EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000031148 (Gene tree)
Gene ID: 101089093
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 330 bases
Position: chrA3:100793202-100793531
Accession: 101089093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000022040	LSM	PF01423.22	7.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000030533	-	330	XM_011281195	ENSFCAP00000022040	109 (aa)	XP_011279497	M3X5Y9

Gene Model

Click here to download ENSFCAG00000031148's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000031148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000031148	-	72	48.718	ENSFCAG00000037511	-	87	50.685
ENSFCAG00000031148	-	72	76.923	ENSFCAG00000029966	-	98	78.571
ENSFCAG00000031148	-	60	40.000	ENSFCAG00000003047	LSM6	81	40.000
ENSFCAG00000031148	-	69	62.667	ENSFCAG00000021942	-	98	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000031148	-	72	76.923	ENSG00000139343	SNRPF	98	78.571	Homo_sapiens
ENSFCAG00000031148	-	91	62.626	ENSAPOG00000003377	snrpf	82	64.762	Acanthochromis_polyacanthus
ENSFCAG00000031148	-	71	76.623	ENSAMEG00000002166	-	98	78.313	Ailuropoda_melanoleuca
ENSFCAG00000031148	-	70	65.789	ENSAMEG00000018718	-	98	69.048	Ailuropoda_melanoleuca
ENSFCAG00000031148	-	70	73.684	ENSACIG00000013216	snrpf	96	75.610	Amphilophus_citrinellus
ENSFCAG00000031148	-	70	73.684	ENSAOCG00000015108	snrpf	96	75.610	Amphiprion_ocellaris
ENSFCAG00000031148	-	70	73.684	ENSAPEG00000022022	snrpf	96	75.610	Amphiprion_percula
ENSFCAG00000031148	-	70	73.684	ENSATEG00000022625	snrpf	88	75.610	Anabas_testudineus
ENSFCAG00000031148	-	71	76.623	ENSACAG00000014073	SNRPF	95	78.313	Anolis_carolinensis
ENSFCAG00000031148	-	72	76.923	ENSANAG00000032845	SNRPF	98	78.571	Aotus_nancymaae
ENSFCAG00000031148	-	69	49.333	ENSANAG00000025860	-	97	53.571	Aotus_nancymaae
ENSFCAG00000031148	-	80	65.517	ENSANAG00000020297	-	80	67.742	Aotus_nancymaae
ENSFCAG00000031148	-	70	73.684	ENSACLG00000016066	snrpf	96	75.610	Astatotilapia_calliptera
ENSFCAG00000031148	-	69	73.333	ENSAMXG00000007421	snrpf	98	76.190	Astyanax_mexicanus
ENSFCAG00000031148	-	72	73.077	ENSBTAG00000050012	-	93	72.000	Bos_taurus
ENSFCAG00000031148	-	72	76.923	ENSBTAG00000016271	SNRPF	98	78.571	Bos_taurus
ENSFCAG00000031148	-	71	58.442	WBGene00004918	snr-5	88	57.500	Caenorhabditis_elegans
ENSFCAG00000031148	-	72	76.923	ENSCJAG00000002705	-	98	78.571	Callithrix_jacchus
ENSFCAG00000031148	-	82	74.157	ENSCAFG00000006395	-	86	75.000	Canis_familiaris
ENSFCAG00000031148	-	72	69.231	ENSCAFG00000031151	-	98	71.429	Canis_familiaris
ENSFCAG00000031148	-	72	65.385	ENSCAFG00020013161	-	74	71.429	Canis_lupus_dingo
ENSFCAG00000031148	-	72	69.231	ENSCAFG00020010823	-	98	71.429	Canis_lupus_dingo
ENSFCAG00000031148	-	72	66.667	ENSTSYG00000030635	-	98	69.048	Carlito_syrichta
ENSFCAG00000031148	-	69	69.737	ENSTSYG00000036502	-	98	72.941	Carlito_syrichta
ENSFCAG00000031148	-	73	73.750	ENSTSYG00000031636	-	67	73.750	Carlito_syrichta
ENSFCAG00000031148	-	71	76.623	ENSCAPG00000007242	SNRPF	98	78.313	Cavia_aperea
ENSFCAG00000031148	-	72	76.923	ENSCPOG00000013898	SNRPF	98	78.571	Cavia_porcellus
ENSFCAG00000031148	-	67	75.342	ENSCCAG00000017356	-	98	77.381	Cebus_capucinus
ENSFCAG00000031148	-	92	63.000	ENSCCAG00000033627	-	72	63.000	Cebus_capucinus
ENSFCAG00000031148	-	72	76.923	ENSCCAG00000037378	-	98	78.571	Cebus_capucinus
ENSFCAG00000031148	-	72	76.923	ENSCLAG00000007200	SNRPF	98	78.571	Chinchilla_lanigera
ENSFCAG00000031148	-	94	69.903	ENSCSAG00000003602	-	89	71.560	Chlorocebus_sabaeus
ENSFCAG00000031148	-	58	76.190	ENSCHOG00000009392	SNRPF	98	76.190	Choloepus_hoffmanni
ENSFCAG00000031148	-	77	69.048	ENSCPBG00000026463	-	98	69.048	Chrysemys_picta_bellii
ENSFCAG00000031148	-	76	73.494	ENSCPBG00000024287	-	74	67.021	Chrysemys_picta_bellii
ENSFCAG00000031148	-	77	67.857	ENSCPBG00000001985	-	98	67.857	Chrysemys_picta_bellii
ENSFCAG00000031148	-	69	72.000	ENSCPBG00000006227	-	98	73.810	Chrysemys_picta_bellii
ENSFCAG00000031148	-	76	66.265	ENSCSAVG00000007498	-	94	66.265	Ciona_savignyi
ENSFCAG00000031148	-	72	76.923	ENSCGRG00001017100	-	98	78.571	Cricetulus_griseus_chok1gshd
ENSFCAG00000031148	-	69	72.000	ENSCGRG00001008965	-	65	75.000	Cricetulus_griseus_chok1gshd
ENSFCAG00000031148	-	73	73.750	ENSCGRG00000018878	-	94	72.000	Cricetulus_griseus_crigri
ENSFCAG00000031148	-	72	76.923	ENSCGRG00000000336	-	98	78.571	Cricetulus_griseus_crigri
ENSFCAG00000031148	-	72	73.077	ENSCSEG00000004748	snrpf	98	75.000	Cynoglossus_semilaevis
ENSFCAG00000031148	-	86	62.766	ENSCVAG00000000397	snrpf	79	65.000	Cyprinodon_variegatus
ENSFCAG00000031148	-	69	71.429	ENSDARG00000105037	snrpf	98	74.419	Danio_rerio
ENSFCAG00000031148	-	90	68.367	ENSDNOG00000043775	-	67	70.192	Dasypus_novemcinctus
ENSFCAG00000031148	-	91	66.667	ENSDNOG00000048989	-	93	69.231	Dasypus_novemcinctus
ENSFCAG00000031148	-	74	69.136	ENSDNOG00000049373	-	77	70.787	Dasypus_novemcinctus
ENSFCAG00000031148	-	72	64.103	ENSDORG00000029740	-	98	66.667	Dipodomys_ordii
ENSFCAG00000031148	-	65	69.014	ENSDORG00000025351	-	99	69.014	Dipodomys_ordii
ENSFCAG00000031148	-	79	56.977	FBgn0000426	SmF	98	56.977	Drosophila_melanogaster
ENSFCAG00000031148	-	72	76.923	ENSETEG00000001558	-	98	78.571	Echinops_telfairi
ENSFCAG00000031148	-	73	56.250	ENSEBUG00000001793	-	72	61.194	Eptatretus_burgeri
ENSFCAG00000031148	-	82	76.404	ENSECAG00000019817	SNRPF	85	72.115	Equus_caballus
ENSFCAG00000031148	-	71	76.623	ENSEEUG00000013509	SNRPF	98	78.313	Erinaceus_europaeus
ENSFCAG00000031148	-	72	73.077	ENSELUG00000003121	RUXF	98	75.000	Esox_lucius
ENSFCAG00000031148	-	98	61.682	ENSELUG00000007737	RUXF	97	73.810	Esox_lucius
ENSFCAG00000031148	-	71	76.623	ENSFALG00000010799	SNRPF	97	78.313	Ficedula_albicollis
ENSFCAG00000031148	-	72	76.923	ENSFDAG00000002831	-	98	78.571	Fukomys_damarensis
ENSFCAG00000031148	-	94	60.194	ENSFHEG00000003240	snrpf	93	62.385	Fundulus_heteroclitus
ENSFCAG00000031148	-	71	74.026	ENSGMOG00000007741	snrpf	98	75.904	Gadus_morhua
ENSFCAG00000031148	-	72	76.923	ENSGALG00000011409	SNRPF	98	78.571	Gallus_gallus
ENSFCAG00000031148	-	70	73.684	ENSGAFG00000016187	snrpf	94	75.610	Gambusia_affinis
ENSFCAG00000031148	-	71	74.026	ENSGACG00000020055	snrpf	98	75.904	Gasterosteus_aculeatus
ENSFCAG00000031148	-	68	64.935	ENSGAGG00000020974	-	65	64.935	Gopherus_agassizii
ENSFCAG00000031148	-	79	73.256	ENSGAGG00000012945	-	77	73.256	Gopherus_agassizii
ENSFCAG00000031148	-	71	68.831	ENSGAGG00000022991	-	87	68.831	Gopherus_agassizii
ENSFCAG00000031148	-	63	66.667	ENSGAGG00000014132	-	83	66.667	Gopherus_agassizii
ENSFCAG00000031148	-	53	74.138	ENSGAGG00000011163	-	96	74.138	Gopherus_agassizii
ENSFCAG00000031148	-	72	60.759	ENSGGOG00000039564	-	90	58.667	Gorilla_gorilla
ENSFCAG00000031148	-	77	67.857	ENSGGOG00000039936	-	95	67.857	Gorilla_gorilla
ENSFCAG00000031148	-	72	76.923	ENSGGOG00000001127	-	98	78.571	Gorilla_gorilla
ENSFCAG00000031148	-	72	76.923	ENSHGLG00000021172	-	98	78.571	Heterocephalus_glaber_female
ENSFCAG00000031148	-	72	76.923	ENSHGLG00000009108	SNRPF	98	78.571	Heterocephalus_glaber_female
ENSFCAG00000031148	-	72	76.923	ENSHGLG00100019596	-	98	78.571	Heterocephalus_glaber_male
ENSFCAG00000031148	-	71	76.623	ENSHGLG00100008103	-	98	78.313	Heterocephalus_glaber_male
ENSFCAG00000031148	-	60	61.111	ENSHCOG00000018663	snrpf	56	61.111	Hippocampus_comes
ENSFCAG00000031148	-	72	74.359	ENSIPUG00000018994	snrpf	98	76.190	Ictalurus_punctatus
ENSFCAG00000031148	-	72	76.923	ENSSTOG00000010434	-	98	78.571	Ictidomys_tridecemlineatus
ENSFCAG00000031148	-	77	65.476	ENSJJAG00000004558	-	98	65.476	Jaculus_jaculus
ENSFCAG00000031148	-	60	69.231	ENSJJAG00000004828	-	97	69.231	Jaculus_jaculus
ENSFCAG00000031148	-	72	76.923	ENSJJAG00000011272	-	98	78.571	Jaculus_jaculus
ENSFCAG00000031148	-	77	67.857	ENSJJAG00000010502	-	98	67.857	Jaculus_jaculus
ENSFCAG00000031148	-	72	73.077	ENSKMAG00000013566	snrpf	98	75.000	Kryptolebias_marmoratus
ENSFCAG00000031148	-	72	73.077	ENSLBEG00000008800	snrpf	98	75.000	Labrus_bergylta
ENSFCAG00000031148	-	78	69.412	ENSLACG00000002456	-	77	72.222	Latimeria_chalumnae
ENSFCAG00000031148	-	72	73.077	ENSLOCG00000015744	snrpf	98	75.000	Lepisosteus_oculatus
ENSFCAG00000031148	-	71	76.623	ENSLAFG00000017426	SNRPF	97	78.313	Loxodonta_africana
ENSFCAG00000031148	-	70	72.368	ENSMAMG00000016593	snrpf	96	74.390	Mastacembelus_armatus
ENSFCAG00000031148	-	70	73.684	ENSMZEG00005014701	snrpf	96	75.610	Maylandia_zebra
ENSFCAG00000031148	-	72	74.359	ENSMGAG00000011453	-	76	76.190	Meleagris_gallopavo
ENSFCAG00000031148	-	61	75.758	ENSMAUG00000019737	-	97	77.778	Mesocricetus_auratus
ENSFCAG00000031148	-	61	75.758	ENSMAUG00000016909	-	97	77.778	Mesocricetus_auratus
ENSFCAG00000031148	-	74	56.790	ENSMAUG00000010289	-	93	56.790	Mesocricetus_auratus
ENSFCAG00000031148	-	72	71.795	ENSMAUG00000008799	-	98	73.810	Mesocricetus_auratus
ENSFCAG00000031148	-	78	74.118	ENSMICG00000030494	-	87	69.725	Microcebus_murinus
ENSFCAG00000031148	-	72	76.923	ENSMICG00000012153	-	98	78.571	Microcebus_murinus
ENSFCAG00000031148	-	61	62.121	ENSMOCG00000020220	-	97	63.636	Microtus_ochrogaster
ENSFCAG00000031148	-	69	64.000	ENSMOCG00000022166	-	90	66.265	Microtus_ochrogaster
ENSFCAG00000031148	-	72	76.923	ENSMOCG00000020437	Snrpf	98	78.571	Microtus_ochrogaster
ENSFCAG00000031148	-	68	72.973	ENSMMOG00000007127	snrpf	98	75.904	Mola_mola
ENSFCAG00000031148	-	74	77.778	ENSMODG00000008091	SNRPF	76	79.310	Monodelphis_domestica
ENSFCAG00000031148	-	70	73.684	ENSMALG00000012328	snrpf	96	75.610	Monopterus_albus
ENSFCAG00000031148	-	72	76.923	MGP_CAROLIEiJ_G0015735	-	98	78.571	Mus_caroli
ENSFCAG00000031148	-	72	76.923	ENSMUSG00000020018	Snrpf	98	78.571	Mus_musculus
ENSFCAG00000031148	-	72	76.923	MGP_PahariEiJ_G0031350	Snrpf	98	78.571	Mus_pahari
ENSFCAG00000031148	-	72	76.923	MGP_SPRETEiJ_G0016553	Snrpf	98	78.571	Mus_spretus
ENSFCAG00000031148	-	82	73.034	ENSMPUG00000007176	-	86	73.958	Mustela_putorius_furo
ENSFCAG00000031148	-	71	76.623	ENSMLUG00000013577	-	98	78.313	Myotis_lucifugus
ENSFCAG00000031148	-	84	60.870	ENSMLUG00000026269	-	87	60.870	Myotis_lucifugus
ENSFCAG00000031148	-	82	77.528	ENSMLUG00000027932	-	90	78.947	Myotis_lucifugus
ENSFCAG00000031148	-	82	77.528	ENSMLUG00000029201	-	90	78.947	Myotis_lucifugus
ENSFCAG00000031148	-	82	77.528	ENSMLUG00000026149	-	90	78.947	Myotis_lucifugus
ENSFCAG00000031148	-	58	66.667	ENSNGAG00000005851	-	71	65.000	Nannospalax_galili
ENSFCAG00000031148	-	72	76.923	ENSNGAG00000024292	-	98	78.571	Nannospalax_galili
ENSFCAG00000031148	-	71	74.026	ENSNBRG00000011682	snrpf	85	75.904	Neolamprologus_brichardi
ENSFCAG00000031148	-	68	58.108	ENSMEUG00000000671	SNRPF	98	62.651	Notamacropus_eugenii
ENSFCAG00000031148	-	72	76.923	ENSODEG00000010328	-	98	78.571	Octodon_degus
ENSFCAG00000031148	-	72	75.641	ENSOCUG00000010925	SNRPF	74	77.381	Oryctolagus_cuniculus
ENSFCAG00000031148	-	68	72.973	ENSORLG00020008216	snrpf	98	75.904	Oryzias_latipes_hni
ENSFCAG00000031148	-	68	72.973	ENSORLG00015007418	snrpf	98	75.904	Oryzias_latipes_hsok
ENSFCAG00000031148	-	70	73.684	ENSOMEG00000003018	snrpf	96	75.610	Oryzias_melastigma
ENSFCAG00000031148	-	72	78.205	ENSOGAG00000030323	-	98	79.762	Otolemur_garnettii
ENSFCAG00000031148	-	94	66.355	ENSOARG00000011853	-	96	68.142	Ovis_aries
ENSFCAG00000031148	-	72	60.759	ENSPPAG00000037479	-	91	58.667	Pan_paniscus
ENSFCAG00000031148	-	77	67.857	ENSPPAG00000037544	-	95	67.857	Pan_paniscus
ENSFCAG00000031148	-	72	76.923	ENSPPRG00000005875	-	98	78.571	Panthera_pardus
ENSFCAG00000031148	-	77	96.429	ENSPPRG00000007449	-	86	96.429	Panthera_pardus
ENSFCAG00000031148	-	72	76.923	ENSPTIG00000007520	SNRPF	98	78.571	Panthera_tigris_altaica
ENSFCAG00000031148	-	77	98.810	ENSPTIG00000005117	-	100	98.810	Panthera_tigris_altaica
ENSFCAG00000031148	-	77	67.857	ENSPTRG00000043814	-	95	67.857	Pan_troglodytes
ENSFCAG00000031148	-	72	63.291	ENSPTRG00000047717	-	91	61.333	Pan_troglodytes
ENSFCAG00000031148	-	71	74.026	ENSPKIG00000014784	snrpf	91	75.904	Paramormyrops_kingsleyae
ENSFCAG00000031148	-	71	76.623	ENSPSIG00000016462	SNRPF	97	78.313	Pelodiscus_sinensis
ENSFCAG00000031148	-	68	72.973	ENSPMGG00000023548	snrpf	98	75.904	Periophthalmus_magnuspinnatus
ENSFCAG00000031148	-	72	76.923	ENSPEMG00000023326	Snrpf	98	78.571	Peromyscus_maniculatus_bairdii
ENSFCAG00000031148	-	70	73.684	ENSPLAG00000023932	snrpf	96	75.610	Poecilia_latipinna
ENSFCAG00000031148	-	70	73.684	ENSPMEG00000003377	snrpf	96	75.610	Poecilia_mexicana
ENSFCAG00000031148	-	70	73.684	ENSPREG00000022635	snrpf	94	75.610	Poecilia_reticulata
ENSFCAG00000031148	-	72	76.923	ENSPPYG00000004847	-	98	78.571	Pongo_abelii
ENSFCAG00000031148	-	72	76.923	ENSPCOG00000023833	-	98	78.571	Propithecus_coquereli
ENSFCAG00000031148	-	72	76.923	ENSPVAG00000009036	SNRPF	98	78.571	Pteropus_vampyrus
ENSFCAG00000031148	-	70	73.684	ENSPNYG00000021712	snrpf	96	75.610	Pundamilia_nyererei
ENSFCAG00000031148	-	70	73.684	ENSPNAG00000019117	snrpf	96	75.610	Pygocentrus_nattereri
ENSFCAG00000031148	-	72	76.923	ENSRNOG00000005556	Snrpf	98	78.571	Rattus_norvegicus
ENSFCAG00000031148	-	69	76.000	ENSRBIG00000030414	-	98	77.381	Rhinopithecus_bieti
ENSFCAG00000031148	-	69	76.000	ENSRROG00000021975	-	98	77.381	Rhinopithecus_roxellana
ENSFCAG00000031148	-	64	49.296	YPR182W	SMX3	83	49.296	Saccharomyces_cerevisiae
ENSFCAG00000031148	-	72	76.923	ENSSBOG00000036179	-	98	78.571	Saimiri_boliviensis_boliviensis
ENSFCAG00000031148	-	72	64.103	ENSSBOG00000032297	-	97	66.667	Saimiri_boliviensis_boliviensis
ENSFCAG00000031148	-	69	76.000	ENSSBOG00000012868	-	98	77.381	Saimiri_boliviensis_boliviensis
ENSFCAG00000031148	-	72	61.728	ENSSBOG00000027638	-	98	64.368	Saimiri_boliviensis_boliviensis
ENSFCAG00000031148	-	74	76.543	ENSSHAG00000012294	SNRPF	78	78.161	Sarcophilus_harrisii
ENSFCAG00000031148	-	57	72.581	ENSSFOG00015021523	snrpf	93	72.581	Scleropages_formosus
ENSFCAG00000031148	-	72	73.077	ENSSMAG00000005533	snrpf	97	75.000	Scophthalmus_maximus
ENSFCAG00000031148	-	58	73.016	ENSSDUG00000016283	snrpf	75	73.016	Seriola_dumerili
ENSFCAG00000031148	-	73	55.000	ENSSLDG00000003885	-	90	56.757	Seriola_lalandi_dorsalis
ENSFCAG00000031148	-	72	73.077	ENSSLDG00000005119	snrpf	98	75.000	Seriola_lalandi_dorsalis
ENSFCAG00000031148	-	70	76.316	ENSSPUG00000014590	-	96	78.049	Sphenodon_punctatus
ENSFCAG00000031148	-	71	74.026	ENSSPAG00000003283	snrpf	94	75.904	Stegastes_partitus
ENSFCAG00000031148	-	72	76.923	ENSSSCG00000000895	SNRPF	98	78.571	Sus_scrofa
ENSFCAG00000031148	-	56	68.852	ENSTRUG00000014956	snrpf	97	71.642	Takifugu_rubripes
ENSFCAG00000031148	-	72	73.077	ENSTNIG00000012672	snrpf	98	75.000	Tetraodon_nigroviridis
ENSFCAG00000031148	-	69	58.667	ENSTTRG00000006070	SNRPF	98	63.095	Tursiops_truncatus
ENSFCAG00000031148	-	77	69.048	ENSUAMG00000001101	-	98	67.857	Ursus_americanus
ENSFCAG00000031148	-	72	76.923	ENSUAMG00000008176	-	98	78.571	Ursus_americanus
ENSFCAG00000031148	-	72	76.923	ENSUMAG00000003528	-	98	78.571	Ursus_maritimus
ENSFCAG00000031148	-	69	68.000	ENSUMAG00000006177	-	98	67.857	Ursus_maritimus
ENSFCAG00000031148	-	72	76.923	ENSVPAG00000008712	-	98	78.571	Vicugna_pacos
ENSFCAG00000031148	-	72	69.231	ENSVVUG00000023821	-	96	68.000	Vulpes_vulpes
ENSFCAG00000031148	-	68	59.211	ENSXETG00000021630	snrpf	98	63.529	Xenopus_tropicalis
ENSFCAG00000031148	-	70	73.684	ENSXCOG00000013860	snrpf	94	75.610	Xiphophorus_couchianus
ENSFCAG00000031148	-	70	73.684	ENSXMAG00000015448	snrpf	96	75.610	Xiphophorus_maculatus