatta
ENSFCAG00000025236	TNRC6A	100	95.020	ENSMNEG00000034854	TNRC6A	100	95.020	Macaca_nemestrina
ENSFCAG00000025236	TNRC6A	99	93.773	ENSMLEG00000042737	TNRC6A	97	93.513	Mandrillus_leucophaeus
ENSFCAG00000025236	TNRC6A	99	80.000	ENSMGAG00000006455	TNRC6A	99	80.081	Meleagris_gallopavo
ENSFCAG00000025236	TNRC6A	100	93.235	ENSMAUG00000012750	Tnrc6a	100	93.183	Mesocricetus_auratus
ENSFCAG00000025236	TNRC6A	100	95.464	ENSMICG00000030685	TNRC6A	100	95.413	Microcebus_murinus
ENSFCAG00000025236	TNRC6A	100	93.442	ENSMOCG00000000152	Tnrc6a	100	93.284	Microtus_ochrogaster
ENSFCAG00000025236	TNRC6A	99	81.679	ENSMODG00000016348	TNRC6A	99	82.141	Monodelphis_domestica
ENSFCAG00000025236	TNRC6A	99	91.848	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	93.138	Mus_caroli
ENSFCAG00000025236	TNRC6A	100	92.760	ENSMUSG00000052707	Tnrc6a	99	93.710	Mus_musculus
ENSFCAG00000025236	TNRC6A	99	92.593	MGP_PahariEiJ_G0013635	Tnrc6a	100	93.853	Mus_pahari
ENSFCAG00000025236	TNRC6A	100	92.532	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.424	Mus_spretus
ENSFCAG00000025236	TNRC6A	97	84.644	ENSMPUG00000012324	TNRC6A	100	84.375	Mustela_putorius_furo
ENSFCAG00000025236	TNRC6A	99	93.368	ENSMLUG00000002701	TNRC6A	100	93.316	Myotis_lucifugus
ENSFCAG00000025236	TNRC6A	99	93.963	ENSNGAG00000020702	Tnrc6a	100	93.911	Nannospalax_galili
ENSFCAG00000025236	TNRC6A	99	92.569	ENSNLEG00000011851	TNRC6A	98	93.369	Nomascus_leucogenys
ENSFCAG00000025236	TNRC6A	77	89.037	ENSMEUG00000015959	-	77	89.037	Notamacropus_eugenii
ENSFCAG00000025236	TNRC6A	96	98.507	ENSOPRG00000005819	TNRC6A	96	98.507	Ochotona_princeps
ENSFCAG00000025236	TNRC6A	99	89.254	ENSODEG00000012802	TNRC6A	99	89.148	Octodon_degus
ENSFCAG00000025236	TNRC6A	89	83.082	ENSOANG00000007672	TNRC6A	100	83.615	Ornithorhynchus_anatinus
ENSFCAG00000025236	TNRC6A	99	91.956	ENSOCUG00000004325	TNRC6A	100	91.851	Oryctolagus_cuniculus
ENSFCAG00000025236	TNRC6A	99	95.464	ENSOGAG00000006666	TNRC6A	100	95.464	Otolemur_garnettii
ENSFCAG00000025236	TNRC6A	99	93.776	ENSOARG00000017950	TNRC6A	100	93.416	Ovis_aries
ENSFCAG00000025236	TNRC6A	99	94.707	ENSPPAG00000028379	TNRC6A	100	94.809	Pan_paniscus
ENSFCAG00000025236	TNRC6A	100	99.898	ENSPPRG00000005861	TNRC6A	100	99.898	Panthera_pardus
ENSFCAG00000025236	TNRC6A	100	98.450	ENSPTIG00000006346	TNRC6A	99	98.469	Panthera_tigris_altaica
ENSFCAG00000025236	TNRC6A	99	94.375	ENSPTRG00000007898	TNRC6A	99	94.375	Pan_troglodytes
ENSFCAG00000025236	TNRC6A	100	92.977	ENSPANG00000018523	TNRC6A	100	93.028	Papio_anubis
ENSFCAG00000025236	TNRC6A	90	78.054	ENSPKIG00000012859	tnrc6a	96	79.459	Paramormyrops_kingsleyae
ENSFCAG00000025236	TNRC6A	77	77.568	ENSPSIG00000003965	TNRC6A	100	77.568	Pelodiscus_sinensis
ENSFCAG00000025236	TNRC6A	100	93.127	ENSPEMG00000016318	Tnrc6a	100	93.382	Peromyscus_maniculatus_bairdii
ENSFCAG00000025236	TNRC6A	99	83.281	ENSPCIG00000012106	TNRC6A	100	83.922	Phascolarctos_cinereus
ENSFCAG00000025236	TNRC6A	99	94.597	ENSPPYG00000007202	TNRC6A	100	94.546	Pongo_abelii
ENSFCAG00000025236	TNRC6A	95	96.907	ENSPCAG00000008260	TNRC6A	94	96.907	Procavia_capensis
ENSFCAG00000025236	TNRC6A	100	93.014	ENSPCOG00000010134	TNRC6A	100	92.963	Propithecus_coquereli
ENSFCAG00000025236	TNRC6A	89	72.128	ENSPVAG00000012066	TNRC6A	99	71.855	Pteropus_vampyrus
ENSFCAG00000025236	TNRC6A	100	92.123	ENSRNOG00000024737	Tnrc6a	100	91.914	Rattus_norvegicus
ENSFCAG00000025236	TNRC6A	99	95.445	ENSRBIG00000014222	TNRC6A	99	95.497	Rhinopithecus_bieti
ENSFCAG00000025236	TNRC6A	100	95.959	ENSRROG00000032360	TNRC6A	100	95.959	Rhinopithecus_roxellana
ENSFCAG00000025236	TNRC6A	99	94.444	ENSSBOG00000036197	TNRC6A	100	96.255	Saimiri_boliviensis_boliviensis
ENSFCAG00000025236	TNRC6A	90	83.305	ENSSHAG00000008811	TNRC6A	99	83.761	Sarcophilus_harrisii
ENSFCAG00000025236	TNRC6A	89	67.365	ENSSFOG00015008920	tnrc6a	95	82.561	Scleropages_formosus
ENSFCAG00000025236	TNRC6A	73	82.971	ENSSARG00000002479	TNRC6A	89	82.246	Sorex_araneus
ENSFCAG00000025236	TNRC6A	92	78.288	ENSSPUG00000010525	TNRC6A	100	79.167	Sphenodon_punctatus
ENSFCAG00000025236	TNRC6A	100	94.883	ENSSSCG00000038870	TNRC6A	100	96.663	Sus_scrofa
ENSFCAG00000025236	TNRC6A	99	79.384	ENSTGUG00000006142	TNRC6A	100	80.219	Taeniopygia_guttata
ENSFCAG00000025236	TNRC6A	99	92.424	ENSTBEG00000014965	TNRC6A	99	92.420	Tupaia_belangeri
ENSFCAG00000025236	TNRC6A	94	97.411	ENSTTRG00000002008	TNRC6A	93	97.411	Tursiops_truncatus
ENSFCAG00000025236	TNRC6A	79	96.064	ENSUAMG00000006656	-	93	96.064	Ursus_americanus
ENSFCAG00000025236	TNRC6A	99	96.632	ENSUMAG00000008274	TNRC6A	100	97.227	Ursus_maritimus
ENSFCAG00000025236	TNRC6A	57	85.222	ENSVPAG00000010764	-	57	85.222	Vicugna_pacos
ENSFCAG00000025236	TNRC6A	100	96.530	ENSVVUG00000005380	TNRC6A	100	96.530	Vulpes_vulpes
ENSFCAG00000025236	TNRC6A	95	65.556	ENSXETG00000030437	TNRC6A	99	65.876	Xenopus_tropicalis