EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000033787 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 5255 bases
Position: chrD1:4684719-4689973
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000028027	RRM_1	PF00076.22	5.7e-20	1	2
ENSFCAP00000028027	RRM_1	PF00076.22	5.7e-20	2	2
ENSFCAP00000034064	RRM_1	PF00076.22	3.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000047819	-	354	-	ENSFCAP00000034064	117 (aa)	-	A0A2I2UNG9
ENSFCAT00000035239	-	549	-	ENSFCAP00000028027	182 (aa)	-	A0A2I2U6G0

Gene Model

Click here to download ENSFCAG00000033787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000033787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000033787	-	71	34.848	ENSFCAG00000028796	-	63	34.848
ENSFCAG00000033787	-	87	37.037	ENSFCAG00000027603	HNRNPAB	67	37.908
ENSFCAG00000033787	-	82	80.128	ENSFCAG00000041686	MSI2	90	79.775
ENSFCAG00000033787	-	71	37.405	ENSFCAG00000035826	-	63	37.405
ENSFCAG00000033787	-	70	38.298	ENSFCAG00000027765	HNRNPA2B1	51	34.091
ENSFCAG00000033787	-	74	31.944	ENSFCAG00000012001	-	62	31.944
ENSFCAG00000033787	-	88	31.481	ENSFCAG00000000050	TARDBP	51	31.481
ENSFCAG00000033787	-	70	39.623	ENSFCAG00000010150	HNRNPA1	83	37.037
ENSFCAG00000033787	-	77	37.113	ENSFCAG00000042916	RBM38	88	37.113
ENSFCAG00000033787	-	71	35.606	ENSFCAG00000042512	-	74	41.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000033787	-	82	80.128	ENSG00000153944	MSI2	86	86.364	Homo_sapiens
ENSFCAG00000033787	-	82	75.000	ENSAPOG00000001658	msi2a	51	75.000	Acanthochromis_polyacanthus
ENSFCAG00000033787	-	79	70.652	ENSAOCG00000014822	msi2a	65	73.529	Amphiprion_ocellaris
ENSFCAG00000033787	-	82	75.000	ENSATEG00000010498	msi2a	51	75.000	Anabas_testudineus
ENSFCAG00000033787	-	82	80.128	ENSANAG00000037827	MSI2	65	82.308	Aotus_nancymaae
ENSFCAG00000033787	-	82	75.000	ENSACLG00000007752	msi2a	51	75.000	Astatotilapia_calliptera
ENSFCAG00000033787	-	82	75.641	ENSAMXG00000032796	msi2a	57	75.641	Astyanax_mexicanus
ENSFCAG00000033787	-	82	77.564	ENSAMXG00000010474	msi2b	53	81.538	Astyanax_mexicanus
ENSFCAG00000033787	-	82	77.564	ENSBTAG00000004406	MSI2	58	77.564	Bos_taurus
ENSFCAG00000033787	-	76	56.944	WBGene00003423	msi-1	53	52.577	Caenorhabditis_elegans
ENSFCAG00000033787	-	82	80.128	ENSCJAG00000013998	MSI2	65	82.308	Callithrix_jacchus
ENSFCAG00000033787	-	69	82.353	ENSCAFG00020025620	MSI2	52	82.258	Canis_lupus_dingo
ENSFCAG00000033787	-	82	77.564	ENSCHIG00000016580	MSI2	57	77.564	Capra_hircus
ENSFCAG00000033787	-	67	70.909	ENSCPOG00000034042	MSI2	50	70.909	Cavia_porcellus
ENSFCAG00000033787	-	82	80.128	ENSCCAG00000033927	MSI2	65	82.308	Cebus_capucinus
ENSFCAG00000033787	-	76	78.621	ENSCATG00000040879	MSI2	65	82.308	Cercocebus_atys
ENSFCAG00000033787	-	97	65.909	ENSCLAG00000014325	MSI2	99	65.909	Chinchilla_lanigera
ENSFCAG00000033787	-	82	80.128	ENSCSAG00000005633	MSI2	57	80.128	Chlorocebus_sabaeus
ENSFCAG00000033787	-	67	80.000	ENSCPBG00000009942	MSI2	57	80.000	Chrysemys_picta_bellii
ENSFCAG00000033787	-	70	83.465	ENSCANG00000036414	MSI2	65	82.308	Colobus_angolensis_palliatus
ENSFCAG00000033787	-	92	71.930	ENSCGRG00001013330	Msi2	74	78.302	Cricetulus_griseus_chok1gshd
ENSFCAG00000033787	-	83	66.019	ENSCSEG00000003266	-	57	73.529	Cynoglossus_semilaevis
ENSFCAG00000033787	-	83	68.932	ENSCSEG00000013549	msi2a	77	75.000	Cynoglossus_semilaevis
ENSFCAG00000033787	-	82	75.000	ENSCVAG00000017075	msi2a	51	75.000	Cyprinodon_variegatus
ENSFCAG00000033787	-	82	76.923	ENSDARG00000032614	msi2b	100	85.106	Danio_rerio
ENSFCAG00000033787	-	67	81.897	ENSDNOG00000014501	MSI2	51	81.897	Dasypus_novemcinctus
ENSFCAG00000033787	-	60	87.156	ENSDORG00000028440	-	96	87.156	Dipodomys_ordii
ENSFCAG00000033787	-	73	64.748	FBgn0260943	Rbp6	52	69.231	Drosophila_melanogaster
ENSFCAG00000033787	-	82	80.128	ENSECAG00000011435	MSI2	60	80.128	Equus_caballus
ENSFCAG00000033787	-	85	73.457	ENSELUG00000001361	msi2b	80	78.676	Esox_lucius
ENSFCAG00000033787	-	82	76.923	ENSELUG00000011747	msi2a	55	81.538	Esox_lucius
ENSFCAG00000033787	-	82	75.000	ENSFHEG00000000084	msi2a	99	75.000	Fundulus_heteroclitus
ENSFCAG00000033787	-	83	71.845	ENSGMOG00000007596	-	100	75.000	Gadus_morhua
ENSFCAG00000033787	-	82	76.282	ENSGALG00000005567	MSI2	54	76.282	Gallus_gallus
ENSFCAG00000033787	-	80	76.974	ENSGAFG00000006974	msi2a	90	76.821	Gambusia_affinis
ENSFCAG00000033787	-	70	83.465	ENSGGOG00000013182	MSI2	65	82.308	Gorilla_gorilla
ENSFCAG00000033787	-	82	75.000	ENSHBUG00000020800	msi2a	73	78.519	Haplochromis_burtoni
ENSFCAG00000033787	-	89	73.636	ENSHGLG00000012444	MSI2	76	80.769	Heterocephalus_glaber_female
ENSFCAG00000033787	-	66	80.519	ENSHGLG00100004028	-	84	86.364	Heterocephalus_glaber_male
ENSFCAG00000033787	-	82	74.359	ENSIPUG00000021097	msi2a	61	74.359	Ictalurus_punctatus
ENSFCAG00000033787	-	82	76.923	ENSIPUG00000003732	msi2b	55	76.923	Ictalurus_punctatus
ENSFCAG00000033787	-	67	70.909	ENSSTOG00000007884	MSI2	50	70.909	Ictidomys_tridecemlineatus
ENSFCAG00000033787	-	60	87.156	ENSJJAG00000009467	-	96	87.156	Jaculus_jaculus
ENSFCAG00000033787	-	82	74.359	ENSKMAG00000009494	msi2a	52	70.874	Kryptolebias_marmoratus
ENSFCAG00000033787	-	82	75.000	ENSLBEG00000007061	msi2a	88	78.519	Labrus_bergylta
ENSFCAG00000033787	-	71	82.278	ENSLACG00000016798	MSI2	98	73.626	Latimeria_chalumnae
ENSFCAG00000033787	-	82	76.923	ENSLOCG00000004675	msi2b	99	68.852	Lepisosteus_oculatus
ENSFCAG00000033787	-	70	83.465	ENSMFAG00000003775	MSI2	65	82.308	Macaca_fascicularis
ENSFCAG00000033787	-	70	83.465	ENSMMUG00000002069	MSI2	65	82.308	Macaca_mulatta
ENSFCAG00000033787	-	82	80.128	ENSMNEG00000045275	MSI2	65	82.308	Macaca_nemestrina
ENSFCAG00000033787	-	70	83.465	ENSMLEG00000033888	MSI2	65	82.308	Mandrillus_leucophaeus
ENSFCAG00000033787	-	82	75.000	ENSMAMG00000010503	msi2a	88	75.524	Mastacembelus_armatus
ENSFCAG00000033787	-	85	73.292	ENSMAMG00000002488	-	99	77.483	Mastacembelus_armatus
ENSFCAG00000033787	-	82	75.000	ENSMZEG00005007676	msi2a	51	75.000	Maylandia_zebra
ENSFCAG00000033787	-	82	79.487	ENSMAUG00000003862	Msi2	54	79.487	Mesocricetus_auratus
ENSFCAG00000033787	-	82	80.128	ENSMICG00000013598	-	65	82.308	Microcebus_murinus
ENSFCAG00000033787	-	82	73.077	ENSMICG00000032913	-	65	69.000	Microcebus_murinus
ENSFCAG00000033787	-	82	79.487	ENSMOCG00000005820	Msi2	54	79.487	Microtus_ochrogaster
ENSFCAG00000033787	-	80	75.342	ENSMMOG00000008348	msi2a	90	75.342	Mola_mola
ENSFCAG00000033787	-	81	76.471	ENSMALG00000000071	msi2a	84	74.648	Monopterus_albus
ENSFCAG00000033787	-	82	79.487	MGP_CAROLIEiJ_G0016948	Msi2	96	87.156	Mus_caroli
ENSFCAG00000033787	-	92	71.930	ENSMUSG00000069769	Msi2	96	87.156	Mus_musculus
ENSFCAG00000033787	-	82	79.487	MGP_PahariEiJ_G0018079	Msi2	96	87.156	Mus_pahari
ENSFCAG00000033787	-	92	71.930	MGP_SPRETEiJ_G0017795	Msi2	96	87.156	Mus_spretus
ENSFCAG00000033787	-	82	79.487	ENSNGAG00000017807	Msi2	54	79.487	Nannospalax_galili
ENSFCAG00000033787	-	82	75.000	ENSNBRG00000014596	msi2a	92	76.974	Neolamprologus_brichardi
ENSFCAG00000033787	-	69	82.645	ENSNLEG00000008059	MSI2	70	82.645	Nomascus_leucogenys
ENSFCAG00000033787	-	82	80.128	ENSODEG00000011974	MSI2	54	80.128	Octodon_degus
ENSFCAG00000033787	-	89	70.175	ENSONIG00000001972	msi2a	95	70.175	Oreochromis_niloticus
ENSFCAG00000033787	-	82	75.000	ENSORLG00000009671	msi2a	51	75.000	Oryzias_latipes
ENSFCAG00000033787	-	82	75.000	ENSORLG00020021556	msi2a	51	75.000	Oryzias_latipes_hni
ENSFCAG00000033787	-	82	75.000	ENSORLG00015004592	msi2a	51	75.000	Oryzias_latipes_hsok
ENSFCAG00000033787	-	82	75.000	ENSOMEG00000000146	msi2a	51	75.000	Oryzias_melastigma
ENSFCAG00000033787	-	70	83.465	ENSPPAG00000037697	MSI2	65	82.308	Pan_paniscus
ENSFCAG00000033787	-	70	83.465	ENSPPRG00000001848	MSI2	65	82.308	Panthera_pardus
ENSFCAG00000033787	-	69	82.645	ENSPTIG00000021678	MSI2	61	82.645	Panthera_tigris_altaica
ENSFCAG00000033787	-	81	79.730	ENSPTIG00000021873	-	56	79.730	Panthera_tigris_altaica
ENSFCAG00000033787	-	70	83.465	ENSPTRG00000009437	MSI2	65	82.308	Pan_troglodytes
ENSFCAG00000033787	-	82	80.128	ENSPANG00000022319	MSI2	65	82.308	Papio_anubis
ENSFCAG00000033787	-	82	75.641	ENSPKIG00000007038	-	51	75.510	Paramormyrops_kingsleyae
ENSFCAG00000033787	-	73	72.527	ENSPKIG00000017107	-	81	72.527	Paramormyrops_kingsleyae
ENSFCAG00000033787	-	60	87.156	ENSPEMG00000021793	-	96	87.156	Peromyscus_maniculatus_bairdii
ENSFCAG00000033787	-	82	78.205	ENSPCIG00000006063	MSI2	53	78.205	Phascolarctos_cinereus
ENSFCAG00000033787	-	83	70.874	ENSPFOG00000019337	MSI2	91	73.333	Poecilia_formosa
ENSFCAG00000033787	-	83	70.874	ENSPLAG00000000436	msi2a	76	75.352	Poecilia_latipinna
ENSFCAG00000033787	-	83	68.041	ENSPMEG00000013247	msi2a	75	76.154	Poecilia_mexicana
ENSFCAG00000033787	-	71	84.800	ENSPCOG00000019195	-	93	84.800	Propithecus_coquereli
ENSFCAG00000033787	-	67	82.645	ENSPVAG00000017053	MSI2	52	82.645	Pteropus_vampyrus
ENSFCAG00000033787	-	82	75.000	ENSPNYG00000018393	msi2a	51	75.000	Pundamilia_nyererei
ENSFCAG00000033787	-	82	75.000	ENSPNAG00000014957	msi2a	57	75.000	Pygocentrus_nattereri
ENSFCAG00000033787	-	82	77.564	ENSPNAG00000000844	msi2b	55	76.000	Pygocentrus_nattereri
ENSFCAG00000033787	-	67	81.132	ENSRNOG00000025338	Msi2	50	81.132	Rattus_norvegicus
ENSFCAG00000033787	-	73	75.294	ENSRBIG00000032064	-	82	75.294	Rhinopithecus_bieti
ENSFCAG00000033787	-	71	87.156	ENSRROG00000034421	-	92	87.156	Rhinopithecus_roxellana
ENSFCAG00000033787	-	70	83.465	ENSSBOG00000026425	MSI2	65	82.308	Saimiri_boliviensis_boliviensis
ENSFCAG00000033787	-	70	83.465	ENSSHAG00000008672	MSI2	86	54.286	Sarcophilus_harrisii
ENSFCAG00000033787	-	70	77.165	ENSSFOG00015021687	-	57	77.165	Scleropages_formosus
ENSFCAG00000033787	-	82	75.000	ENSSMAG00000018484	msi2a	51	75.000	Scophthalmus_maximus
ENSFCAG00000033787	-	83	74.522	ENSSDUG00000021968	-	99	76.821	Seriola_dumerili
ENSFCAG00000033787	-	83	75.159	ENSSDUG00000014507	msi2a	82	78.519	Seriola_dumerili
ENSFCAG00000033787	-	82	75.000	ENSSLDG00000017172	msi2a	51	75.000	Seriola_lalandi_dorsalis
ENSFCAG00000033787	-	73	70.455	ENSSLDG00000021332	-	68	70.455	Seriola_lalandi_dorsalis
ENSFCAG00000033787	-	82	79.487	ENSSPUG00000000913	-	92	79.487	Sphenodon_punctatus
ENSFCAG00000033787	-	82	75.000	ENSSPAG00000017793	msi2a	51	75.000	Stegastes_partitus
ENSFCAG00000033787	-	82	80.128	ENSSSCG00000038505	MSI2	61	80.128	Sus_scrofa
ENSFCAG00000033787	-	82	75.000	ENSTRUG00000021248	msi2a	51	64.762	Takifugu_rubripes
ENSFCAG00000033787	-	70	83.465	ENSUAMG00000000700	MSI2	65	82.308	Ursus_americanus
ENSFCAG00000033787	-	67	81.132	ENSUMAG00000000505	MSI2	54	81.132	Ursus_maritimus
ENSFCAG00000033787	-	82	82.353	ENSVVUG00000011783	MSI2	82	82.258	Vulpes_vulpes
ENSFCAG00000033787	-	82	75.000	ENSXMAG00000000608	msi2a	51	75.000	Xiphophorus_maculatus