EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000032814 (Gene tree)
Gene ID: 101091686
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 6555 bases
Position: chrA3:17168274-17174828
Accession: 101091686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000026050	RRM_1	PF00076.22	8.4e-33	1	2
ENSFCAP00000026050	RRM_1	PF00076.22	8.4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000034867	SRSF6-201	4259	XM_023251231	ENSFCAP00000026050	344 (aa)	XP_023106999	A0A2I2U0U0

Gene Model

Click here to download ENSFCAG00000032814's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03040	Spliceosome	KEGG
fca05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000032814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000032814	SRSF6	52	65.922	ENSFCAG00000008848	SRSF5	87	62.097
ENSFCAG00000032814	SRSF6	58	41.148	ENSFCAG00000002250	-	82	43.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000032814	SRSF6	100	97.399	ENSG00000124193	SRSF6	100	97.399	Homo_sapiens
ENSFCAG00000032814	SRSF6	94	88.272	ENSAMEG00000003710	SRSF6	94	88.272	Ailuropoda_melanoleuca
ENSFCAG00000032814	SRSF6	76	67.925	ENSACIG00000020091	-	95	81.102	Amphilophus_citrinellus
ENSFCAG00000032814	SRSF6	53	85.792	ENSAOCG00000004309	-	57	83.696	Amphiprion_ocellaris
ENSFCAG00000032814	SRSF6	54	82.632	ENSAPEG00000020746	-	66	80.319	Amphiprion_percula
ENSFCAG00000032814	SRSF6	53	88.649	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSFCAG00000032814	SRSF6	53	81.622	ENSATEG00000007255	-	71	80.541	Anabas_testudineus
ENSFCAG00000032814	SRSF6	94	80.000	ENSACAG00000002061	SRSF6	92	83.230	Anolis_carolinensis
ENSFCAG00000032814	SRSF6	100	96.532	ENSANAG00000024080	SRSF6	100	96.532	Aotus_nancymaae
ENSFCAG00000032814	SRSF6	53	83.333	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSFCAG00000032814	SRSF6	53	86.559	ENSAMXG00000003101	-	51	84.737	Astyanax_mexicanus
ENSFCAG00000032814	SRSF6	100	99.130	ENSBTAG00000008527	SRSF6	100	99.130	Bos_taurus
ENSFCAG00000032814	SRSF6	78	98.127	ENSCJAG00000048403	SRSF6	99	98.127	Callithrix_jacchus
ENSFCAG00000032814	SRSF6	100	100.000	ENSCAFG00000009289	SRSF6	100	100.000	Canis_familiaris
ENSFCAG00000032814	SRSF6	100	100.000	ENSCAFG00020013559	SRSF6	100	100.000	Canis_lupus_dingo
ENSFCAG00000032814	SRSF6	100	99.710	ENSCHIG00000015890	-	100	99.710	Capra_hircus
ENSFCAG00000032814	SRSF6	100	99.130	ENSCHIG00000009148	-	100	99.130	Capra_hircus
ENSFCAG00000032814	SRSF6	100	83.188	ENSTSYG00000026476	SRSF6	100	83.188	Carlito_syrichta
ENSFCAG00000032814	SRSF6	94	79.630	ENSCPOG00000011761	SRSF6	70	93.182	Cavia_porcellus
ENSFCAG00000032814	SRSF6	100	96.821	ENSCCAG00000026018	-	100	96.821	Cebus_capucinus
ENSFCAG00000032814	SRSF6	54	86.559	ENSCCAG00000018540	-	62	86.702	Cebus_capucinus
ENSFCAG00000032814	SRSF6	100	97.391	ENSCATG00000030794	SRSF6	100	97.391	Cercocebus_atys
ENSFCAG00000032814	SRSF6	94	96.605	ENSCLAG00000010247	SRSF6	94	96.605	Chinchilla_lanigera
ENSFCAG00000032814	SRSF6	100	97.391	ENSCSAG00000014022	SRSF6	100	97.391	Chlorocebus_sabaeus
ENSFCAG00000032814	SRSF6	100	82.609	ENSCHOG00000000561	SRSF6	100	82.609	Choloepus_hoffmanni
ENSFCAG00000032814	SRSF6	54	91.489	ENSCPBG00000018200	SRSF6	94	84.969	Chrysemys_picta_bellii
ENSFCAG00000032814	SRSF6	100	97.101	ENSCANG00000037774	-	100	97.101	Colobus_angolensis_palliatus
ENSFCAG00000032814	SRSF6	100	82.899	ENSCANG00000042529	-	100	82.899	Colobus_angolensis_palliatus
ENSFCAG00000032814	SRSF6	99	96.460	ENSCGRG00001022339	Srsf6	99	96.460	Cricetulus_griseus_chok1gshd
ENSFCAG00000032814	SRSF6	63	94.419	ENSCGRG00000006618	Srsf6	100	94.419	Cricetulus_griseus_crigri
ENSFCAG00000032814	SRSF6	53	83.957	ENSDARG00000016783	srsf6b	82	92.308	Danio_rerio
ENSFCAG00000032814	SRSF6	94	95.988	ENSDNOG00000008410	SRSF6	94	95.988	Dasypus_novemcinctus
ENSFCAG00000032814	SRSF6	100	96.812	ENSDORG00000028378	Srsf6	100	96.812	Dipodomys_ordii
ENSFCAG00000032814	SRSF6	93	93.438	ENSETEG00000006221	SRSF6	94	91.049	Echinops_telfairi
ENSFCAG00000032814	SRSF6	100	98.841	ENSEASG00005023429	SRSF6	100	98.841	Equus_asinus_asinus
ENSFCAG00000032814	SRSF6	100	98.841	ENSECAG00000023932	SRSF6	100	98.841	Equus_caballus
ENSFCAG00000032814	SRSF6	56	94.872	ENSEEUG00000002324	SRSF6	90	94.924	Erinaceus_europaeus
ENSFCAG00000032814	SRSF6	88	66.340	ENSELUG00000024182	SRSF6	76	92.308	Esox_lucius
ENSFCAG00000032814	SRSF6	92	63.323	ENSELUG00000013506	SRSF6	70	89.744	Esox_lucius
ENSFCAG00000032814	SRSF6	94	80.556	ENSFDAG00000012191	SRSF6	93	78.086	Fukomys_damarensis
ENSFCAG00000032814	SRSF6	87	70.957	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSFCAG00000032814	SRSF6	53	82.320	ENSGMOG00000014458	srsf6a	52	77.604	Gadus_morhua
ENSFCAG00000032814	SRSF6	71	61.633	ENSGMOG00000006105	srsf6a	62	70.950	Gadus_morhua
ENSFCAG00000032814	SRSF6	93	82.875	ENSGALG00000000990	SRSF6	94	69.091	Gallus_gallus
ENSFCAG00000032814	SRSF6	87	59.347	ENSGACG00000006084	srsf6a	61	76.744	Gasterosteus_aculeatus
ENSFCAG00000032814	SRSF6	54	91.489	ENSGAGG00000003238	SRSF6	94	84.969	Gopherus_agassizii
ENSFCAG00000032814	SRSF6	100	97.399	ENSGGOG00000009808	SRSF6	100	97.399	Gorilla_gorilla
ENSFCAG00000032814	SRSF6	63	74.123	ENSHBUG00000006386	-	58	84.239	Haplochromis_burtoni
ENSFCAG00000032814	SRSF6	90	76.206	ENSHGLG00000007701	-	58	78.075	Heterocephalus_glaber_female
ENSFCAG00000032814	SRSF6	94	96.605	ENSHGLG00000007348	SRSF6	94	96.605	Heterocephalus_glaber_female
ENSFCAG00000032814	SRSF6	94	80.864	ENSHGLG00100005043	SRSF6	93	78.395	Heterocephalus_glaber_male
ENSFCAG00000032814	SRSF6	53	82.514	ENSHCOG00000002740	srsf6a	57	82.065	Hippocampus_comes
ENSFCAG00000032814	SRSF6	53	86.957	ENSIPUG00000004776	-	76	68.033	Ictalurus_punctatus
ENSFCAG00000032814	SRSF6	100	96.232	ENSSTOG00000010866	SRSF6	100	96.232	Ictidomys_tridecemlineatus
ENSFCAG00000032814	SRSF6	87	66.000	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSFCAG00000032814	SRSF6	53	84.783	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSFCAG00000032814	SRSF6	90	81.731	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSFCAG00000032814	SRSF6	69	96.234	ENSLAFG00000006682	SRSF6	89	96.507	Loxodonta_africana
ENSFCAG00000032814	SRSF6	100	97.391	ENSMFAG00000036925	SRSF6	100	97.391	Macaca_fascicularis
ENSFCAG00000032814	SRSF6	100	97.391	ENSMMUG00000006742	SRSF6	100	97.391	Macaca_mulatta
ENSFCAG00000032814	SRSF6	100	95.942	ENSMNEG00000038270	-	100	95.942	Macaca_nemestrina
ENSFCAG00000032814	SRSF6	100	96.812	ENSMNEG00000027392	-	100	96.812	Macaca_nemestrina
ENSFCAG00000032814	SRSF6	63	96.759	ENSMLEG00000031524	SRSF6	100	96.759	Mandrillus_leucophaeus
ENSFCAG00000032814	SRSF6	53	88.108	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSFCAG00000032814	SRSF6	63	72.294	ENSMZEG00005008032	-	57	84.239	Maylandia_zebra
ENSFCAG00000032814	SRSF6	53	83.978	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSFCAG00000032814	SRSF6	100	97.971	ENSMICG00000008537	SRSF6	100	97.971	Microcebus_murinus
ENSFCAG00000032814	SRSF6	63	94.419	ENSMOCG00000018738	Srsf6	100	94.419	Microtus_ochrogaster
ENSFCAG00000032814	SRSF6	54	94.624	ENSMODG00000003107	SRSF6	55	95.745	Monodelphis_domestica
ENSFCAG00000032814	SRSF6	94	96.285	MGP_CAROLIEiJ_G0024606	Srsf6	95	96.285	Mus_caroli
ENSFCAG00000032814	SRSF6	94	96.285	ENSMUSG00000016921	Srsf6	95	96.605	Mus_musculus
ENSFCAG00000032814	SRSF6	99	96.165	MGP_PahariEiJ_G0026050	Srsf6	99	96.165	Mus_pahari
ENSFCAG00000032814	SRSF6	94	96.285	MGP_SPRETEiJ_G0025528	Srsf6	95	96.605	Mus_spretus
ENSFCAG00000032814	SRSF6	83	100.000	ENSMPUG00000017692	SRSF6	99	100.000	Mustela_putorius_furo
ENSFCAG00000032814	SRSF6	93	82.609	ENSMLUG00000016618	SRSF6	94	82.716	Myotis_lucifugus
ENSFCAG00000032814	SRSF6	99	95.000	ENSNGAG00000017560	Srsf6	99	95.000	Nannospalax_galili
ENSFCAG00000032814	SRSF6	100	97.399	ENSNLEG00000006524	SRSF6	100	97.399	Nomascus_leucogenys
ENSFCAG00000032814	SRSF6	54	94.624	ENSMEUG00000014615	SRSF6	62	95.745	Notamacropus_eugenii
ENSFCAG00000032814	SRSF6	75	96.911	ENSOPRG00000002017	-	100	96.911	Ochotona_princeps
ENSFCAG00000032814	SRSF6	53	84.699	ENSONIG00000020247	-	53	84.783	Oreochromis_niloticus
ENSFCAG00000032814	SRSF6	53	85.792	ENSONIG00000001925	-	54	71.795	Oreochromis_niloticus
ENSFCAG00000032814	SRSF6	84	80.719	ENSOCUG00000009785	-	64	76.289	Oryctolagus_cuniculus
ENSFCAG00000032814	SRSF6	67	51.092	ENSOCUG00000023999	-	70	62.570	Oryctolagus_cuniculus
ENSFCAG00000032814	SRSF6	94	97.222	ENSOGAG00000014468	SRSF6	94	97.523	Otolemur_garnettii
ENSFCAG00000032814	SRSF6	93	95.652	ENSOARG00000003117	SRSF6	94	95.679	Ovis_aries
ENSFCAG00000032814	SRSF6	90	83.923	ENSPPAG00000043131	-	100	86.174	Pan_paniscus
ENSFCAG00000032814	SRSF6	100	97.110	ENSPPAG00000034327	-	100	97.110	Pan_paniscus
ENSFCAG00000032814	SRSF6	100	100.000	ENSPPRG00000008917	SRSF6	100	100.000	Panthera_pardus
ENSFCAG00000032814	SRSF6	63	100.000	ENSPTIG00000019153	SRSF6	100	100.000	Panthera_tigris_altaica
ENSFCAG00000032814	SRSF6	90	83.923	ENSPTRG00000046274	-	100	86.174	Pan_troglodytes
ENSFCAG00000032814	SRSF6	100	97.110	ENSPTRG00000044686	-	100	97.110	Pan_troglodytes
ENSFCAG00000032814	SRSF6	100	97.391	ENSPANG00000035224	SRSF6	100	97.391	Papio_anubis
ENSFCAG00000032814	SRSF6	100	67.049	ENSPKIG00000018463	-	77	93.590	Paramormyrops_kingsleyae
ENSFCAG00000032814	SRSF6	52	74.586	ENSPKIG00000015703	-	95	60.403	Paramormyrops_kingsleyae
ENSFCAG00000032814	SRSF6	89	71.845	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSFCAG00000032814	SRSF6	54	94.624	ENSPCIG00000003820	SRSF6	58	96.154	Phascolarctos_cinereus
ENSFCAG00000032814	SRSF6	53	87.931	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSFCAG00000032814	SRSF6	87	63.522	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSFCAG00000032814	SRSF6	53	85.326	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSFCAG00000032814	SRSF6	100	97.399	ENSPPYG00000011019	SRSF6	100	97.399	Pongo_abelii
ENSFCAG00000032814	SRSF6	92	94.340	ENSPCAG00000010954	SRSF6	96	93.189	Procavia_capensis
ENSFCAG00000032814	SRSF6	100	98.261	ENSPCOG00000026364	SRSF6	100	98.261	Propithecus_coquereli
ENSFCAG00000032814	SRSF6	100	96.522	ENSPVAG00000015232	SRSF6	100	96.522	Pteropus_vampyrus
ENSFCAG00000032814	SRSF6	94	96.285	ENSRNOG00000006380	Srsf6	95	96.605	Rattus_norvegicus
ENSFCAG00000032814	SRSF6	100	95.652	ENSRBIG00000041414	SRSF6	100	95.652	Rhinopithecus_bieti
ENSFCAG00000032814	SRSF6	100	97.391	ENSRROG00000029989	SRSF6	100	97.391	Rhinopithecus_roxellana
ENSFCAG00000032814	SRSF6	93	69.470	ENSSBOG00000034078	-	54	76.243	Saimiri_boliviensis_boliviensis
ENSFCAG00000032814	SRSF6	100	96.532	ENSSBOG00000033708	-	100	96.532	Saimiri_boliviensis_boliviensis
ENSFCAG00000032814	SRSF6	54	94.624	ENSSHAG00000012805	SRSF6	55	95.745	Sarcophilus_harrisii
ENSFCAG00000032814	SRSF6	89	64.881	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSFCAG00000032814	SRSF6	53	80.769	ENSSMAG00000017447	-	55	80.435	Scophthalmus_maximus
ENSFCAG00000032814	SRSF6	53	88.108	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSFCAG00000032814	SRSF6	53	88.108	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSFCAG00000032814	SRSF6	75	98.062	ENSSARG00000001602	SRSF6	100	98.062	Sorex_araneus
ENSFCAG00000032814	SRSF6	53	93.989	ENSSPUG00000004967	SRSF6	94	88.235	Sphenodon_punctatus
ENSFCAG00000032814	SRSF6	76	70.677	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSFCAG00000032814	SRSF6	100	98.841	ENSSSCG00000007362	SRSF6	100	98.841	Sus_scrofa
ENSFCAG00000032814	SRSF6	93	85.185	ENSTGUG00000003455	SRSF6	94	70.642	Taeniopygia_guttata
ENSFCAG00000032814	SRSF6	87	70.530	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSFCAG00000032814	SRSF6	85	93.151	ENSTBEG00000013448	SRSF6	92	93.471	Tupaia_belangeri
ENSFCAG00000032814	SRSF6	75	98.456	ENSTTRG00000015410	SRSF6	100	98.456	Tursiops_truncatus
ENSFCAG00000032814	SRSF6	100	100.000	ENSUAMG00000003559	SRSF6	100	100.000	Ursus_americanus
ENSFCAG00000032814	SRSF6	63	100.000	ENSUMAG00000001154	SRSF6	100	100.000	Ursus_maritimus
ENSFCAG00000032814	SRSF6	83	100.000	ENSVPAG00000003016	SRSF6	83	100.000	Vicugna_pacos
ENSFCAG00000032814	SRSF6	53	86.885	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus