EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000028358 (Gene tree)
Gene ID: 101100852
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 95307 bases
Position: chrE1:59385624-59480930
Accession: 101100852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000024914	Ago_hook	PF10427.9	1.6e-20	1	1
ENSFCAP00000012064	Ago_hook	PF10427.9	1.8e-20	1	1
ENSFCAP00000024914	RRM_1	PF00076.22	0.00016	1	1
ENSFCAP00000012064	RRM_1	PF00076.22	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000027976	TNRC6C-202	5070	XM_019818326	ENSFCAP00000024914	1689 (aa)	XP_019673885	M3XE58
ENSFCAT00000013010	TNRC6C-201	5832	XM_023244125	ENSFCAP00000012064	1943 (aa)	XP_023099893	M3WI13

Gene Model

Click here to download ENSFCAG00000028358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000028358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000028358	TNRC6C	99	37.794	ENSFCAG00000004791	TNRC6B	99	38.204
ENSFCAG00000028358	TNRC6C	99	43.476	ENSFCAG00000025236	TNRC6A	99	42.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000028358	TNRC6C	100	89.315	ENSG00000078687	TNRC6C	100	89.374	Homo_sapiens
ENSFCAG00000028358	TNRC6C	80	54.760	ENSAPOG00000019749	tnrc6c1	98	48.679	Acanthochromis_polyacanthus
ENSFCAG00000028358	TNRC6C	100	88.889	ENSAMEG00000013756	TNRC6C	100	90.615	Ailuropoda_melanoleuca
ENSFCAG00000028358	TNRC6C	90	51.783	ENSACIG00000008075	tnrc6c1	92	51.374	Amphilophus_citrinellus
ENSFCAG00000028358	TNRC6C	78	66.826	ENSAOCG00000023968	tnrc6c1	99	45.285	Amphiprion_ocellaris
ENSFCAG00000028358	TNRC6C	80	53.456	ENSAPEG00000009020	tnrc6c1	99	48.017	Amphiprion_percula
ENSFCAG00000028358	TNRC6C	99	83.678	ENSAPLG00000005456	TNRC6C	100	83.626	Anas_platyrhynchos
ENSFCAG00000028358	TNRC6C	100	82.785	ENSACAG00000016198	TNRC6C	98	83.750	Anolis_carolinensis
ENSFCAG00000028358	TNRC6C	100	88.777	ENSANAG00000021554	TNRC6C	100	88.777	Aotus_nancymaae
ENSFCAG00000028358	TNRC6C	100	47.971	ENSACLG00000000424	tnrc6c1	99	51.719	Astatotilapia_calliptera
ENSFCAG00000028358	TNRC6C	100	88.423	ENSBTAG00000018658	TNRC6C	100	88.955	Bos_taurus
ENSFCAG00000028358	TNRC6C	100	88.895	ENSCJAG00000019431	TNRC6C	100	88.955	Callithrix_jacchus
ENSFCAG00000028358	TNRC6C	99	93.125	ENSCAFG00000005224	TNRC6C	99	92.865	Canis_familiaris
ENSFCAG00000028358	TNRC6C	100	93.577	ENSCAFG00020006661	TNRC6C	100	92.836	Canis_lupus_dingo
ENSFCAG00000028358	TNRC6C	100	88.698	ENSCHIG00000026004	TNRC6C	100	87.294	Capra_hircus
ENSFCAG00000028358	TNRC6C	100	88.042	ENSTSYG00000005403	TNRC6C	100	89.689	Carlito_syrichta
ENSFCAG00000028358	TNRC6C	100	82.000	ENSCAPG00000007307	TNRC6C	99	80.544	Cavia_aperea
ENSFCAG00000028358	TNRC6C	100	87.352	ENSCPOG00000000467	TNRC6C	100	85.330	Cavia_porcellus
ENSFCAG00000028358	TNRC6C	100	89.309	ENSCCAG00000030524	TNRC6C	100	89.368	Cebus_capucinus
ENSFCAG00000028358	TNRC6C	100	89.250	ENSCATG00000033135	TNRC6C	100	89.309	Cercocebus_atys
ENSFCAG00000028358	TNRC6C	100	89.184	ENSCLAG00000011139	TNRC6C	99	85.959	Chinchilla_lanigera
ENSFCAG00000028358	TNRC6C	99	88.098	ENSCSAG00000005167	TNRC6C	99	88.150	Chlorocebus_sabaeus
ENSFCAG00000028358	TNRC6C	71	88.818	ENSCHOG00000000088	TNRC6C	75	83.193	Choloepus_hoffmanni
ENSFCAG00000028358	TNRC6C	100	85.985	ENSCPBG00000027960	TNRC6C	100	85.985	Chrysemys_picta_bellii
ENSFCAG00000028358	TNRC6C	100	88.895	ENSCANG00000041771	TNRC6C	100	88.955	Colobus_angolensis_palliatus
ENSFCAG00000028358	TNRC6C	100	87.125	ENSCGRG00001022686	Tnrc6c	100	85.714	Cricetulus_griseus_chok1gshd
ENSFCAG00000028358	TNRC6C	100	87.537	ENSCGRG00000018041	Tnrc6c	100	85.714	Cricetulus_griseus_crigri
ENSFCAG00000028358	TNRC6C	100	47.816	ENSCSEG00000012744	tnrc6c1	99	43.123	Cynoglossus_semilaevis
ENSFCAG00000028358	TNRC6C	99	50.735	ENSDARG00000076847	tnrc6c1	96	54.303	Danio_rerio
ENSFCAG00000028358	TNRC6C	100	86.532	ENSDNOG00000003247	TNRC6C	99	85.952	Dasypus_novemcinctus
ENSFCAG00000028358	TNRC6C	100	84.529	ENSDORG00000004558	Tnrc6c	100	84.118	Dipodomys_ordii
ENSFCAG00000028358	TNRC6C	90	81.043	ENSETEG00000005527	TNRC6C	86	81.426	Echinops_telfairi
ENSFCAG00000028358	TNRC6C	100	90.710	ENSEASG00005004799	TNRC6C	100	90.710	Equus_asinus_asinus
ENSFCAG00000028358	TNRC6C	100	90.710	ENSECAG00000012486	TNRC6C	99	89.405	Equus_caballus
ENSFCAG00000028358	TNRC6C	96	87.800	ENSEEUG00000010008	TNRC6C	96	88.156	Erinaceus_europaeus
ENSFCAG00000028358	TNRC6C	100	82.117	ENSFALG00000000848	TNRC6C	100	83.916	Ficedula_albicollis
ENSFCAG00000028358	TNRC6C	100	88.948	ENSFDAG00000010368	TNRC6C	100	85.890	Fukomys_damarensis
ENSFCAG00000028358	TNRC6C	100	46.957	ENSFHEG00000002936	tnrc6c1	99	45.788	Fundulus_heteroclitus
ENSFCAG00000028358	TNRC6C	100	86.339	ENSGALG00000001725	TNRC6C	100	86.517	Gallus_gallus
ENSFCAG00000028358	TNRC6C	100	48.535	ENSGAFG00000019019	tnrc6c1	100	48.475	Gambusia_affinis
ENSFCAG00000028358	TNRC6C	80	53.348	ENSGACG00000012320	tnrc6c1	99	47.053	Gasterosteus_aculeatus
ENSFCAG00000028358	TNRC6C	100	85.638	ENSGAGG00000022043	TNRC6C	99	85.044	Gopherus_agassizii
ENSFCAG00000028358	TNRC6C	100	88.548	ENSGGOG00000011304	TNRC6C	100	88.548	Gorilla_gorilla
ENSFCAG00000028358	TNRC6C	100	47.931	ENSHBUG00000010846	tnrc6c1	99	51.869	Haplochromis_burtoni
ENSFCAG00000028358	TNRC6C	100	88.712	ENSHGLG00000004809	TNRC6C	99	85.551	Heterocephalus_glaber_female
ENSFCAG00000028358	TNRC6C	100	87.824	ENSHGLG00100012597	TNRC6C	99	85.655	Heterocephalus_glaber_male
ENSFCAG00000028358	TNRC6C	99	50.887	ENSIPUG00000000818	tnrc6c1	72	60.491	Ictalurus_punctatus
ENSFCAG00000028358	TNRC6C	100	87.367	ENSSTOG00000009101	TNRC6C	100	84.955	Ictidomys_tridecemlineatus
ENSFCAG00000028358	TNRC6C	100	86.126	ENSJJAG00000017055	Tnrc6c	99	83.645	Jaculus_jaculus
ENSFCAG00000028358	TNRC6C	100	49.106	ENSKMAG00000021023	tnrc6c1	97	50.119	Kryptolebias_marmoratus
ENSFCAG00000028358	TNRC6C	100	73.857	ENSLACG00000015283	TNRC6C	100	72.404	Latimeria_chalumnae
ENSFCAG00000028358	TNRC6C	99	56.796	ENSLOCG00000013377	tnrc6c1	99	55.317	Lepisosteus_oculatus
ENSFCAG00000028358	TNRC6C	100	88.693	ENSLAFG00000011122	TNRC6C	99	86.413	Loxodonta_africana
ENSFCAG00000028358	TNRC6C	100	89.191	ENSMFAG00000043943	TNRC6C	100	89.250	Macaca_fascicularis
ENSFCAG00000028358	TNRC6C	100	89.191	ENSMMUG00000011924	TNRC6C	100	89.250	Macaca_mulatta
ENSFCAG00000028358	TNRC6C	100	89.191	ENSMNEG00000030405	TNRC6C	100	89.250	Macaca_nemestrina
ENSFCAG00000028358	TNRC6C	100	89.250	ENSMLEG00000033436	TNRC6C	100	89.309	Mandrillus_leucophaeus
ENSFCAG00000028358	TNRC6C	94	52.080	ENSMAMG00000023613	tnrc6c1	97	50.600	Mastacembelus_armatus
ENSFCAG00000028358	TNRC6C	100	47.971	ENSMZEG00005010920	tnrc6c1	99	51.719	Maylandia_zebra
ENSFCAG00000028358	TNRC6C	99	77.543	ENSMGAG00000003906	TNRC6C	100	77.468	Meleagris_gallopavo
ENSFCAG00000028358	TNRC6C	100	86.596	ENSMAUG00000021618	Tnrc6c	100	86.772	Mesocricetus_auratus
ENSFCAG00000028358	TNRC6C	100	89.841	ENSMICG00000003952	TNRC6C	100	89.663	Microcebus_murinus
ENSFCAG00000028358	TNRC6C	100	88.423	ENSMOCG00000015879	Tnrc6c	100	85.618	Microtus_ochrogaster
ENSFCAG00000028358	TNRC6C	79	54.304	ENSMMOG00000005203	tnrc6c1	100	49.295	Mola_mola
ENSFCAG00000028358	TNRC6C	100	84.254	ENSMODG00000001785	TNRC6C	99	81.662	Monodelphis_domestica
ENSFCAG00000028358	TNRC6C	100	88.305	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	85.506	Mus_caroli
ENSFCAG00000028358	TNRC6C	100	87.773	ENSMUSG00000025571	Tnrc6c	100	85.003	Mus_musculus
ENSFCAG00000028358	TNRC6C	100	88.187	MGP_PahariEiJ_G0018593	Tnrc6c	100	85.395	Mus_pahari
ENSFCAG00000028358	TNRC6C	100	87.832	MGP_SPRETEiJ_G0018309	Tnrc6c	100	85.059	Mus_spretus
ENSFCAG00000028358	TNRC6C	99	90.531	ENSMPUG00000013348	TNRC6C	98	90.417	Mustela_putorius_furo
ENSFCAG00000028358	TNRC6C	100	83.008	ENSMLUG00000014431	TNRC6C	98	82.099	Myotis_lucifugus
ENSFCAG00000028358	TNRC6C	100	87.471	ENSNGAG00000012203	Tnrc6c	99	85.283	Nannospalax_galili
ENSFCAG00000028358	TNRC6C	100	48.412	ENSNBRG00000005344	tnrc6c1	99	52.621	Neolamprologus_brichardi
ENSFCAG00000028358	TNRC6C	98	86.594	ENSNLEG00000000047	TNRC6C	99	86.489	Nomascus_leucogenys
ENSFCAG00000028358	TNRC6C	97	78.571	ENSMEUG00000005104	TNRC6C	99	86.979	Notamacropus_eugenii
ENSFCAG00000028358	TNRC6C	100	88.593	ENSODEG00000012499	TNRC6C	100	88.771	Octodon_degus
ENSFCAG00000028358	TNRC6C	100	50.057	ENSONIG00000002210	tnrc6c1	96	50.646	Oreochromis_niloticus
ENSFCAG00000028358	TNRC6C	99	63.839	ENSOANG00000009758	-	100	60.874	Ornithorhynchus_anatinus
ENSFCAG00000028358	TNRC6C	85	79.020	ENSOCUG00000006122	TNRC6C	95	75.198	Oryctolagus_cuniculus
ENSFCAG00000028358	TNRC6C	100	48.255	ENSORLG00000009837	tnrc6c1	100	66.914	Oryzias_latipes
ENSFCAG00000028358	TNRC6C	100	48.282	ENSORLG00020016510	tnrc6c1	100	48.339	Oryzias_latipes_hni
ENSFCAG00000028358	TNRC6C	81	43.379	ENSORLG00015000171	tnrc6c1	98	43.595	Oryzias_latipes_hsok
ENSFCAG00000028358	TNRC6C	91	49.847	ENSOMEG00000000357	tnrc6c1	99	44.324	Oryzias_melastigma
ENSFCAG00000028358	TNRC6C	100	86.135	ENSOGAG00000007197	TNRC6C	100	87.903	Otolemur_garnettii
ENSFCAG00000028358	TNRC6C	95	84.949	ENSOARG00000006041	TNRC6C	98	85.111	Ovis_aries
ENSFCAG00000028358	TNRC6C	100	89.250	ENSPPAG00000027160	TNRC6C	100	89.309	Pan_paniscus
ENSFCAG00000028358	TNRC6C	100	99.485	ENSPPRG00000018881	TNRC6C	100	99.485	Panthera_pardus
ENSFCAG00000028358	TNRC6C	90	92.576	ENSPTIG00000008791	TNRC6C	70	82.572	Panthera_tigris_altaica
ENSFCAG00000028358	TNRC6C	100	89.368	ENSPTRG00000009699	TNRC6C	100	89.427	Pan_troglodytes
ENSFCAG00000028358	TNRC6C	100	89.073	ENSPANG00000019994	TNRC6C	100	89.132	Papio_anubis
ENSFCAG00000028358	TNRC6C	96	52.266	ENSPKIG00000005428	tnrc6c1	98	51.188	Paramormyrops_kingsleyae
ENSFCAG00000028358	TNRC6C	100	83.619	ENSPSIG00000018069	TNRC6C	100	81.544	Pelodiscus_sinensis
ENSFCAG00000028358	TNRC6C	65	53.978	ENSPMGG00000022911	tnrc6c1	97	61.224	Periophthalmus_magnuspinnatus
ENSFCAG00000028358	TNRC6C	100	87.654	ENSPEMG00000009785	Tnrc6c	100	85.009	Peromyscus_maniculatus_bairdii
ENSFCAG00000028358	TNRC6C	58	82.431	ENSPCIG00000017421	-	99	82.275	Phascolarctos_cinereus
ENSFCAG00000028358	TNRC6C	100	48.339	ENSPFOG00000012560	tnrc6c1	97	52.888	Poecilia_formosa
ENSFCAG00000028358	TNRC6C	100	48.394	ENSPLAG00000021055	tnrc6c1	100	49.021	Poecilia_latipinna
ENSFCAG00000028358	TNRC6C	99	88.629	ENSPPYG00000008679	TNRC6C	98	88.669	Pongo_abelii
ENSFCAG00000028358	TNRC6C	93	93.365	ENSPCAG00000012510	TNRC6C	91	93.365	Procavia_capensis
ENSFCAG00000028358	TNRC6C	100	90.490	ENSPCOG00000021451	TNRC6C	100	90.431	Propithecus_coquereli
ENSFCAG00000028358	TNRC6C	96	92.373	ENSPVAG00000002008	TNRC6C	95	92.373	Pteropus_vampyrus
ENSFCAG00000028358	TNRC6C	100	47.632	ENSPNYG00000014477	tnrc6c1	99	51.284	Pundamilia_nyererei
ENSFCAG00000028358	TNRC6C	100	87.847	ENSRNOG00000022395	Tnrc6c	100	87.729	Rattus_norvegicus
ENSFCAG00000028358	TNRC6C	100	89.014	ENSRBIG00000027777	TNRC6C	100	89.073	Rhinopithecus_bieti
ENSFCAG00000028358	TNRC6C	100	89.073	ENSRROG00000042912	TNRC6C	100	89.132	Rhinopithecus_roxellana
ENSFCAG00000028358	TNRC6C	99	88.410	ENSSBOG00000023981	TNRC6C	100	88.428	Saimiri_boliviensis_boliviensis
ENSFCAG00000028358	TNRC6C	52	85.265	ENSSHAG00000018330	-	100	87.111	Sarcophilus_harrisii
ENSFCAG00000028358	TNRC6C	80	56.243	ENSSFOG00015004735	-	99	60.574	Scleropages_formosus
ENSFCAG00000028358	TNRC6C	92	56.895	ENSSFOG00015006475	tnrc6c1	99	50.643	Scleropages_formosus
ENSFCAG00000028358	TNRC6C	100	48.226	ENSSMAG00000012761	tnrc6c1	99	49.740	Scophthalmus_maximus
ENSFCAG00000028358	TNRC6C	100	50.458	ENSSDUG00000002366	tnrc6c1	99	48.733	Seriola_dumerili
ENSFCAG00000028358	TNRC6C	100	48.670	ENSSLDG00000025613	tnrc6c1	97	50.086	Seriola_lalandi_dorsalis
ENSFCAG00000028358	TNRC6C	91	91.810	ENSSARG00000006816	TNRC6C	91	90.756	Sorex_araneus
ENSFCAG00000028358	TNRC6C	82	82.064	ENSSPUG00000007341	TNRC6C	98	84.941	Sphenodon_punctatus
ENSFCAG00000028358	TNRC6C	78	52.687	ENSSPAG00000014977	tnrc6c1	98	45.431	Stegastes_partitus
ENSFCAG00000028358	TNRC6C	100	86.399	ENSSSCG00000034373	TNRC6C	100	91.707	Sus_scrofa
ENSFCAG00000028358	TNRC6C	100	86.288	ENSTGUG00000007733	TNRC6C	100	83.678	Taeniopygia_guttata
ENSFCAG00000028358	TNRC6C	80	52.285	ENSTRUG00000011685	tnrc6c1	97	48.984	Takifugu_rubripes
ENSFCAG00000028358	TNRC6C	94	54.401	ENSTNIG00000005273	tnrc6c1	100	60.447	Tetraodon_nigroviridis
ENSFCAG00000028358	TNRC6C	64	89.844	ENSTBEG00000005046	TNRC6C	95	89.844	Tupaia_belangeri
ENSFCAG00000028358	TNRC6C	100	90.479	ENSTTRG00000010828	TNRC6C	97	90.479	Tursiops_truncatus
ENSFCAG00000028358	TNRC6C	100	90.995	ENSUMAG00000013614	TNRC6C	99	91.202	Ursus_maritimus
ENSFCAG00000028358	TNRC6C	52	83.657	ENSVPAG00000006765	-	100	83.657	Vicugna_pacos
ENSFCAG00000028358	TNRC6C	100	94.257	ENSVVUG00000015268	TNRC6C	100	94.257	Vulpes_vulpes
ENSFCAG00000028358	TNRC6C	100	73.533	ENSXETG00000019470	tnrc6c	100	73.314	Xenopus_tropicalis
ENSFCAG00000028358	TNRC6C	100	50.000	ENSXMAG00000025971	tnrc6c1	100	48.337	Xiphophorus_maculatus