EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000030530 (Gene tree)
Gene ID: 101083959
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha%2C oocyte form-like
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 2640 bases
Position: chrD1:42488196-42490835
Accession: 101083959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000022407	GTP_EFTU	PF00009.27	8.1e-54	1	1
ENSFCAP00000022407	GTP_EFTU_D2	PF03144.25	7.9e-14	1	1
ENSFCAP00000022407	GTP_EFTU_D3	PF03143.17	1.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000027803	-	1476	XM_003992621	ENSFCAP00000022407	460 (aa)	XP_003992670	M3X705

Gene Model

Click here to download ENSFCAG00000030530's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03013	RNA transport	KEGG
fca05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000030530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000030530	-	95	39.588	ENSFCAG00000001810	HBS1L	82	39.588
ENSFCAG00000030530	-	99	89.783	ENSFCAG00000030977	EEF1A1	99	89.783
ENSFCAG00000030530	-	95	30.405	ENSFCAG00000003103	TUFM	55	30.405
ENSFCAG00000030530	-	99	90.000	ENSFCAG00000028726	EEF1A2	99	90.000
ENSFCAG00000030530	-	96	37.104	ENSFCAG00000001558	GSPT2	68	37.104
ENSFCAG00000030530	-	96	38.235	ENSFCAG00000022281	GSPT1	67	38.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000030530	-	67	84.691	ENSAPOG00000004757	eef1a1l1	99	98.438	Acanthochromis_polyacanthus
ENSFCAG00000030530	-	100	85.249	ENSAMEG00000004317	-	100	85.249	Ailuropoda_melanoleuca
ENSFCAG00000030530	-	100	85.466	ENSAMEG00000009677	-	100	85.466	Ailuropoda_melanoleuca
ENSFCAG00000030530	-	100	85.900	ENSCAFG00000013249	-	100	85.900	Canis_familiaris
ENSFCAG00000030530	-	100	85.900	ENSCAFG00020020007	-	100	85.900	Canis_lupus_dingo
ENSFCAG00000030530	-	100	89.371	ENSCPBG00000000748	-	100	89.371	Chrysemys_picta_bellii
ENSFCAG00000030530	-	100	88.937	ENSCPBG00000000646	-	100	88.937	Chrysemys_picta_bellii
ENSFCAG00000030530	-	99	89.565	ENSDARG00000020850	eef1a1l1	99	89.565	Danio_rerio
ENSFCAG00000030530	-	85	89.848	ENSEASG00005018013	-	99	89.848	Equus_asinus_asinus
ENSFCAG00000030530	-	98	94.934	ENSEASG00005012365	-	99	93.233	Equus_asinus_asinus
ENSFCAG00000030530	-	100	92.842	ENSECAG00000022260	-	100	92.842	Equus_caballus
ENSFCAG00000030530	-	100	88.286	ENSELUG00000023536	eef1a1l1	100	88.286	Esox_lucius
ENSFCAG00000030530	-	100	89.588	ENSGAGG00000000642	-	100	89.588	Gopherus_agassizii
ENSFCAG00000030530	-	100	89.588	ENSGAGG00000000648	-	100	89.588	Gopherus_agassizii
ENSFCAG00000030530	-	90	86.925	ENSLBEG00000002790	eef1a1l1	99	86.925	Labrus_bergylta
ENSFCAG00000030530	-	100	86.551	ENSLAFG00000028081	-	99	86.551	Loxodonta_africana
ENSFCAG00000030530	-	100	93.926	ENSLAFG00000025161	-	100	93.926	Loxodonta_africana
ENSFCAG00000030530	-	75	91.908	ENSOANG00000012066	-	100	91.908	Ornithorhynchus_anatinus
ENSFCAG00000030530	-	90	87.651	ENSOMEG00000006888	-	99	87.651	Oryzias_melastigma
ENSFCAG00000030530	-	100	93.059	ENSOARG00000002943	-	100	93.059	Ovis_aries
ENSFCAG00000030530	-	100	84.816	ENSPPRG00000008525	-	100	84.816	Panthera_pardus
ENSFCAG00000030530	-	98	99.333	ENSPPRG00000005678	-	97	99.333	Panthera_pardus
ENSFCAG00000030530	-	100	86.985	ENSPTIG00000006939	-	100	86.985	Panthera_tigris_altaica
ENSFCAG00000030530	-	100	89.371	ENSPSIG00000008610	-	100	89.371	Pelodiscus_sinensis
ENSFCAG00000030530	-	66	96.296	ENSPVAG00000007682	-	65	96.296	Pteropus_vampyrus
ENSFCAG00000030530	-	100	82.213	ENSSMAG00000018455	-	99	82.213	Scophthalmus_maximus
ENSFCAG00000030530	-	100	88.937	ENSSPUG00000003655	-	100	88.937	Sphenodon_punctatus
ENSFCAG00000030530	-	97	83.036	ENSSSCG00000038035	-	100	82.430	Sus_scrofa
ENSFCAG00000030530	-	100	92.625	ENSSSCG00000034113	-	100	92.625	Sus_scrofa
ENSFCAG00000030530	-	100	83.731	ENSUAMG00000008928	-	100	83.731	Ursus_americanus
ENSFCAG00000030530	-	100	82.863	ENSUAMG00000007676	-	100	82.863	Ursus_americanus
ENSFCAG00000030530	-	52	81.092	ENSUAMG00000006085	-	99	81.092	Ursus_americanus
ENSFCAG00000030530	-	100	85.466	ENSUMAG00000013211	-	100	85.466	Ursus_maritimus
ENSFCAG00000030530	-	100	85.683	ENSVVUG00000026886	-	100	85.683	Vulpes_vulpes
ENSFCAG00000030530	-	100	89.154	ENSXETG00000022604	eef1a1o	100	89.154	Xenopus_tropicalis