EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000027113 (Gene tree)
Gene ID: 101091959
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 151757 bases
Position: chrC1:129567549-129719305
Accession: 101091959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000039407	R3H	PF01424.22	2.1e-11	1	1
ENSFCAP00000050185	R3H	PF01424.22	2.1e-11	1	1
ENSFCAP00000034346	R3H	PF01424.22	2.2e-11	1	1
ENSFCAP00000016602	R3H	PF01424.22	2.3e-11	1	1
ENSFCAP00000046590	R3H	PF01424.22	2.3e-11	1	1
ENSFCAP00000026986	R3H	PF01424.22	2.4e-11	1	1
ENSFCAP00000043308	R3H	PF01424.22	2.4e-11	1	1
ENSFCAP00000051299	R3H	PF01424.22	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000062602	R3HDM1-205	6770	-	ENSFCAP00000046590	1099 (aa)	-	UPI0005ABD66F
ENSFCAT00000061180	R3HDM1-204	6821	XM_019838043	ENSFCAP00000051299	1116 (aa)	XP_019693602	UPI000948790D
ENSFCAT00000031735	R3HDM1-201	4739	XM_019838044	ENSFCAP00000016602	1099 (aa)	XP_019693603	M3WQH2
ENSFCAT00000048948	R3HDM1-207	6617	XM_019838049	ENSFCAP00000039407	1048 (aa)	XP_019693608	A0A2I2V3L4
ENSFCAT00000049113	R3HDM1-208	3132	XM_019838052	ENSFCAP00000034346	1043 (aa)	XP_019693611	A0A2I2U3F4
ENSFCAT00000059622	R3HDM1-203	6838	XM_019838041	ENSFCAP00000043308	1133 (aa)	XP_019693600	UPI0005ACF542
ENSFCAT00000035355	R3HDM1-202	6872	XM_011285215	ENSFCAP00000026986	1133 (aa)	XP_011283517	A0A2I2U3F4
ENSFCAT00000056750	R3HDM1-206	6638	XM_019838046	ENSFCAP00000050185	1055 (aa)	XP_019693605	UPI0003F1A6E2

Gene Model

Click here to download ENSFCAG00000027113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000027113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000027113	R3HDM1	99	50.835	ENSFCAG00000000192	R3HDM2	96	56.378
ENSFCAG00000027113	R3HDM1	67	52.618	ENSFCAG00000013391	ARPP21	92	53.236

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000027113	R3HDM1	100	94.923	ENSG00000048991	R3HDM1	100	97.790	Homo_sapiens
ENSFCAG00000027113	R3HDM1	88	62.053	ENSAPOG00000020850	r3hdm1	92	61.337	Acanthochromis_polyacanthus
ENSFCAG00000027113	R3HDM1	100	98.459	ENSAMEG00000014886	R3HDM1	100	98.459	Ailuropoda_melanoleuca
ENSFCAG00000027113	R3HDM1	88	61.814	ENSAOCG00000005192	r3hdm1	95	61.098	Amphiprion_ocellaris
ENSFCAG00000027113	R3HDM1	88	56.325	ENSAPEG00000016108	r3hdm1	95	56.325	Amphiprion_percula
ENSFCAG00000027113	R3HDM1	88	56.490	ENSATEG00000000232	r3hdm1	99	48.126	Anabas_testudineus
ENSFCAG00000027113	R3HDM1	100	79.801	ENSAPLG00000015231	R3HDM1	100	79.891	Anas_platyrhynchos
ENSFCAG00000027113	R3HDM1	100	85.468	ENSACAG00000001676	R3HDM1	100	80.351	Anolis_carolinensis
ENSFCAG00000027113	R3HDM1	100	95.199	ENSANAG00000035334	R3HDM1	100	96.961	Aotus_nancymaae
ENSFCAG00000027113	R3HDM1	88	49.195	ENSACLG00000027282	r3hdm1	89	68.269	Astatotilapia_calliptera
ENSFCAG00000027113	R3HDM1	100	72.837	ENSAMXG00000012861	R3HDM1	100	72.837	Astyanax_mexicanus
ENSFCAG00000027113	R3HDM1	88	74.684	ENSAMXG00000003536	r3hdm1	89	74.603	Astyanax_mexicanus
ENSFCAG00000027113	R3HDM1	61	40.313	ENSAMXG00000020587	arpp21	88	39.306	Astyanax_mexicanus
ENSFCAG00000027113	R3HDM1	100	97.537	ENSBTAG00000013302	R3HDM1	100	96.293	Bos_taurus
ENSFCAG00000027113	R3HDM1	100	95.191	ENSCJAG00000011718	R3HDM1	100	96.961	Callithrix_jacchus
ENSFCAG00000027113	R3HDM1	100	98.731	ENSCAFG00000005075	R3HDM1	100	98.731	Canis_familiaris
ENSFCAG00000027113	R3HDM1	100	99.754	ENSCAFG00020016119	R3HDM1	100	98.681	Canis_lupus_dingo
ENSFCAG00000027113	R3HDM1	100	97.783	ENSCHIG00000020851	R3HDM1	100	96.237	Capra_hircus
ENSFCAG00000027113	R3HDM1	100	93.596	ENSCPOG00000012784	R3HDM1	100	93.882	Cavia_porcellus
ENSFCAG00000027113	R3HDM1	100	94.938	ENSCCAG00000027199	R3HDM1	100	96.133	Cebus_capucinus
ENSFCAG00000027113	R3HDM1	100	97.044	ENSCATG00000023642	R3HDM1	100	97.238	Cercocebus_atys
ENSFCAG00000027113	R3HDM1	100	95.567	ENSCLAG00000007962	R3HDM1	100	95.062	Chinchilla_lanigera
ENSFCAG00000027113	R3HDM1	100	97.291	ENSCSAG00000016356	R3HDM1	100	94.371	Chlorocebus_sabaeus
ENSFCAG00000027113	R3HDM1	87	84.890	ENSCHOG00000013638	R3HDM1	91	84.753	Choloepus_hoffmanni
ENSFCAG00000027113	R3HDM1	87	91.144	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSFCAG00000027113	R3HDM1	100	96.798	ENSCANG00000034748	R3HDM1	100	96.961	Colobus_angolensis_palliatus
ENSFCAG00000027113	R3HDM1	99	95.813	ENSCGRG00001012357	R3hdm1	97	91.711	Cricetulus_griseus_chok1gshd
ENSFCAG00000027113	R3HDM1	100	95.813	ENSCGRG00000012080	R3hdm1	100	94.033	Cricetulus_griseus_crigri
ENSFCAG00000027113	R3HDM1	88	56.938	ENSCSEG00000008944	r3hdm1	85	64.918	Cynoglossus_semilaevis
ENSFCAG00000027113	R3HDM1	88	59.905	ENSCVAG00000007582	r3hdm1	91	58.950	Cyprinodon_variegatus
ENSFCAG00000027113	R3HDM1	62	38.808	ENSDARG00000061081	arpp21	64	43.277	Danio_rerio
ENSFCAG00000027113	R3HDM1	100	92.134	ENSDNOG00000000771	R3HDM1	100	92.134	Dasypus_novemcinctus
ENSFCAG00000027113	R3HDM1	92	93.120	ENSETEG00000013606	R3HDM1	90	94.118	Echinops_telfairi
ENSFCAG00000027113	R3HDM1	65	41.522	ENSEBUG00000014746	arpp21	97	43.838	Eptatretus_burgeri
ENSFCAG00000027113	R3HDM1	100	97.543	ENSEASG00005007392	R3HDM1	100	97.543	Equus_asinus_asinus
ENSFCAG00000027113	R3HDM1	100	97.457	ENSECAG00000019114	R3HDM1	100	99.015	Equus_caballus
ENSFCAG00000027113	R3HDM1	91	88.192	ENSEEUG00000012589	R3HDM1	91	87.823	Erinaceus_europaeus
ENSFCAG00000027113	R3HDM1	85	70.294	ENSELUG00000004909	R3HDM1	99	55.524	Esox_lucius
ENSFCAG00000027113	R3HDM1	92	52.249	ENSELUG00000014413	r3hdm1	100	51.161	Esox_lucius
ENSFCAG00000027113	R3HDM1	75	75.556	ENSFALG00000013731	R3HDM1	93	61.470	Ficedula_albicollis
ENSFCAG00000027113	R3HDM1	100	96.059	ENSFDAG00000016478	R3HDM1	100	95.473	Fukomys_damarensis
ENSFCAG00000027113	R3HDM1	88	60.859	ENSFHEG00000018713	r3hdm1	91	59.905	Fundulus_heteroclitus
ENSFCAG00000027113	R3HDM1	59	69.348	ENSGMOG00000006042	-	74	69.565	Gadus_morhua
ENSFCAG00000027113	R3HDM1	100	71.661	ENSGALG00000012246	R3HDM1	99	90.625	Gallus_gallus
ENSFCAG00000027113	R3HDM1	78	68.608	ENSGAFG00000006203	r3hdm1	89	68.608	Gambusia_affinis
ENSFCAG00000027113	R3HDM1	86	66.379	ENSGACG00000014925	r3hdm1	94	66.569	Gasterosteus_aculeatus
ENSFCAG00000027113	R3HDM1	100	78.876	ENSGAGG00000007840	R3HDM1	100	78.332	Gopherus_agassizii
ENSFCAG00000027113	R3HDM1	100	94.560	ENSGGOG00000008156	R3HDM1	100	97.790	Gorilla_gorilla
ENSFCAG00000027113	R3HDM1	100	95.567	ENSHGLG00000015718	R3HDM1	100	94.856	Heterocephalus_glaber_female
ENSFCAG00000027113	R3HDM1	100	95.320	ENSHGLG00100003184	-	100	94.856	Heterocephalus_glaber_male
ENSFCAG00000027113	R3HDM1	100	72.848	ENSHGLG00100015374	-	100	73.037	Heterocephalus_glaber_male
ENSFCAG00000027113	R3HDM1	78	65.909	ENSHCOG00000013366	r3hdm1	85	66.883	Hippocampus_comes
ENSFCAG00000027113	R3HDM1	89	68.923	ENSIPUG00000013629	r3hdm1	95	69.775	Ictalurus_punctatus
ENSFCAG00000027113	R3HDM1	76	75.079	ENSIPUG00000001676	R3HDM1	99	66.507	Ictalurus_punctatus
ENSFCAG00000027113	R3HDM1	59	41.003	ENSIPUG00000020552	arpp21	84	44.262	Ictalurus_punctatus
ENSFCAG00000027113	R3HDM1	100	96.798	ENSSTOG00000007572	R3HDM1	100	96.502	Ictidomys_tridecemlineatus
ENSFCAG00000027113	R3HDM1	95	83.799	ENSLACG00000005334	R3HDM1	100	74.340	Latimeria_chalumnae
ENSFCAG00000027113	R3HDM1	100	76.513	ENSLOCG00000001641	r3hdm1	100	66.436	Lepisosteus_oculatus
ENSFCAG00000027113	R3HDM1	100	95.335	ENSLAFG00000009065	R3HDM1	100	95.246	Loxodonta_africana
ENSFCAG00000027113	R3HDM1	100	94.742	ENSMFAG00000030331	R3HDM1	100	97.790	Macaca_fascicularis
ENSFCAG00000027113	R3HDM1	100	94.560	ENSMMUG00000009844	R3HDM1	100	97.790	Macaca_mulatta
ENSFCAG00000027113	R3HDM1	100	94.560	ENSMNEG00000027793	R3HDM1	100	97.790	Macaca_nemestrina
ENSFCAG00000027113	R3HDM1	100	94.832	ENSMLEG00000043189	R3HDM1	100	97.790	Mandrillus_leucophaeus
ENSFCAG00000027113	R3HDM1	88	60.911	ENSMAMG00000004532	r3hdm1	91	60.911	Mastacembelus_armatus
ENSFCAG00000027113	R3HDM1	88	61.176	ENSMZEG00005003157	r3hdm1	89	68.269	Maylandia_zebra
ENSFCAG00000027113	R3HDM1	100	79.329	ENSMGAG00000012461	R3HDM1	100	79.238	Meleagris_gallopavo
ENSFCAG00000027113	R3HDM1	100	96.305	ENSMAUG00000010315	R3hdm1	100	93.416	Mesocricetus_auratus
ENSFCAG00000027113	R3HDM1	100	94.027	ENSMICG00000005900	-	100	96.961	Microcebus_murinus
ENSFCAG00000027113	R3HDM1	95	85.344	ENSMICG00000042655	-	100	96.685	Microcebus_murinus
ENSFCAG00000027113	R3HDM1	89	88.517	ENSMODG00000000923	R3HDM1	97	81.697	Monodelphis_domestica
ENSFCAG00000027113	R3HDM1	99	46.494	ENSMALG00000009000	r3hdm1	91	60.000	Monopterus_albus
ENSFCAG00000027113	R3HDM1	100	95.074	MGP_CAROLIEiJ_G0014543	R3hdm1	100	94.561	Mus_caroli
ENSFCAG00000027113	R3HDM1	100	95.074	ENSMUSG00000056211	R3hdm1	100	94.561	Mus_musculus
ENSFCAG00000027113	R3HDM1	100	94.828	MGP_PahariEiJ_G0027779	R3hdm1	100	94.561	Mus_pahari
ENSFCAG00000027113	R3HDM1	100	95.074	MGP_SPRETEiJ_G0015350	R3hdm1	100	94.561	Mus_spretus
ENSFCAG00000027113	R3HDM1	100	98.456	ENSMPUG00000002412	R3HDM1	100	98.456	Mustela_putorius_furo
ENSFCAG00000027113	R3HDM1	100	95.298	ENSMLUG00000013824	R3HDM1	100	95.118	Myotis_lucifugus
ENSFCAG00000027113	R3HDM1	100	94.651	ENSNLEG00000008622	R3HDM1	100	97.238	Nomascus_leucogenys
ENSFCAG00000027113	R3HDM1	89	73.824	ENSMEUG00000011784	R3HDM1	99	73.722	Notamacropus_eugenii
ENSFCAG00000027113	R3HDM1	100	92.084	ENSODEG00000008607	R3HDM1	100	95.267	Octodon_degus
ENSFCAG00000027113	R3HDM1	96	47.928	ENSONIG00000012017	r3hdm1	93	66.185	Oreochromis_niloticus
ENSFCAG00000027113	R3HDM1	100	82.534	ENSOANG00000007987	R3HDM1	100	82.353	Ornithorhynchus_anatinus
ENSFCAG00000027113	R3HDM1	89	93.992	ENSOCUG00000017366	R3HDM1	98	93.788	Oryctolagus_cuniculus
ENSFCAG00000027113	R3HDM1	88	59.905	ENSORLG00000004297	r3hdm1	86	67.419	Oryzias_latipes
ENSFCAG00000027113	R3HDM1	88	60.143	ENSORLG00015017355	r3hdm1	85	67.742	Oryzias_latipes_hsok
ENSFCAG00000027113	R3HDM1	100	94.273	ENSOGAG00000003136	R3HDM1	100	94.273	Otolemur_garnettii
ENSFCAG00000027113	R3HDM1	100	95.905	ENSOARG00000010788	R3HDM1	100	95.905	Ovis_aries
ENSFCAG00000027113	R3HDM1	100	94.751	ENSPPAG00000027858	R3HDM1	100	97.790	Pan_paniscus
ENSFCAG00000027113	R3HDM1	100	99.727	ENSPPRG00000002626	R3HDM1	100	99.727	Panthera_pardus
ENSFCAG00000027113	R3HDM1	100	99.727	ENSPTIG00000016581	R3HDM1	100	100.000	Panthera_tigris_altaica
ENSFCAG00000027113	R3HDM1	100	94.661	ENSPTRG00000012494	R3HDM1	100	97.790	Pan_troglodytes
ENSFCAG00000027113	R3HDM1	100	94.742	ENSPANG00000026448	R3HDM1	100	97.790	Papio_anubis
ENSFCAG00000027113	R3HDM1	91	76.190	ENSPKIG00000004328	r3hdm1	91	76.508	Paramormyrops_kingsleyae
ENSFCAG00000027113	R3HDM1	100	78.947	ENSPSIG00000012915	R3HDM1	100	78.857	Pelodiscus_sinensis
ENSFCAG00000027113	R3HDM1	100	95.320	ENSPEMG00000015187	R3hdm1	100	93.827	Peromyscus_maniculatus_bairdii
ENSFCAG00000027113	R3HDM1	87	59.140	ENSPMAG00000003369	-	98	43.222	Petromyzon_marinus
ENSFCAG00000027113	R3HDM1	100	85.439	ENSPCIG00000002491	R3HDM1	100	91.176	Phascolarctos_cinereus
ENSFCAG00000027113	R3HDM1	88	59.145	ENSPFOG00000015036	r3hdm1	94	58.195	Poecilia_formosa
ENSFCAG00000027113	R3HDM1	88	48.189	ENSPLAG00000018042	r3hdm1	86	65.732	Poecilia_latipinna
ENSFCAG00000027113	R3HDM1	88	48.439	ENSPMEG00000023947	r3hdm1	86	65.732	Poecilia_mexicana
ENSFCAG00000027113	R3HDM1	88	59.716	ENSPREG00000007902	r3hdm1	86	66.770	Poecilia_reticulata
ENSFCAG00000027113	R3HDM1	100	93.931	ENSPPYG00000012815	R3HDM1	100	93.841	Pongo_abelii
ENSFCAG00000027113	R3HDM1	98	94.225	ENSPCAG00000006208	R3HDM1	93	93.396	Procavia_capensis
ENSFCAG00000027113	R3HDM1	100	92.217	ENSPCOG00000012698	R3HDM1	100	92.997	Propithecus_coquereli
ENSFCAG00000027113	R3HDM1	100	92.365	ENSPVAG00000006098	R3HDM1	100	87.149	Pteropus_vampyrus
ENSFCAG00000027113	R3HDM1	88	76.603	ENSPNAG00000005436	R3HDM1	99	77.133	Pygocentrus_nattereri
ENSFCAG00000027113	R3HDM1	53	58.400	ENSPNAG00000004162	arpp21	57	58.400	Pygocentrus_nattereri
ENSFCAG00000027113	R3HDM1	91	72.981	ENSPNAG00000013952	r3hdm1	89	74.603	Pygocentrus_nattereri
ENSFCAG00000027113	R3HDM1	100	94.581	ENSRNOG00000004099	R3hdm1	100	90.653	Rattus_norvegicus
ENSFCAG00000027113	R3HDM1	100	93.756	ENSRBIG00000033317	R3HDM1	100	98.893	Rhinopithecus_bieti
ENSFCAG00000027113	R3HDM1	100	94.475	ENSRROG00000034534	R3HDM1	100	97.514	Rhinopithecus_roxellana
ENSFCAG00000027113	R3HDM1	100	94.742	ENSSBOG00000020389	R3HDM1	100	96.409	Saimiri_boliviensis_boliviensis
ENSFCAG00000027113	R3HDM1	100	85.649	ENSSHAG00000016999	R3HDM1	100	85.559	Sarcophilus_harrisii
ENSFCAG00000027113	R3HDM1	100	56.812	ENSSFOG00015019851	-	96	63.221	Scleropages_formosus
ENSFCAG00000027113	R3HDM1	100	70.874	ENSSFOG00015014134	r3hdm1	100	70.874	Scleropages_formosus
ENSFCAG00000027113	R3HDM1	99	44.751	ENSSMAG00000001669	r3hdm1	99	44.614	Scophthalmus_maximus
ENSFCAG00000027113	R3HDM1	89	47.669	ENSSDUG00000010749	r3hdm1	99	48.255	Seriola_dumerili
ENSFCAG00000027113	R3HDM1	99	47.405	ENSSLDG00000004499	r3hdm1	99	47.524	Seriola_lalandi_dorsalis
ENSFCAG00000027113	R3HDM1	73	84.385	ENSSARG00000000352	-	69	84.385	Sorex_araneus
ENSFCAG00000027113	R3HDM1	100	80.870	ENSSPUG00000004167	R3HDM1	100	80.598	Sphenodon_punctatus
ENSFCAG00000027113	R3HDM1	88	62.053	ENSSPAG00000004648	r3hdm1	91	61.337	Stegastes_partitus
ENSFCAG00000027113	R3HDM1	100	99.015	ENSSSCG00000015692	R3HDM1	100	97.094	Sus_scrofa
ENSFCAG00000027113	R3HDM1	100	74.051	ENSTGUG00000011750	R3HDM1	100	74.141	Taeniopygia_guttata
ENSFCAG00000027113	R3HDM1	78	67.208	ENSTRUG00000011654	r3hdm1	84	67.208	Takifugu_rubripes
ENSFCAG00000027113	R3HDM1	84	47.265	ENSTNIG00000010362	r3hdm1	95	47.190	Tetraodon_nigroviridis
ENSFCAG00000027113	R3HDM1	100	89.536	ENSTTRG00000003935	R3HDM1	100	89.536	Tursiops_truncatus
ENSFCAG00000027113	R3HDM1	70	98.710	ENSUAMG00000024806	R3HDM1	99	97.048	Ursus_americanus
ENSFCAG00000027113	R3HDM1	100	97.729	ENSUMAG00000005552	R3HDM1	100	99.724	Ursus_maritimus
ENSFCAG00000027113	R3HDM1	97	98.246	ENSVPAG00000007333	R3HDM1	93	98.246	Vicugna_pacos
ENSFCAG00000027113	R3HDM1	100	98.680	ENSVVUG00000006457	R3HDM1	100	98.680	Vulpes_vulpes
ENSFCAG00000027113	R3HDM1	89	67.980	ENSXETG00000019330	r3hdm1	100	67.677	Xenopus_tropicalis
ENSFCAG00000027113	R3HDM1	71	50.769	ENSXCOG00000017448	r3hdm1	94	49.936	Xiphophorus_couchianus
ENSFCAG00000027113	R3HDM1	88	60.859	ENSXMAG00000007885	r3hdm1	82	67.961	Xiphophorus_maculatus