EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000029116 (Gene tree)
Gene ID: 101096159
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 85956 bases
Position: chrC1:77714729-77800684
Accession: 101096159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000016448	ResIII	PF04851.15	3.8e-11	1	1
ENSFCAP00000016448	DEAD	PF00270.29	5.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000022690	HFM1-201	4320	XM_006934913	ENSFCAP00000016448	1439 (aa)	XP_006934975	M3WQ18

Gene Model

Click here to download ENSFCAG00000029116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000029116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000029116	HFM1	51	35.725	ENSFCAG00000031266	ASCC3	61	35.725
ENSFCAG00000029116	HFM1	58	31.303	ENSFCAG00000010699	SNRNP200	75	31.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000029116	HFM1	100	86.319	ENSG00000162669	HFM1	100	86.319	Homo_sapiens
ENSFCAG00000029116	HFM1	58	65.758	ENSAPOG00000005304	hfm1	95	65.758	Acanthochromis_polyacanthus
ENSFCAG00000029116	HFM1	100	91.944	ENSAMEG00000000432	HFM1	100	91.944	Ailuropoda_melanoleuca
ENSFCAG00000029116	HFM1	73	58.955	ENSACIG00000021553	hfm1	95	58.955	Amphilophus_citrinellus
ENSFCAG00000029116	HFM1	58	66.033	ENSAOCG00000022839	hfm1	96	68.852	Amphiprion_ocellaris
ENSFCAG00000029116	HFM1	55	69.027	ENSAPEG00000014316	hfm1	96	69.027	Amphiprion_percula
ENSFCAG00000029116	HFM1	66	64.463	ENSATEG00000019181	hfm1	80	63.716	Anabas_testudineus
ENSFCAG00000029116	HFM1	100	60.971	ENSAPLG00000013639	HFM1	100	60.971	Anas_platyrhynchos
ENSFCAG00000029116	HFM1	100	82.802	ENSANAG00000029513	HFM1	100	82.802	Aotus_nancymaae
ENSFCAG00000029116	HFM1	69	59.647	ENSACLG00000009033	hfm1	96	64.988	Astatotilapia_calliptera
ENSFCAG00000029116	HFM1	85	55.047	ENSAMXG00000006108	hfm1	83	54.968	Astyanax_mexicanus
ENSFCAG00000029116	HFM1	100	87.222	ENSBTAG00000020856	HFM1	100	87.222	Bos_taurus
ENSFCAG00000029116	HFM1	100	84.583	ENSCJAG00000001843	HFM1	100	84.583	Callithrix_jacchus
ENSFCAG00000029116	HFM1	100	91.319	ENSCAFG00000020187	HFM1	100	91.319	Canis_familiaris
ENSFCAG00000029116	HFM1	100	84.258	ENSTSYG00000014250	HFM1	100	84.258	Carlito_syrichta
ENSFCAG00000029116	HFM1	99	79.778	ENSCPOG00000007421	HFM1	99	79.778	Cavia_porcellus
ENSFCAG00000029116	HFM1	100	84.444	ENSCCAG00000033206	HFM1	100	84.444	Cebus_capucinus
ENSFCAG00000029116	HFM1	100	85.556	ENSCATG00000030987	HFM1	100	85.556	Cercocebus_atys
ENSFCAG00000029116	HFM1	100	80.660	ENSCLAG00000005173	HFM1	99	80.660	Chinchilla_lanigera
ENSFCAG00000029116	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSFCAG00000029116	HFM1	100	73.481	ENSCGRG00001016995	Hfm1	100	73.481	Cricetulus_griseus_chok1gshd
ENSFCAG00000029116	HFM1	100	77.708	ENSCGRG00000017181	Hfm1	100	77.708	Cricetulus_griseus_crigri
ENSFCAG00000029116	HFM1	71	60.038	ENSCSEG00000017659	hfm1	94	60.038	Cynoglossus_semilaevis
ENSFCAG00000029116	HFM1	76	56.014	ENSDARG00000104288	hfm1	96	56.014	Danio_rerio
ENSFCAG00000029116	HFM1	100	80.728	ENSDNOG00000004776	HFM1	100	80.728	Dasypus_novemcinctus
ENSFCAG00000029116	HFM1	100	77.709	ENSDORG00000014661	Hfm1	100	77.709	Dipodomys_ordii
ENSFCAG00000029116	HFM1	71	86.863	ENSEASG00005015424	HFM1	98	86.863	Equus_asinus_asinus
ENSFCAG00000029116	HFM1	100	86.599	ENSECAG00000024039	HFM1	100	86.599	Equus_caballus
ENSFCAG00000029116	HFM1	63	67.728	ENSELUG00000018944	hfm1	98	67.728	Esox_lucius
ENSFCAG00000029116	HFM1	100	59.932	ENSFALG00000001781	HFM1	100	60.408	Ficedula_albicollis
ENSFCAG00000029116	HFM1	100	79.276	ENSFDAG00000020816	HFM1	100	79.276	Fukomys_damarensis
ENSFCAG00000029116	HFM1	66	61.065	ENSGMOG00000017436	hfm1	99	61.065	Gadus_morhua
ENSFCAG00000029116	HFM1	71	61.932	ENSGAFG00000018093	hfm1	92	67.558	Gambusia_affinis
ENSFCAG00000029116	HFM1	66	61.515	ENSGACG00000015686	hfm1	100	61.515	Gasterosteus_aculeatus
ENSFCAG00000029116	HFM1	100	86.181	ENSGGOG00000038524	HFM1	100	86.181	Gorilla_gorilla
ENSFCAG00000029116	HFM1	69	60.627	ENSHBUG00000007309	hfm1	95	60.405	Haplochromis_burtoni
ENSFCAG00000029116	HFM1	56	64.461	ENSHCOG00000019632	hfm1	97	64.461	Hippocampus_comes
ENSFCAG00000029116	HFM1	65	65.236	ENSIPUG00000017020	hfm1	92	65.714	Ictalurus_punctatus
ENSFCAG00000029116	HFM1	100	77.569	ENSJJAG00000017198	Hfm1	100	77.569	Jaculus_jaculus
ENSFCAG00000029116	HFM1	62	62.708	ENSKMAG00000002282	hfm1	90	62.708	Kryptolebias_marmoratus
ENSFCAG00000029116	HFM1	71	60.059	ENSLBEG00000006759	hfm1	96	65.711	Labrus_bergylta
ENSFCAG00000029116	HFM1	71	67.198	ENSLACG00000010698	HFM1	100	67.291	Latimeria_chalumnae
ENSFCAG00000029116	HFM1	74	63.678	ENSLOCG00000004931	hfm1	99	63.771	Lepisosteus_oculatus
ENSFCAG00000029116	HFM1	52	90.040	ENSLAFG00000015903	-	99	90.040	Loxodonta_africana
ENSFCAG00000029116	HFM1	100	82.606	ENSMFAG00000003649	HFM1	100	82.606	Macaca_fascicularis
ENSFCAG00000029116	HFM1	100	85.069	ENSMMUG00000006819	HFM1	100	85.069	Macaca_mulatta
ENSFCAG00000029116	HFM1	54	69.448	ENSMAMG00000004623	hfm1	97	65.942	Mastacembelus_armatus
ENSFCAG00000029116	HFM1	69	59.647	ENSMZEG00005004679	hfm1	96	64.988	Maylandia_zebra
ENSFCAG00000029116	HFM1	54	78.217	ENSMGAG00000008437	HFM1	98	78.217	Meleagris_gallopavo
ENSFCAG00000029116	HFM1	100	77.462	ENSMAUG00000018858	Hfm1	100	77.462	Mesocricetus_auratus
ENSFCAG00000029116	HFM1	100	84.941	ENSMICG00000037935	HFM1	100	84.941	Microcebus_murinus
ENSFCAG00000029116	HFM1	100	75.972	ENSMOCG00000014812	Hfm1	100	75.972	Microtus_ochrogaster
ENSFCAG00000029116	HFM1	62	63.749	ENSMMOG00000006148	hfm1	96	63.921	Mola_mola
ENSFCAG00000029116	HFM1	69	60.753	ENSMALG00000002401	hfm1	94	66.546	Monopterus_albus
ENSFCAG00000029116	HFM1	95	72.781	MGP_CAROLIEiJ_G0027496	Hfm1	100	72.781	Mus_caroli
ENSFCAG00000029116	HFM1	100	76.667	ENSMUSG00000043410	Hfm1	100	76.667	Mus_musculus
ENSFCAG00000029116	HFM1	100	76.319	MGP_PahariEiJ_G0017268	Hfm1	100	76.319	Mus_pahari
ENSFCAG00000029116	HFM1	100	76.528	MGP_SPRETEiJ_G0028495	Hfm1	100	76.528	Mus_spretus
ENSFCAG00000029116	HFM1	100	87.811	ENSMPUG00000004594	HFM1	100	87.811	Mustela_putorius_furo
ENSFCAG00000029116	HFM1	100	84.397	ENSMLUG00000010200	HFM1	100	84.397	Myotis_lucifugus
ENSFCAG00000029116	HFM1	69	57.045	ENSNBRG00000002910	hfm1	97	65.212	Neolamprologus_brichardi
ENSFCAG00000029116	HFM1	100	82.178	ENSNLEG00000010285	HFM1	100	82.178	Nomascus_leucogenys
ENSFCAG00000029116	HFM1	84	68.391	ENSMEUG00000015788	HFM1	84	68.391	Notamacropus_eugenii
ENSFCAG00000029116	HFM1	84	76.422	ENSOPRG00000013916	HFM1	84	76.422	Ochotona_princeps
ENSFCAG00000029116	HFM1	71	61.716	ENSONIG00000010590	hfm1	100	61.678	Oreochromis_niloticus
ENSFCAG00000029116	HFM1	56	65.560	ENSORLG00000026844	hfm1	99	65.560	Oryzias_latipes
ENSFCAG00000029116	HFM1	68	55.589	ENSORLG00020002951	hfm1	77	55.758	Oryzias_latipes_hni
ENSFCAG00000029116	HFM1	72	58.592	ENSOMEG00000016474	hfm1	90	51.531	Oryzias_melastigma
ENSFCAG00000029116	HFM1	85	87.368	ENSOGAG00000032369	HFM1	99	87.368	Otolemur_garnettii
ENSFCAG00000029116	HFM1	100	87.023	ENSOARG00000015812	HFM1	100	87.023	Ovis_aries
ENSFCAG00000029116	HFM1	92	87.717	ENSPPAG00000024582	HFM1	99	87.717	Pan_paniscus
ENSFCAG00000029116	HFM1	100	99.306	ENSPPRG00000003270	HFM1	100	99.306	Panthera_pardus
ENSFCAG00000029116	HFM1	100	99.167	ENSPTIG00000018881	HFM1	100	99.167	Panthera_tigris_altaica
ENSFCAG00000029116	HFM1	100	86.389	ENSPTRG00000000948	HFM1	100	86.389	Pan_troglodytes
ENSFCAG00000029116	HFM1	100	85.347	ENSPANG00000009838	HFM1	100	85.347	Papio_anubis
ENSFCAG00000029116	HFM1	73	61.064	ENSPKIG00000003810	hfm1	95	68.491	Paramormyrops_kingsleyae
ENSFCAG00000029116	HFM1	57	65.417	ENSPMGG00000011059	hfm1	100	65.417	Periophthalmus_magnuspinnatus
ENSFCAG00000029116	HFM1	100	78.681	ENSPEMG00000022852	Hfm1	100	78.681	Peromyscus_maniculatus_bairdii
ENSFCAG00000029116	HFM1	100	67.584	ENSPCIG00000014233	HFM1	100	67.584	Phascolarctos_cinereus
ENSFCAG00000029116	HFM1	71	62.464	ENSPFOG00000017194	hfm1	100	62.749	Poecilia_formosa
ENSFCAG00000029116	HFM1	71	63.523	ENSPLAG00000000571	hfm1	92	63.523	Poecilia_latipinna
ENSFCAG00000029116	HFM1	71	63.973	ENSPMEG00000019475	hfm1	93	63.973	Poecilia_mexicana
ENSFCAG00000029116	HFM1	71	63.369	ENSPREG00000007803	hfm1	92	67.153	Poecilia_reticulata
ENSFCAG00000029116	HFM1	100	86.042	ENSPPYG00000001163	HFM1	100	86.042	Pongo_abelii
ENSFCAG00000029116	HFM1	74	78.027	ENSPCAG00000004289	-	74	78.027	Procavia_capensis
ENSFCAG00000029116	HFM1	100	78.611	ENSPVAG00000009713	HFM1	100	78.611	Pteropus_vampyrus
ENSFCAG00000029116	HFM1	69	59.549	ENSPNYG00000001795	hfm1	96	64.988	Pundamilia_nyererei
ENSFCAG00000029116	HFM1	59	67.730	ENSPNAG00000010865	hfm1	84	67.730	Pygocentrus_nattereri
ENSFCAG00000029116	HFM1	100	75.486	ENSRNOG00000023299	Hfm1	100	75.486	Rattus_norvegicus
ENSFCAG00000029116	HFM1	100	85.347	ENSRROG00000045569	HFM1	100	85.347	Rhinopithecus_roxellana
ENSFCAG00000029116	HFM1	100	82.500	ENSSBOG00000027456	HFM1	100	82.500	Saimiri_boliviensis_boliviensis
ENSFCAG00000029116	HFM1	60	72.171	ENSSHAG00000014616	-	98	72.171	Sarcophilus_harrisii
ENSFCAG00000029116	HFM1	100	49.451	ENSSFOG00015020129	hfm1	100	49.258	Scleropages_formosus
ENSFCAG00000029116	HFM1	62	65.513	ENSSMAG00000006907	hfm1	88	64.699	Scophthalmus_maximus
ENSFCAG00000029116	HFM1	57	66.264	ENSSDUG00000011424	hfm1	93	66.264	Seriola_dumerili
ENSFCAG00000029116	HFM1	58	66.386	ENSSLDG00000016386	hfm1	92	66.386	Seriola_lalandi_dorsalis
ENSFCAG00000029116	HFM1	70	58.325	ENSSPAG00000001023	hfm1	96	65.930	Stegastes_partitus
ENSFCAG00000029116	HFM1	100	83.098	ENSSSCG00000006912	HFM1	99	84.667	Sus_scrofa
ENSFCAG00000029116	HFM1	66	76.803	ENSTGUG00000006172	HFM1	100	76.803	Taeniopygia_guttata
ENSFCAG00000029116	HFM1	100	83.206	ENSTTRG00000013933	HFM1	100	83.206	Tursiops_truncatus
ENSFCAG00000029116	HFM1	93	85.737	ENSVPAG00000011331	HFM1	93	85.737	Vicugna_pacos
ENSFCAG00000029116	HFM1	70	86.074	ENSVVUG00000020760	HFM1	99	86.074	Vulpes_vulpes
ENSFCAG00000029116	HFM1	58	66.627	ENSXMAG00000004178	hfm1	93	66.627	Xiphophorus_maculatus