EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000031927 (Gene tree)
Gene ID: 101082697
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 37932 bases
Position: chrD2:73904462-73942393
Accession: 101082697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000018451	TruB_N	PF01509.18	3.2e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000024241	TRUB1-201	3575	XM_003994437	ENSFCAP00000018451	349 (aa)	XP_003994486	M3WVR4

Gene Model

Click here to download ENSFCAG00000031927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000031927's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000031927	TRUB1	72	30.241	ENSFCAG00000005839	TRUB2	90	30.241

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000031927	TRUB1	99	92.816	ENSG00000165832	TRUB1	96	93.134	Homo_sapiens
ENSFCAG00000031927	TRUB1	70	68.980	ENSAPOG00000020565	trub1	89	68.699	Acanthochromis_polyacanthus
ENSFCAG00000031927	TRUB1	97	94.395	ENSAMEG00000014931	TRUB1	96	94.395	Ailuropoda_melanoleuca
ENSFCAG00000031927	TRUB1	81	57.746	ENSACIG00000003060	trub1	94	57.746	Amphilophus_citrinellus
ENSFCAG00000031927	TRUB1	70	68.980	ENSAOCG00000017188	trub1	89	68.699	Amphiprion_ocellaris
ENSFCAG00000031927	TRUB1	70	68.293	ENSAPEG00000015209	trub1	93	66.148	Amphiprion_percula
ENSFCAG00000031927	TRUB1	69	69.295	ENSATEG00000023291	trub1	86	69.295	Anabas_testudineus
ENSFCAG00000031927	TRUB1	79	76.727	ENSAPLG00000006808	TRUB1	99	76.727	Anas_platyrhynchos
ENSFCAG00000031927	TRUB1	78	71.429	ENSACAG00000009282	TRUB1	99	71.429	Anolis_carolinensis
ENSFCAG00000031927	TRUB1	96	94.012	ENSANAG00000022870	TRUB1	95	94.030	Aotus_nancymaae
ENSFCAG00000031927	TRUB1	72	67.460	ENSACLG00000000823	trub1	91	67.460	Astatotilapia_calliptera
ENSFCAG00000031927	TRUB1	75	67.433	ENSAMXG00000015845	trub1	87	67.433	Astyanax_mexicanus
ENSFCAG00000031927	TRUB1	98	93.255	ENSBTAG00000012955	TRUB1	95	94.030	Bos_taurus
ENSFCAG00000031927	TRUB1	99	92.550	ENSCJAG00000047815	TRUB1	95	93.731	Callithrix_jacchus
ENSFCAG00000031927	TRUB1	99	94.828	ENSCAFG00000011688	TRUB1	96	95.224	Canis_familiaris
ENSFCAG00000031927	TRUB1	99	95.115	ENSCAFG00020013237	TRUB1	96	95.522	Canis_lupus_dingo
ENSFCAG00000031927	TRUB1	98	92.962	ENSCHIG00000020884	TRUB1	90	96.000	Capra_hircus
ENSFCAG00000031927	TRUB1	99	91.404	ENSTSYG00000000446	TRUB1	96	90.774	Carlito_syrichta
ENSFCAG00000031927	TRUB1	72	84.127	ENSCAPG00000017088	TRUB1	99	84.127	Cavia_aperea
ENSFCAG00000031927	TRUB1	70	84.426	ENSCPOG00000040236	-	81	91.878	Cavia_porcellus
ENSFCAG00000031927	TRUB1	71	79.352	ENSCPOG00000030129	-	76	91.795	Cavia_porcellus
ENSFCAG00000031927	TRUB1	96	93.433	ENSCCAG00000028842	TRUB1	95	93.433	Cebus_capucinus
ENSFCAG00000031927	TRUB1	99	92.241	ENSCATG00000033431	TRUB1	86	95.667	Cercocebus_atys
ENSFCAG00000031927	TRUB1	70	87.705	ENSCLAG00000008664	TRUB1	81	93.401	Chinchilla_lanigera
ENSFCAG00000031927	TRUB1	99	92.529	ENSCSAG00000004891	TRUB1	86	96.000	Chlorocebus_sabaeus
ENSFCAG00000031927	TRUB1	99	78.613	ENSCHOG00000011931	TRUB1	95	78.679	Choloepus_hoffmanni
ENSFCAG00000031927	TRUB1	78	80.147	ENSCPBG00000003051	TRUB1	94	80.147	Chrysemys_picta_bellii
ENSFCAG00000031927	TRUB1	99	92.529	ENSCANG00000029445	TRUB1	86	96.000	Colobus_angolensis_palliatus
ENSFCAG00000031927	TRUB1	80	80.287	ENSCGRG00001010322	-	79	80.272	Cricetulus_griseus_chok1gshd
ENSFCAG00000031927	TRUB1	72	88.142	ENSCGRG00001016772	-	90	79.730	Cricetulus_griseus_chok1gshd
ENSFCAG00000031927	TRUB1	80	89.247	ENSCGRG00000010806	Trub1	91	88.514	Cricetulus_griseus_crigri
ENSFCAG00000031927	TRUB1	73	63.281	ENSCSEG00000011261	trub1	98	57.285	Cynoglossus_semilaevis
ENSFCAG00000031927	TRUB1	70	68.571	ENSCVAG00000008791	trub1	78	67.059	Cyprinodon_variegatus
ENSFCAG00000031927	TRUB1	75	66.920	ENSDARG00000053805	trub1	90	66.920	Danio_rerio
ENSFCAG00000031927	TRUB1	97	88.166	ENSDNOG00000001069	TRUB1	95	88.623	Dasypus_novemcinctus
ENSFCAG00000031927	TRUB1	99	88.506	ENSDORG00000010431	Trub1	87	94.000	Dipodomys_ordii
ENSFCAG00000031927	TRUB1	81	77.941	ENSETEG00000009183	TRUB1	66	86.577	Echinops_telfairi
ENSFCAG00000031927	TRUB1	96	94.627	ENSEASG00005014739	TRUB1	96	94.627	Equus_asinus_asinus
ENSFCAG00000031927	TRUB1	96	94.627	ENSECAG00000007177	TRUB1	96	94.627	Equus_caballus
ENSFCAG00000031927	TRUB1	99	77.031	ENSEEUG00000013993	TRUB1	83	83.221	Erinaceus_europaeus
ENSFCAG00000031927	TRUB1	70	70.204	ENSELUG00000000502	trub1	86	70.204	Esox_lucius
ENSFCAG00000031927	TRUB1	69	77.500	ENSFALG00000002232	TRUB1	92	77.500	Ficedula_albicollis
ENSFCAG00000031927	TRUB1	70	86.885	ENSFDAG00000008140	TRUB1	95	88.793	Fukomys_damarensis
ENSFCAG00000031927	TRUB1	70	66.939	ENSFHEG00000004016	trub1	84	66.939	Fundulus_heteroclitus
ENSFCAG00000031927	TRUB1	78	75.368	ENSGALG00000009091	TRUB1	97	74.528	Gallus_gallus
ENSFCAG00000031927	TRUB1	68	65.417	ENSGAFG00000009193	trub1	89	63.529	Gambusia_affinis
ENSFCAG00000031927	TRUB1	57	67.839	ENSGACG00000015387	trub1	96	68.718	Gasterosteus_aculeatus
ENSFCAG00000031927	TRUB1	89	73.786	ENSGAGG00000009758	TRUB1	81	78.521	Gopherus_agassizii
ENSFCAG00000031927	TRUB1	99	93.103	ENSGGOG00000004583	TRUB1	96	93.731	Gorilla_gorilla
ENSFCAG00000031927	TRUB1	77	64.794	ENSHBUG00000016787	trub1	95	64.906	Haplochromis_burtoni
ENSFCAG00000031927	TRUB1	99	86.819	ENSHGLG00000015314	TRUB1	86	90.333	Heterocephalus_glaber_female
ENSFCAG00000031927	TRUB1	70	85.656	ENSHGLG00100009183	TRUB1	83	92.893	Heterocephalus_glaber_male
ENSFCAG00000031927	TRUB1	74	66.926	ENSHCOG00000017877	trub1	93	66.926	Hippocampus_comes
ENSFCAG00000031927	TRUB1	77	66.667	ENSIPUG00000017559	trub1	94	66.667	Ictalurus_punctatus
ENSFCAG00000031927	TRUB1	86	93.667	ENSSTOG00000003641	TRUB1	90	93.667	Ictidomys_tridecemlineatus
ENSFCAG00000031927	TRUB1	99	83.908	ENSJJAG00000011800	Trub1	88	90.940	Jaculus_jaculus
ENSFCAG00000031927	TRUB1	72	66.148	ENSKMAG00000006232	trub1	92	66.148	Kryptolebias_marmoratus
ENSFCAG00000031927	TRUB1	76	64.662	ENSLBEG00000026722	trub1	92	64.662	Labrus_bergylta
ENSFCAG00000031927	TRUB1	79	74.275	ENSLACG00000014885	TRUB1	92	74.275	Latimeria_chalumnae
ENSFCAG00000031927	TRUB1	79	71.480	ENSLOCG00000012979	trub1	92	72.161	Lepisosteus_oculatus
ENSFCAG00000031927	TRUB1	99	80.337	ENSLAFG00000015452	TRUB1	85	85.953	Loxodonta_africana
ENSFCAG00000031927	TRUB1	99	92.241	ENSMFAG00000031767	TRUB1	86	95.667	Macaca_fascicularis
ENSFCAG00000031927	TRUB1	99	92.529	ENSMMUG00000001902	TRUB1	86	96.000	Macaca_mulatta
ENSFCAG00000031927	TRUB1	99	88.218	ENSMNEG00000044646	TRUB1	85	91.000	Macaca_nemestrina
ENSFCAG00000031927	TRUB1	99	92.241	ENSMLEG00000042655	TRUB1	86	96.000	Mandrillus_leucophaeus
ENSFCAG00000031927	TRUB1	72	67.460	ENSMZEG00005024095	trub1	91	67.460	Maylandia_zebra
ENSFCAG00000031927	TRUB1	78	74.632	ENSMGAG00000011135	TRUB1	93	74.632	Meleagris_gallopavo
ENSFCAG00000031927	TRUB1	80	86.022	ENSMAUG00000011101	Trub1	88	85.619	Mesocricetus_auratus
ENSFCAG00000031927	TRUB1	99	94.524	ENSMICG00000016324	TRUB1	96	94.627	Microcebus_murinus
ENSFCAG00000031927	TRUB1	99	79.827	ENSMOCG00000017759	Trub1	91	87.333	Microtus_ochrogaster
ENSFCAG00000031927	TRUB1	77	85.926	ENSMODG00000009676	TRUB1	82	80.808	Monodelphis_domestica
ENSFCAG00000031927	TRUB1	99	82.421	MGP_CAROLIEiJ_G0023100	Trub1	89	86.667	Mus_caroli
ENSFCAG00000031927	TRUB1	99	81.268	ENSMUSG00000025086	Trub1	89	85.667	Mus_musculus
ENSFCAG00000031927	TRUB1	99	82.133	MGP_PahariEiJ_G0014588	Trub1	89	86.333	Mus_pahari
ENSFCAG00000031927	TRUB1	99	81.556	MGP_SPRETEiJ_G0024021	Trub1	89	86.000	Mus_spretus
ENSFCAG00000031927	TRUB1	97	95.252	ENSMPUG00000003556	TRUB1	96	95.252	Mustela_putorius_furo
ENSFCAG00000031927	TRUB1	95	88.288	ENSMLUG00000017686	TRUB1	95	87.463	Myotis_lucifugus
ENSFCAG00000031927	TRUB1	99	87.608	ENSNGAG00000018682	Trub1	86	92.667	Nannospalax_galili
ENSFCAG00000031927	TRUB1	70	68.699	ENSNBRG00000023393	trub1	88	68.699	Neolamprologus_brichardi
ENSFCAG00000031927	TRUB1	96	92.836	ENSNLEG00000016345	TRUB1	86	96.000	Nomascus_leucogenys
ENSFCAG00000031927	TRUB1	58	90.547	ENSMEUG00000006603	TRUB1	78	88.152	Notamacropus_eugenii
ENSFCAG00000031927	TRUB1	86	86.000	ENSOPRG00000009371	TRUB1	87	86.000	Ochotona_princeps
ENSFCAG00000031927	TRUB1	99	83.862	ENSODEG00000010854	TRUB1	85	88.591	Octodon_degus
ENSFCAG00000031927	TRUB1	70	67.886	ENSONIG00000007249	trub1	89	67.886	Oreochromis_niloticus
ENSFCAG00000031927	TRUB1	79	81.022	ENSOANG00000001556	TRUB1	93	78.799	Ornithorhynchus_anatinus
ENSFCAG00000031927	TRUB1	86	90.000	ENSOCUG00000009456	TRUB1	87	90.000	Oryctolagus_cuniculus
ENSFCAG00000031927	TRUB1	69	69.710	ENSORLG00000029719	trub1	91	67.194	Oryzias_latipes
ENSFCAG00000031927	TRUB1	69	69.295	ENSORLG00020016767	trub1	89	66.798	Oryzias_latipes_hni
ENSFCAG00000031927	TRUB1	69	69.295	ENSORLG00015014728	trub1	91	66.798	Oryzias_latipes_hsok
ENSFCAG00000031927	TRUB1	80	63.830	ENSOMEG00000014556	trub1	90	67.315	Oryzias_melastigma
ENSFCAG00000031927	TRUB1	99	93.966	ENSOGAG00000015895	TRUB1	96	95.224	Otolemur_garnettii
ENSFCAG00000031927	TRUB1	97	89.337	ENSOARG00000015591	TRUB1	87	93.115	Ovis_aries
ENSFCAG00000031927	TRUB1	99	93.391	ENSPPAG00000043645	TRUB1	96	93.731	Pan_paniscus
ENSFCAG00000031927	TRUB1	100	98.854	ENSPPRG00000007096	TRUB1	100	98.854	Panthera_pardus
ENSFCAG00000031927	TRUB1	100	99.140	ENSPTIG00000006378	TRUB1	100	99.140	Panthera_tigris_altaica
ENSFCAG00000031927	TRUB1	99	93.391	ENSPTRG00000002964	TRUB1	96	93.731	Pan_troglodytes
ENSFCAG00000031927	TRUB1	99	92.529	ENSPANG00000020712	TRUB1	96	93.134	Papio_anubis
ENSFCAG00000031927	TRUB1	78	77.941	ENSPSIG00000012877	TRUB1	93	77.941	Pelodiscus_sinensis
ENSFCAG00000031927	TRUB1	70	66.122	ENSPMGG00000000075	trub1	88	66.122	Periophthalmus_magnuspinnatus
ENSFCAG00000031927	TRUB1	99	78.386	ENSPEMG00000011156	Trub1	88	85.619	Peromyscus_maniculatus_bairdii
ENSFCAG00000031927	TRUB1	82	81.533	ENSPCIG00000009729	TRUB1	81	80.135	Phascolarctos_cinereus
ENSFCAG00000031927	TRUB1	70	66.531	ENSPFOG00000009950	trub1	90	66.531	Poecilia_formosa
ENSFCAG00000031927	TRUB1	70	66.531	ENSPLAG00000013855	trub1	86	66.531	Poecilia_latipinna
ENSFCAG00000031927	TRUB1	70	66.531	ENSPMEG00000009064	trub1	88	66.531	Poecilia_mexicana
ENSFCAG00000031927	TRUB1	70	67.347	ENSPREG00000003343	trub1	88	67.347	Poecilia_reticulata
ENSFCAG00000031927	TRUB1	96	93.134	ENSPPYG00000002676	TRUB1	96	93.134	Pongo_abelii
ENSFCAG00000031927	TRUB1	99	74.929	ENSPCAG00000008427	TRUB1	85	79.264	Procavia_capensis
ENSFCAG00000031927	TRUB1	99	88.761	ENSPCOG00000024360	TRUB1	85	91.000	Propithecus_coquereli
ENSFCAG00000031927	TRUB1	75	94.677	ENSPVAG00000007575	TRUB1	95	94.821	Pteropus_vampyrus
ENSFCAG00000031927	TRUB1	72	67.460	ENSPNYG00000018614	trub1	91	67.460	Pundamilia_nyererei
ENSFCAG00000031927	TRUB1	74	60.000	ENSPNAG00000006881	trub1	84	60.000	Pygocentrus_nattereri
ENSFCAG00000031927	TRUB1	99	82.709	ENSRNOG00000017321	Trub1	88	86.667	Rattus_norvegicus
ENSFCAG00000031927	TRUB1	99	82.471	ENSRBIG00000033423	TRUB1	85	84.667	Rhinopithecus_bieti
ENSFCAG00000031927	TRUB1	99	92.241	ENSRROG00000033902	TRUB1	86	96.000	Rhinopithecus_roxellana
ENSFCAG00000031927	TRUB1	96	93.433	ENSSBOG00000024237	TRUB1	85	96.000	Saimiri_boliviensis_boliviensis
ENSFCAG00000031927	TRUB1	73	80.156	ENSSHAG00000009346	TRUB1	86	80.156	Sarcophilus_harrisii
ENSFCAG00000031927	TRUB1	70	70.782	ENSSFOG00015022124	trub1	87	68.504	Scleropages_formosus
ENSFCAG00000031927	TRUB1	70	69.106	ENSSMAG00000001020	trub1	88	69.106	Scophthalmus_maximus
ENSFCAG00000031927	TRUB1	69	69.583	ENSSDUG00000016414	trub1	92	67.315	Seriola_dumerili
ENSFCAG00000031927	TRUB1	69	70.000	ENSSLDG00000015486	trub1	92	67.704	Seriola_lalandi_dorsalis
ENSFCAG00000031927	TRUB1	78	80.147	ENSSPUG00000001642	TRUB1	93	80.147	Sphenodon_punctatus
ENSFCAG00000031927	TRUB1	75	66.920	ENSSPAG00000001217	trub1	94	66.920	Stegastes_partitus
ENSFCAG00000031927	TRUB1	99	89.368	ENSSSCG00000010653	TRUB1	96	89.851	Sus_scrofa
ENSFCAG00000031927	TRUB1	77	77.037	ENSTGUG00000010971	TRUB1	100	75.801	Taeniopygia_guttata
ENSFCAG00000031927	TRUB1	73	77.165	ENSTBEG00000002880	TRUB1	100	77.165	Tupaia_belangeri
ENSFCAG00000031927	TRUB1	62	95.833	ENSTTRG00000005767	TRUB1	82	95.833	Tursiops_truncatus
ENSFCAG00000031927	TRUB1	100	96.286	ENSUAMG00000024876	TRUB1	100	96.286	Ursus_americanus
ENSFCAG00000031927	TRUB1	97	89.021	ENSUMAG00000002411	TRUB1	96	91.988	Ursus_maritimus
ENSFCAG00000031927	TRUB1	99	93.678	ENSVPAG00000005507	TRUB1	96	94.030	Vicugna_pacos
ENSFCAG00000031927	TRUB1	99	93.103	ENSVVUG00000010085	TRUB1	80	94.328	Vulpes_vulpes
ENSFCAG00000031927	TRUB1	78	67.279	ENSXETG00000023828	trub1	98	67.279	Xenopus_tropicalis
ENSFCAG00000031927	TRUB1	68	66.109	ENSXCOG00000017847	trub1	86	65.432	Xiphophorus_couchianus
ENSFCAG00000031927	TRUB1	70	65.714	ENSXMAG00000014701	trub1	88	65.714	Xiphophorus_maculatus