EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000032033 (Gene tree)
Gene ID: 101089523
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 29241 bases
Position: chrB3:86601290-86630530
Accession: 101089523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000017248	SRP54	PF00448.22	4.7e-78	1	1
ENSFCAP00000017248	SRP54_N	PF02881.19	2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000023128	SRP54-201	2965	XM_003987537	ENSFCAP00000017248	504 (aa)	XP_003987586	M3WSB2

Gene Model

Click here to download ENSFCAG00000032033's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000032033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000032033	SRP54	100	99.802	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSFCAG00000032033	SRP54	100	95.635	ENSAPOG00000011314	srp54	100	95.635	Acanthochromis_polyacanthus
ENSFCAG00000032033	SRP54	100	99.802	ENSAMEG00000015544	SRP54	100	99.802	Ailuropoda_melanoleuca
ENSFCAG00000032033	SRP54	89	94.878	ENSACIG00000022831	srp54	97	94.878	Amphilophus_citrinellus
ENSFCAG00000032033	SRP54	100	95.635	ENSAOCG00000019401	srp54	100	95.635	Amphiprion_ocellaris
ENSFCAG00000032033	SRP54	100	95.635	ENSAPEG00000001977	srp54	100	95.635	Amphiprion_percula
ENSFCAG00000032033	SRP54	100	96.032	ENSATEG00000013877	srp54	100	96.032	Anabas_testudineus
ENSFCAG00000032033	SRP54	94	98.523	ENSAPLG00000010125	SRP54	95	98.523	Anas_platyrhynchos
ENSFCAG00000032033	SRP54	86	95.392	ENSACAG00000010631	-	100	95.392	Anolis_carolinensis
ENSFCAG00000032033	SRP54	100	98.413	ENSACAG00000002103	-	100	98.413	Anolis_carolinensis
ENSFCAG00000032033	SRP54	65	81.873	ENSACAG00000001124	-	100	81.873	Anolis_carolinensis
ENSFCAG00000032033	SRP54	100	99.802	ENSANAG00000022133	SRP54	100	99.802	Aotus_nancymaae
ENSFCAG00000032033	SRP54	100	95.833	ENSACLG00000015866	srp54	100	95.833	Astatotilapia_calliptera
ENSFCAG00000032033	SRP54	100	95.833	ENSAMXG00000032669	SRP54	100	95.833	Astyanax_mexicanus
ENSFCAG00000032033	SRP54	100	99.802	ENSBTAG00000019085	SRP54	100	99.802	Bos_taurus
ENSFCAG00000032033	SRP54	98	71.486	WBGene00009012	F21D5.7	100	71.486	Caenorhabditis_elegans
ENSFCAG00000032033	SRP54	100	99.802	ENSCJAG00000006581	SRP54	100	99.802	Callithrix_jacchus
ENSFCAG00000032033	SRP54	100	99.802	ENSCAFG00000013331	SRP54	100	99.802	Canis_familiaris
ENSFCAG00000032033	SRP54	100	99.802	ENSCAFG00020023427	SRP54	100	99.802	Canis_lupus_dingo
ENSFCAG00000032033	SRP54	100	99.802	ENSCHIG00000026345	SRP54	100	99.802	Capra_hircus
ENSFCAG00000032033	SRP54	94	88.421	ENSTSYG00000035333	-	93	88.421	Carlito_syrichta
ENSFCAG00000032033	SRP54	100	99.603	ENSTSYG00000002680	-	100	99.603	Carlito_syrichta
ENSFCAG00000032033	SRP54	94	64.082	ENSCAPG00000008780	SRP54	100	64.082	Cavia_aperea
ENSFCAG00000032033	SRP54	100	99.405	ENSCPOG00000003691	SRP54	100	99.405	Cavia_porcellus
ENSFCAG00000032033	SRP54	90	99.524	ENSCCAG00000024179	SRP54	100	99.761	Cebus_capucinus
ENSFCAG00000032033	SRP54	100	99.802	ENSCATG00000034083	SRP54	100	99.802	Cercocebus_atys
ENSFCAG00000032033	SRP54	100	99.802	ENSCLAG00000015076	SRP54	100	99.802	Chinchilla_lanigera
ENSFCAG00000032033	SRP54	100	99.802	ENSCSAG00000015575	SRP54	100	99.802	Chlorocebus_sabaeus
ENSFCAG00000032033	SRP54	95	87.942	ENSCHOG00000008986	SRP54	100	87.942	Choloepus_hoffmanni
ENSFCAG00000032033	SRP54	100	99.008	ENSCPBG00000026195	SRP54	100	99.008	Chrysemys_picta_bellii
ENSFCAG00000032033	SRP54	100	81.548	ENSCING00000007380	-	100	81.548	Ciona_intestinalis
ENSFCAG00000032033	SRP54	100	99.802	ENSCANG00000028532	SRP54	100	99.802	Colobus_angolensis_palliatus
ENSFCAG00000032033	SRP54	100	99.802	ENSCGRG00001009525	-	100	99.802	Cricetulus_griseus_chok1gshd
ENSFCAG00000032033	SRP54	76	99.740	ENSCGRG00000009453	-	89	99.740	Cricetulus_griseus_crigri
ENSFCAG00000032033	SRP54	100	94.841	ENSCSEG00000012392	srp54	100	94.841	Cynoglossus_semilaevis
ENSFCAG00000032033	SRP54	100	95.635	ENSCVAG00000010395	srp54	100	95.635	Cyprinodon_variegatus
ENSFCAG00000032033	SRP54	100	95.833	ENSDARG00000098367	srp54	100	95.833	Danio_rerio
ENSFCAG00000032033	SRP54	100	99.802	ENSDNOG00000032525	SRP54	100	99.802	Dasypus_novemcinctus
ENSFCAG00000032033	SRP54	89	85.268	ENSDORG00000005159	-	97	85.268	Dipodomys_ordii
ENSFCAG00000032033	SRP54	96	77.732	FBgn0010747	Srp54k	98	77.309	Drosophila_melanogaster
ENSFCAG00000032033	SRP54	100	99.008	ENSETEG00000016307	-	100	99.008	Echinops_telfairi
ENSFCAG00000032033	SRP54	83	58.134	ENSETEG00000012102	-	99	58.134	Echinops_telfairi
ENSFCAG00000032033	SRP54	100	87.698	ENSEBUG00000009437	-	100	87.698	Eptatretus_burgeri
ENSFCAG00000032033	SRP54	100	99.802	ENSEASG00005002057	SRP54	100	99.802	Equus_asinus_asinus
ENSFCAG00000032033	SRP54	99	99.598	ENSECAG00000018042	SRP54	98	99.598	Equus_caballus
ENSFCAG00000032033	SRP54	100	83.135	ENSEEUG00000001511	SRP54	100	83.135	Erinaceus_europaeus
ENSFCAG00000032033	SRP54	100	95.040	ENSELUG00000003395	srp54	100	95.040	Esox_lucius
ENSFCAG00000032033	SRP54	100	98.611	ENSFALG00000005995	SRP54	100	98.611	Ficedula_albicollis
ENSFCAG00000032033	SRP54	100	99.802	ENSFDAG00000016767	SRP54	100	99.802	Fukomys_damarensis
ENSFCAG00000032033	SRP54	100	95.238	ENSFHEG00000004263	srp54	100	95.238	Fundulus_heteroclitus
ENSFCAG00000032033	SRP54	95	89.958	ENSGMOG00000011391	srp54	100	89.958	Gadus_morhua
ENSFCAG00000032033	SRP54	100	98.611	ENSGALG00000023135	SRP54	100	98.611	Gallus_gallus
ENSFCAG00000032033	SRP54	100	95.833	ENSGAFG00000011586	srp54	100	95.833	Gambusia_affinis
ENSFCAG00000032033	SRP54	100	95.238	ENSGACG00000004181	srp54	100	95.238	Gasterosteus_aculeatus
ENSFCAG00000032033	SRP54	100	99.008	ENSGAGG00000014766	SRP54	100	99.008	Gopherus_agassizii
ENSFCAG00000032033	SRP54	100	99.802	ENSGGOG00000002926	SRP54	100	99.802	Gorilla_gorilla
ENSFCAG00000032033	SRP54	100	95.833	ENSHBUG00000005678	srp54	100	95.833	Haplochromis_burtoni
ENSFCAG00000032033	SRP54	100	99.802	ENSHGLG00000002850	SRP54	100	99.802	Heterocephalus_glaber_female
ENSFCAG00000032033	SRP54	100	99.802	ENSHGLG00100005263	SRP54	100	99.802	Heterocephalus_glaber_male
ENSFCAG00000032033	SRP54	100	68.911	ENSHGLG00100007281	-	100	68.911	Heterocephalus_glaber_male
ENSFCAG00000032033	SRP54	100	94.246	ENSHCOG00000021127	srp54	100	94.246	Hippocampus_comes
ENSFCAG00000032033	SRP54	100	95.040	ENSIPUG00000001420	srp54	100	95.040	Ictalurus_punctatus
ENSFCAG00000032033	SRP54	100	99.802	ENSSTOG00000016023	SRP54	100	99.802	Ictidomys_tridecemlineatus
ENSFCAG00000032033	SRP54	100	95.040	ENSJJAG00000013417	-	100	95.040	Jaculus_jaculus
ENSFCAG00000032033	SRP54	87	76.818	ENSJJAG00000016404	-	100	76.818	Jaculus_jaculus
ENSFCAG00000032033	SRP54	100	95.238	ENSKMAG00000007707	srp54	100	95.238	Kryptolebias_marmoratus
ENSFCAG00000032033	SRP54	100	95.635	ENSLBEG00000018690	srp54	100	95.635	Labrus_bergylta
ENSFCAG00000032033	SRP54	100	95.635	ENSLBEG00000021122	srp54	100	95.635	Labrus_bergylta
ENSFCAG00000032033	SRP54	100	95.833	ENSLACG00000017890	SRP54	100	95.833	Latimeria_chalumnae
ENSFCAG00000032033	SRP54	100	96.627	ENSLOCG00000009440	srp54	100	96.627	Lepisosteus_oculatus
ENSFCAG00000032033	SRP54	100	99.802	ENSLAFG00000012007	SRP54	100	99.802	Loxodonta_africana
ENSFCAG00000032033	SRP54	100	99.802	ENSMFAG00000044371	SRP54	100	99.802	Macaca_fascicularis
ENSFCAG00000032033	SRP54	100	99.802	ENSMMUG00000015073	FAM177A1	100	99.802	Macaca_mulatta
ENSFCAG00000032033	SRP54	100	99.802	ENSMNEG00000006947	SRP54	100	99.802	Macaca_nemestrina
ENSFCAG00000032033	SRP54	100	99.802	ENSMLEG00000042251	SRP54	100	99.802	Mandrillus_leucophaeus
ENSFCAG00000032033	SRP54	100	95.833	ENSMAMG00000004803	srp54	100	95.833	Mastacembelus_armatus
ENSFCAG00000032033	SRP54	100	95.833	ENSMZEG00005027528	srp54	100	95.833	Maylandia_zebra
ENSFCAG00000032033	SRP54	100	93.874	ENSMGAG00000012481	SRP54	100	93.874	Meleagris_gallopavo
ENSFCAG00000032033	SRP54	100	99.603	ENSMAUG00000014447	-	100	99.603	Mesocricetus_auratus
ENSFCAG00000032033	SRP54	100	99.802	ENSMICG00000010270	SRP54	100	99.802	Microcebus_murinus
ENSFCAG00000032033	SRP54	87	99.545	ENSMOCG00000000948	-	100	99.545	Microtus_ochrogaster
ENSFCAG00000032033	SRP54	89	93.960	ENSMMOG00000020303	srp54	98	93.960	Mola_mola
ENSFCAG00000032033	SRP54	100	99.603	ENSMODG00000012925	-	100	99.603	Monodelphis_domestica
ENSFCAG00000032033	SRP54	100	99.603	ENSMODG00000023150	-	100	99.603	Monodelphis_domestica
ENSFCAG00000032033	SRP54	89	94.420	ENSMALG00000009163	srp54	99	94.420	Monopterus_albus
ENSFCAG00000032033	SRP54	100	99.603	MGP_CAROLIEiJ_G0017754	-	100	99.603	Mus_caroli
ENSFCAG00000032033	SRP54	100	99.603	ENSMUSG00000112449	Srp54b	100	99.603	Mus_musculus
ENSFCAG00000032033	SRP54	100	99.603	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSFCAG00000032033	SRP54	100	98.810	ENSMUSG00000079108	Srp54c	100	98.810	Mus_musculus
ENSFCAG00000032033	SRP54	100	99.603	MGP_PahariEiJ_G0029510	-	100	99.603	Mus_pahari
ENSFCAG00000032033	SRP54	100	99.802	ENSMPUG00000016302	SRP54	100	99.802	Mustela_putorius_furo
ENSFCAG00000032033	SRP54	100	99.206	ENSMLUG00000008958	SRP54	100	99.206	Myotis_lucifugus
ENSFCAG00000032033	SRP54	100	89.881	ENSNGAG00000019806	-	100	89.881	Nannospalax_galili
ENSFCAG00000032033	SRP54	87	95.455	ENSNBRG00000006000	srp54	100	95.455	Neolamprologus_brichardi
ENSFCAG00000032033	SRP54	100	99.802	ENSNLEG00000003496	SRP54	100	99.802	Nomascus_leucogenys
ENSFCAG00000032033	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSFCAG00000032033	SRP54	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSFCAG00000032033	SRP54	100	99.802	ENSODEG00000004865	SRP54	100	99.802	Octodon_degus
ENSFCAG00000032033	SRP54	100	95.833	ENSONIG00000011768	srp54	100	95.833	Oreochromis_niloticus
ENSFCAG00000032033	SRP54	100	99.802	ENSOANG00000014051	SRP54	100	99.802	Ornithorhynchus_anatinus
ENSFCAG00000032033	SRP54	100	99.206	ENSOCUG00000007838	SRP54	100	99.206	Oryctolagus_cuniculus
ENSFCAG00000032033	SRP54	100	95.635	ENSORLG00000010027	srp54	100	95.635	Oryzias_latipes
ENSFCAG00000032033	SRP54	100	95.635	ENSORLG00020001878	srp54	100	95.635	Oryzias_latipes_hni
ENSFCAG00000032033	SRP54	100	95.635	ENSORLG00015021866	srp54	100	95.635	Oryzias_latipes_hsok
ENSFCAG00000032033	SRP54	100	95.833	ENSOMEG00000020952	srp54	100	95.833	Oryzias_melastigma
ENSFCAG00000032033	SRP54	100	99.802	ENSOGAG00000012188	SRP54	100	99.802	Otolemur_garnettii
ENSFCAG00000032033	SRP54	100	99.802	ENSOARG00000007160	SRP54	100	99.802	Ovis_aries
ENSFCAG00000032033	SRP54	100	99.802	ENSPPAG00000017434	SRP54	100	99.802	Pan_paniscus
ENSFCAG00000032033	SRP54	100	99.008	ENSPPRG00000014047	SRP54	100	99.008	Panthera_pardus
ENSFCAG00000032033	SRP54	100	100.000	ENSPTIG00000000744	SRP54	96	100.000	Panthera_tigris_altaica
ENSFCAG00000032033	SRP54	100	99.802	ENSPTRG00000006259	FAM177A1	100	99.802	Pan_troglodytes
ENSFCAG00000032033	SRP54	100	99.802	ENSPANG00000023853	SRP54	100	99.802	Papio_anubis
ENSFCAG00000032033	SRP54	100	95.437	ENSPKIG00000001953	srp54	100	95.437	Paramormyrops_kingsleyae
ENSFCAG00000032033	SRP54	100	98.810	ENSPSIG00000006476	SRP54	100	98.810	Pelodiscus_sinensis
ENSFCAG00000032033	SRP54	91	92.826	ENSPMGG00000004127	srp54	99	92.826	Periophthalmus_magnuspinnatus
ENSFCAG00000032033	SRP54	100	86.706	ENSPEMG00000019634	-	100	86.706	Peromyscus_maniculatus_bairdii
ENSFCAG00000032033	SRP54	100	88.889	ENSPMAG00000006078	-	100	88.889	Petromyzon_marinus
ENSFCAG00000032033	SRP54	100	99.603	ENSPCIG00000016175	SRP54	100	99.603	Phascolarctos_cinereus
ENSFCAG00000032033	SRP54	100	95.833	ENSPFOG00000008870	srp54	100	95.833	Poecilia_formosa
ENSFCAG00000032033	SRP54	100	95.833	ENSPLAG00000009889	srp54	100	95.833	Poecilia_latipinna
ENSFCAG00000032033	SRP54	100	95.833	ENSPMEG00000008601	srp54	100	95.833	Poecilia_mexicana
ENSFCAG00000032033	SRP54	100	95.833	ENSPREG00000004505	srp54	100	95.833	Poecilia_reticulata
ENSFCAG00000032033	SRP54	100	94.643	ENSPPYG00000005739	SRP54	100	94.643	Pongo_abelii
ENSFCAG00000032033	SRP54	100	95.833	ENSPCAG00000006268	SRP54	100	95.833	Procavia_capensis
ENSFCAG00000032033	SRP54	100	97.822	ENSPCOG00000022473	SRP54	100	97.822	Propithecus_coquereli
ENSFCAG00000032033	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSFCAG00000032033	SRP54	100	95.833	ENSPNYG00000009717	srp54	100	95.833	Pundamilia_nyererei
ENSFCAG00000032033	SRP54	100	95.635	ENSPNAG00000008544	srp54	100	95.635	Pygocentrus_nattereri
ENSFCAG00000032033	SRP54	100	99.405	ENSRNOG00000032776	Srp54a	100	99.405	Rattus_norvegicus
ENSFCAG00000032033	SRP54	100	99.802	ENSRROG00000041292	SRP54	100	99.802	Rhinopithecus_roxellana
ENSFCAG00000032033	SRP54	86	53.061	YPR088C	SRP54	95	48.276	Saccharomyces_cerevisiae
ENSFCAG00000032033	SRP54	94	99.789	ENSSBOG00000035145	SRP54	100	99.789	Saimiri_boliviensis_boliviensis
ENSFCAG00000032033	SRP54	68	99.708	ENSSHAG00000000671	SRP54	100	99.708	Sarcophilus_harrisii
ENSFCAG00000032033	SRP54	100	96.032	ENSSFOG00015013920	srp54	100	96.032	Scleropages_formosus
ENSFCAG00000032033	SRP54	100	89.700	ENSSMAG00000002441	srp54	100	89.700	Scophthalmus_maximus
ENSFCAG00000032033	SRP54	100	95.833	ENSSDUG00000018586	srp54	100	95.833	Seriola_dumerili
ENSFCAG00000032033	SRP54	100	95.635	ENSSLDG00000010476	srp54	100	95.635	Seriola_lalandi_dorsalis
ENSFCAG00000032033	SRP54	100	99.802	ENSSARG00000002744	SRP54	100	99.802	Sorex_araneus
ENSFCAG00000032033	SRP54	100	99.008	ENSSPUG00000013101	SRP54	100	99.008	Sphenodon_punctatus
ENSFCAG00000032033	SRP54	100	95.635	ENSSPAG00000002354	srp54	100	95.635	Stegastes_partitus
ENSFCAG00000032033	SRP54	100	99.802	ENSSSCG00000001955	SRP54	100	99.802	Sus_scrofa
ENSFCAG00000032033	SRP54	94	98.523	ENSTGUG00000011945	-	95	98.523	Taeniopygia_guttata
ENSFCAG00000032033	SRP54	100	95.238	ENSTRUG00000007057	srp54	100	95.238	Takifugu_rubripes
ENSFCAG00000032033	SRP54	100	94.841	ENSTNIG00000002589	srp54	100	94.841	Tetraodon_nigroviridis
ENSFCAG00000032033	SRP54	89	91.275	ENSTBEG00000011409	SRP54	100	91.275	Tupaia_belangeri
ENSFCAG00000032033	SRP54	100	89.881	ENSTTRG00000000928	SRP54	100	89.881	Tursiops_truncatus
ENSFCAG00000032033	SRP54	52	99.618	ENSUAMG00000012385	SRP54	100	99.618	Ursus_americanus
ENSFCAG00000032033	SRP54	100	99.802	ENSUMAG00000011234	SRP54	100	99.802	Ursus_maritimus
ENSFCAG00000032033	SRP54	94	99.578	ENSVPAG00000005668	SRP54	100	99.578	Vicugna_pacos
ENSFCAG00000032033	SRP54	100	99.802	ENSVVUG00000019962	SRP54	100	99.802	Vulpes_vulpes
ENSFCAG00000032033	SRP54	100	82.051	ENSXETG00000012290	srp54	100	82.051	Xenopus_tropicalis
ENSFCAG00000032033	SRP54	88	95.711	ENSXCOG00000004658	srp54	96	95.711	Xiphophorus_couchianus
ENSFCAG00000032033	SRP54	100	95.833	ENSXMAG00000018315	srp54	100	95.833	Xiphophorus_maculatus