EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000029742 (Gene tree)
Gene ID: 101101071
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 71886 bases
Position: chrC1:144473528-144545413
Accession: 101101071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000037306	Rif1_N	PF12231.8	2.7e-75	1	1
ENSFCAP00000016544	Rif1_N	PF12231.8	2.7e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000027124	RIF1-201	10470	XM_019838099	ENSFCAP00000016544	2479 (aa)	XP_019693658	M3WQB4
ENSFCAT00000049182	RIF1-202	10392	XM_023259319	ENSFCAP00000037306	2453 (aa)	XP_023115087	A0A2I2UY10

Gene Model

Click here to download ENSFCAG00000029742's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000029742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000029742	RIF1	100	79.396	ENSG00000080345	RIF1	97	89.903	Homo_sapiens
ENSFCAG00000029742	RIF1	99	88.593	ENSAMEG00000008461	RIF1	100	88.593	Ailuropoda_melanoleuca
ENSFCAG00000029742	RIF1	64	49.653	ENSACIG00000017765	rif1	70	49.576	Amphilophus_citrinellus
ENSFCAG00000029742	RIF1	65	47.694	ENSAOCG00000017231	rif1	66	47.615	Amphiprion_ocellaris
ENSFCAG00000029742	RIF1	64	54.293	ENSAPEG00000013228	rif1	67	54.293	Amphiprion_percula
ENSFCAG00000029742	RIF1	66	49.020	ENSATEG00000022887	rif1	73	47.634	Anabas_testudineus
ENSFCAG00000029742	RIF1	86	65.689	ENSAPLG00000007092	RIF1	95	65.689	Anas_platyrhynchos
ENSFCAG00000029742	RIF1	100	78.189	ENSANAG00000024840	RIF1	100	78.068	Aotus_nancymaae
ENSFCAG00000029742	RIF1	51	51.537	ENSAMXG00000010910	rif1	52	51.446	Astyanax_mexicanus
ENSFCAG00000029742	RIF1	94	82.060	ENSBTAG00000021020	RIF1	99	82.511	Bos_taurus
ENSFCAG00000029742	RIF1	100	77.787	ENSCJAG00000003138	RIF1	100	77.626	Callithrix_jacchus
ENSFCAG00000029742	RIF1	100	86.565	ENSCAFG00000005670	RIF1	97	86.565	Canis_familiaris
ENSFCAG00000029742	RIF1	100	85.548	ENSCAFG00020016401	RIF1	100	85.548	Canis_lupus_dingo
ENSFCAG00000029742	RIF1	100	81.844	ENSCHIG00000020327	RIF1	100	81.844	Capra_hircus
ENSFCAG00000029742	RIF1	99	76.861	ENSTSYG00000008861	RIF1	100	76.861	Carlito_syrichta
ENSFCAG00000029742	RIF1	79	73.611	ENSCAPG00000008957	RIF1	95	73.611	Cavia_aperea
ENSFCAG00000029742	RIF1	99	69.811	ENSCPOG00000037898	RIF1	99	69.972	Cavia_porcellus
ENSFCAG00000029742	RIF1	100	77.183	ENSCCAG00000024760	RIF1	100	77.062	Cebus_capucinus
ENSFCAG00000029742	RIF1	100	79.598	ENSCATG00000033353	RIF1	100	79.477	Cercocebus_atys
ENSFCAG00000029742	RIF1	96	73.319	ENSCLAG00000001517	RIF1	99	73.278	Chinchilla_lanigera
ENSFCAG00000029742	RIF1	100	79.718	ENSCSAG00000016089	RIF1	100	79.598	Chlorocebus_sabaeus
ENSFCAG00000029742	RIF1	97	74.348	ENSCHOG00000007187	RIF1	97	74.348	Choloepus_hoffmanni
ENSFCAG00000029742	RIF1	88	72.107	ENSCPBG00000025885	RIF1	96	72.700	Chrysemys_picta_bellii
ENSFCAG00000029742	RIF1	100	78.560	ENSCANG00000028962	RIF1	100	79.058	Colobus_angolensis_palliatus
ENSFCAG00000029742	RIF1	99	69.262	ENSCGRG00001024589	Rif1	100	69.154	Cricetulus_griseus_chok1gshd
ENSFCAG00000029742	RIF1	99	70.452	ENSCGRG00000010713	Rif1	100	70.342	Cricetulus_griseus_crigri
ENSFCAG00000029742	RIF1	62	54.086	ENSCSEG00000003945	rif1	67	54.086	Cynoglossus_semilaevis
ENSFCAG00000029742	RIF1	64	48.089	ENSCVAG00000022479	rif1	68	47.896	Cyprinodon_variegatus
ENSFCAG00000029742	RIF1	99	76.628	ENSDNOG00000011194	RIF1	97	76.537	Dasypus_novemcinctus
ENSFCAG00000029742	RIF1	94	73.030	ENSETEG00000012421	RIF1	92	72.576	Echinops_telfairi
ENSFCAG00000029742	RIF1	95	94.667	ENSEASG00005023434	RIF1	99	94.667	Equus_asinus_asinus
ENSFCAG00000029742	RIF1	97	93.051	ENSECAG00000012679	RIF1	100	93.051	Equus_caballus
ENSFCAG00000029742	RIF1	62	50.603	ENSELUG00000006826	rif1	56	50.473	Esox_lucius
ENSFCAG00000029742	RIF1	76	64.401	ENSFALG00000013874	RIF1	89	64.725	Ficedula_albicollis
ENSFCAG00000029742	RIF1	99	74.035	ENSFDAG00000006538	RIF1	99	74.023	Fukomys_damarensis
ENSFCAG00000029742	RIF1	62	50.203	ENSFHEG00000013721	rif1	66	49.407	Fundulus_heteroclitus
ENSFCAG00000029742	RIF1	52	55.714	ENSGMOG00000003517	rif1	79	55.714	Gadus_morhua
ENSFCAG00000029742	RIF1	79	65.487	ENSGALG00000012484	RIF1	91	65.588	Gallus_gallus
ENSFCAG00000029742	RIF1	62	54.352	ENSGAFG00000017196	rif1	69	54.011	Gambusia_affinis
ENSFCAG00000029742	RIF1	59	55.102	ENSGACG00000008579	rif1	66	54.618	Gasterosteus_aculeatus
ENSFCAG00000029742	RIF1	88	71.772	ENSGAGG00000012595	RIF1	97	72.372	Gopherus_agassizii
ENSFCAG00000029742	RIF1	90	89.700	ENSGGOG00000040178	RIF1	96	89.700	Gorilla_gorilla
ENSFCAG00000029742	RIF1	60	56.067	ENSHBUG00000007125	rif1	66	56.067	Haplochromis_burtoni
ENSFCAG00000029742	RIF1	95	73.695	ENSHGLG00100009807	RIF1	99	73.991	Heterocephalus_glaber_male
ENSFCAG00000029742	RIF1	63	49.435	ENSHCOG00000015943	rif1	60	49.435	Hippocampus_comes
ENSFCAG00000029742	RIF1	50	52.080	ENSIPUG00000021703	rif1	53	50.458	Ictalurus_punctatus
ENSFCAG00000029742	RIF1	100	77.262	ENSSTOG00000020712	RIF1	100	77.462	Ictidomys_tridecemlineatus
ENSFCAG00000029742	RIF1	99	68.808	ENSJJAG00000023000	Rif1	100	68.959	Jaculus_jaculus
ENSFCAG00000029742	RIF1	64	49.451	ENSKMAG00000002852	rif1	67	49.373	Kryptolebias_marmoratus
ENSFCAG00000029742	RIF1	63	50.591	ENSLBEG00000023196	rif1	60	50.591	Labrus_bergylta
ENSFCAG00000029742	RIF1	85	63.018	ENSLACG00000005425	RIF1	89	63.018	Latimeria_chalumnae
ENSFCAG00000029742	RIF1	62	54.712	ENSLOCG00000002657	rif1	82	52.769	Lepisosteus_oculatus
ENSFCAG00000029742	RIF1	99	76.892	ENSLAFG00000009796	RIF1	100	76.892	Loxodonta_africana
ENSFCAG00000029742	RIF1	100	79.557	ENSMFAG00000032233	RIF1	100	79.437	Macaca_fascicularis
ENSFCAG00000029742	RIF1	100	79.598	ENSMMUG00000008611	RIF1	100	79.477	Macaca_mulatta
ENSFCAG00000029742	RIF1	100	79.638	ENSMNEG00000031616	RIF1	100	79.517	Macaca_nemestrina
ENSFCAG00000029742	RIF1	100	79.638	ENSMLEG00000042945	RIF1	100	79.517	Mandrillus_leucophaeus
ENSFCAG00000029742	RIF1	75	48.758	ENSMAMG00000001745	rif1	65	48.978	Mastacembelus_armatus
ENSFCAG00000029742	RIF1	64	50.624	ENSMZEG00005020920	rif1	70	50.546	Maylandia_zebra
ENSFCAG00000029742	RIF1	83	61.648	ENSMGAG00000012732	RIF1	91	61.756	Meleagris_gallopavo
ENSFCAG00000029742	RIF1	95	86.351	ENSMAUG00000013158	Rif1	99	86.351	Mesocricetus_auratus
ENSFCAG00000029742	RIF1	100	81.529	ENSMICG00000046127	RIF1	100	81.529	Microcebus_murinus
ENSFCAG00000029742	RIF1	99	68.838	ENSMOCG00000009381	Rif1	100	68.785	Microtus_ochrogaster
ENSFCAG00000029742	RIF1	66	49.400	ENSMMOG00000006519	rif1	67	49.038	Mola_mola
ENSFCAG00000029742	RIF1	100	59.745	ENSMODG00000003703	RIF1	100	59.547	Monodelphis_domestica
ENSFCAG00000029742	RIF1	65	47.685	ENSMALG00000016759	rif1	74	48.276	Monopterus_albus
ENSFCAG00000029742	RIF1	99	67.713	MGP_CAROLIEiJ_G0023555	Rif1	100	67.593	Mus_caroli
ENSFCAG00000029742	RIF1	99	68.444	ENSMUSG00000036202	Rif1	100	68.324	Mus_musculus
ENSFCAG00000029742	RIF1	99	67.754	MGP_PahariEiJ_G0025006	Rif1	100	67.551	Mus_pahari
ENSFCAG00000029742	RIF1	99	68.182	MGP_SPRETEiJ_G0024476	Rif1	100	68.061	Mus_spretus
ENSFCAG00000029742	RIF1	100	86.393	ENSMPUG00000000371	RIF1	100	86.393	Mustela_putorius_furo
ENSFCAG00000029742	RIF1	90	79.650	ENSMLUG00000003376	RIF1	100	79.650	Myotis_lucifugus
ENSFCAG00000029742	RIF1	100	72.021	ENSNGAG00000009268	Rif1	100	71.767	Nannospalax_galili
ENSFCAG00000029742	RIF1	62	50.718	ENSNBRG00000014257	rif1	69	49.653	Neolamprologus_brichardi
ENSFCAG00000029742	RIF1	100	78.785	ENSNLEG00000010955	RIF1	100	78.745	Nomascus_leucogenys
ENSFCAG00000029742	RIF1	79	79.464	ENSMEUG00000007601	-	85	79.464	Notamacropus_eugenii
ENSFCAG00000029742	RIF1	99	70.539	ENSODEG00000003950	RIF1	99	70.992	Octodon_degus
ENSFCAG00000029742	RIF1	64	50.743	ENSONIG00000013657	rif1	61	63.415	Oreochromis_niloticus
ENSFCAG00000029742	RIF1	81	75.330	ENSOANG00000006078	-	83	75.330	Ornithorhynchus_anatinus
ENSFCAG00000029742	RIF1	100	77.084	ENSOCUG00000017435	RIF1	100	76.963	Oryctolagus_cuniculus
ENSFCAG00000029742	RIF1	62	48.390	ENSORLG00020001302	rif1	67	48.133	Oryzias_latipes_hni
ENSFCAG00000029742	RIF1	62	48.372	ENSORLG00015000009	rif1	67	48.292	Oryzias_latipes_hsok
ENSFCAG00000029742	RIF1	61	48.996	ENSOMEG00000021513	rif1	67	47.908	Oryzias_melastigma
ENSFCAG00000029742	RIF1	99	77.907	ENSOGAG00000006141	RIF1	99	77.907	Otolemur_garnettii
ENSFCAG00000029742	RIF1	100	82.012	ENSOARG00000008930	RIF1	100	82.012	Ovis_aries
ENSFCAG00000029742	RIF1	100	79.405	ENSPPAG00000023754	RIF1	100	79.155	Pan_paniscus
ENSFCAG00000029742	RIF1	100	98.831	ENSPPRG00000003618	RIF1	100	98.831	Panthera_pardus
ENSFCAG00000029742	RIF1	100	98.911	ENSPTIG00000020652	RIF1	100	98.911	Panthera_tigris_altaica
ENSFCAG00000029742	RIF1	100	79.364	ENSPTRG00000012534	RIF1	100	79.115	Pan_troglodytes
ENSFCAG00000029742	RIF1	100	79.598	ENSPANG00000008525	RIF1	100	79.477	Papio_anubis
ENSFCAG00000029742	RIF1	74	47.619	ENSPKIG00000004267	rif1	72	52.653	Paramormyrops_kingsleyae
ENSFCAG00000029742	RIF1	65	45.982	ENSPMGG00000016141	rif1	79	45.347	Periophthalmus_magnuspinnatus
ENSFCAG00000029742	RIF1	99	70.016	ENSPEMG00000000446	Rif1	99	69.581	Peromyscus_maniculatus_bairdii
ENSFCAG00000029742	RIF1	95	67.883	ENSPCIG00000009185	RIF1	97	66.237	Phascolarctos_cinereus
ENSFCAG00000029742	RIF1	59	52.311	ENSPFOG00000000554	-	67	52.262	Poecilia_formosa
ENSFCAG00000029742	RIF1	66	51.799	ENSPFOG00000017804	rif1	70	51.220	Poecilia_formosa
ENSFCAG00000029742	RIF1	66	51.108	ENSPLAG00000017945	rif1	73	51.108	Poecilia_latipinna
ENSFCAG00000029742	RIF1	56	50.736	ENSPMEG00000006897	-	66	50.686	Poecilia_mexicana
ENSFCAG00000029742	RIF1	66	50.546	ENSPREG00000018052	rif1	69	53.936	Poecilia_reticulata
ENSFCAG00000029742	RIF1	100	79.437	ENSPPYG00000012846	RIF1	100	79.316	Pongo_abelii
ENSFCAG00000029742	RIF1	83	83.495	ENSPCAG00000009032	RIF1	83	83.495	Procavia_capensis
ENSFCAG00000029742	RIF1	100	81.046	ENSPCOG00000027888	RIF1	100	81.046	Propithecus_coquereli
ENSFCAG00000029742	RIF1	93	90.061	ENSPVAG00000014276	RIF1	95	90.061	Pteropus_vampyrus
ENSFCAG00000029742	RIF1	64	49.018	ENSPNYG00000012940	rif1	69	48.940	Pundamilia_nyererei
ENSFCAG00000029742	RIF1	65	52.188	ENSPNAG00000016685	rif1	67	52.291	Pygocentrus_nattereri
ENSFCAG00000029742	RIF1	99	67.629	ENSRNOG00000054901	Rif1	100	67.509	Rattus_norvegicus
ENSFCAG00000029742	RIF1	100	78.592	ENSRBIG00000003704	RIF1	100	78.511	Rhinopithecus_bieti
ENSFCAG00000029742	RIF1	100	79.598	ENSRROG00000028206	RIF1	100	79.517	Rhinopithecus_roxellana
ENSFCAG00000029742	RIF1	100	74.336	ENSSBOG00000029530	RIF1	100	74.156	Saimiri_boliviensis_boliviensis
ENSFCAG00000029742	RIF1	99	58.882	ENSSHAG00000018552	RIF1	100	58.291	Sarcophilus_harrisii
ENSFCAG00000029742	RIF1	65	52.878	ENSSFOG00015021539	rif1	73	51.727	Scleropages_formosus
ENSFCAG00000029742	RIF1	64	49.418	ENSSMAG00000011704	rif1	62	49.728	Scophthalmus_maximus
ENSFCAG00000029742	RIF1	62	50.405	ENSSDUG00000015632	rif1	68	49.763	Seriola_dumerili
ENSFCAG00000029742	RIF1	50	50.358	ENSSLDG00000019531	rif1	51	49.613	Seriola_lalandi_dorsalis
ENSFCAG00000029742	RIF1	61	86.486	ENSSARG00000007161	-	62	81.695	Sorex_araneus
ENSFCAG00000029742	RIF1	85	61.962	ENSSPUG00000003062	RIF1	93	61.962	Sphenodon_punctatus
ENSFCAG00000029742	RIF1	50	57.260	ENSSPAG00000018359	rif1	76	57.260	Stegastes_partitus
ENSFCAG00000029742	RIF1	100	82.602	ENSSSCG00000016395	RIF1	100	82.602	Sus_scrofa
ENSFCAG00000029742	RIF1	63	50.079	ENSTRUG00000015808	rif1	70	49.608	Takifugu_rubripes
ENSFCAG00000029742	RIF1	67	47.866	ENSTNIG00000011538	rif1	64	52.158	Tetraodon_nigroviridis
ENSFCAG00000029742	RIF1	83	89.241	ENSTBEG00000016082	RIF1	82	89.241	Tupaia_belangeri
ENSFCAG00000029742	RIF1	100	84.058	ENSTTRG00000011190	RIF1	100	84.058	Tursiops_truncatus
ENSFCAG00000029742	RIF1	86	94.473	ENSUAMG00000026385	RIF1	97	94.473	Ursus_americanus
ENSFCAG00000029742	RIF1	100	88.880	ENSUMAG00000000337	RIF1	100	88.840	Ursus_maritimus
ENSFCAG00000029742	RIF1	100	80.459	ENSVPAG00000002162	RIF1	100	80.749	Vicugna_pacos
ENSFCAG00000029742	RIF1	100	85.956	ENSVVUG00000011293	RIF1	100	85.875	Vulpes_vulpes
ENSFCAG00000029742	RIF1	66	47.812	ENSXMAG00000000506	rif1	67	48.009	Xiphophorus_maculatus